RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 TMEM215Q68D42 235 aa21.18■□□□□ 0.98
PDLIM4-206ENST00000474421 SMYD5Q6GMV2 418 aa21.18■□□□□ 0.98
PDLIM4-206ENST00000474421 BEND5Q7L4P6 421 aa21.18■□□□□ 0.98
PDLIM4-206ENST00000474421 SLC41A1Q8IVJ1 513 aa21.18■□□□□ 0.98
PDLIM4-206ENST00000474421 RGL4Q8IZJ4 473 aa21.18■□□□□ 0.98
PDLIM4-206ENST00000474421 CLEC4CQ8WTT0 213 aa21.18■□□□□ 0.98
PDLIM4-206ENST00000474421 MKRN2Q9H000 416 aaKnown RBP21.18■□□□□ 0.98
PDLIM4-206ENST00000474421 CAPN10Q9HC96 672 aa21.18■□□□□ 0.98
PDLIM4-206ENST00000474421 EPG5Q9HCE0 2579 aa21.18■□□□□ 0.98
PDLIM4-206ENST00000474421 CHD8Q9HCK8 2581 aa21.17■□□□□ 0.98
PDLIM4-206ENST00000474421 TYW5A2RUC4 315 aaKnown RBP21.17■□□□□ 0.98
PDLIM4-206ENST00000474421 ACSL4O60488 711 aa21.17■□□□□ 0.98
PDLIM4-206ENST00000474421 CALCAP01258 141 aa21.17■□□□□ 0.98
PDLIM4-206ENST00000474421 ATP5BP06576 529 aaKnown RBP21.17■□□□□ 0.98
PDLIM4-206ENST00000474421 EPHX1P07099 455 aa21.17■□□□□ 0.98
PDLIM4-206ENST00000474421 SYPP08247 313 aa21.17■□□□□ 0.98
PDLIM4-206ENST00000474421 ACADMP11310 421 aa21.17■□□□□ 0.98
PDLIM4-206ENST00000474421 PRKCHP24723 683 aa21.17■□□□□ 0.98
PDLIM4-206ENST00000474421 FNDC3BQ53EP0 1204 aaKnown RBP21.17■□□□□ 0.98
PDLIM4-206ENST00000474421 PIK3R6Q5UE93 754 aa21.17■□□□□ 0.98
PDLIM4-206ENST00000474421 CHST9Q7L1S5 443 aa21.17■□□□□ 0.98
PDLIM4-206ENST00000474421 SCUBE3Q8IX30 993 aa21.17■□□□□ 0.98
PDLIM4-206ENST00000474421 HDDC3Q8N4P3 179 aa21.17■□□□□ 0.98
PDLIM4-206ENST00000474421 SORCS1Q8WY21 1168 aa21.17■□□□□ 0.98
PDLIM4-206ENST00000474421 FAM149B1Q96BN6 582 aa21.17■□□□□ 0.98
PDLIM4-206ENST00000474421 TOE1Q96GM8 510 aaKnown RBP21.17■□□□□ 0.98
PDLIM4-206ENST00000474421 SLC32A1Q9H598 525 aa21.17■□□□□ 0.98
PDLIM4-206ENST00000474421 FBRSQ9HAH7 460 aa21.17■□□□□ 0.98
PDLIM4-206ENST00000474421 ABCB8Q9NUT2 735 aa21.17■□□□□ 0.98
PDLIM4-206ENST00000474421 WSB2Q9NYS7 404 aaPredicted RBP21.17■□□□□ 0.98
PDLIM4-206ENST00000474421 GGA2Q9UJY4 613 aa21.17■□□□□ 0.98
PDLIM4-206ENST00000474421 TLR6Q9Y2C9 796 aa21.17■□□□□ 0.98
PDLIM4-206ENST00000474421 NFE2L3Q9Y4A8 694 aa21.17■□□□□ 0.98
PDLIM4-206ENST00000474421 CACNA1BQ00975 2339 aa21.16■□□□□ 0.98
PDLIM4-206ENST00000474421 CACNA1EQ15878 2313 aa21.16■□□□□ 0.98
PDLIM4-206ENST00000474421 ADAMTS9Q9P2N4 1935 aa21.16■□□□□ 0.98
PDLIM4-206ENST00000474421 LETM1O95202 739 aaPredicted RBP21.16■□□□□ 0.98
PDLIM4-206ENST00000474421 IGLV3-19P01714 112 aa21.16■□□□□ 0.98
PDLIM4-206ENST00000474421 PABPC1P11940 636 aaKnown RBP21.16■□□□□ 0.98
PDLIM4-206ENST00000474421 GNA15P30679 374 aa21.16■□□□□ 0.98
PDLIM4-206ENST00000474421 TPMTP51580 245 aa21.16■□□□□ 0.98
PDLIM4-206ENST00000474421 CAMK4Q16566 473 aa21.16■□□□□ 0.98
PDLIM4-206ENST00000474421 TRIM65Q6PJ69 517 aa21.16■□□□□ 0.98
PDLIM4-206ENST00000474421 GBP6Q6ZN66 633 aa21.16■□□□□ 0.98
PDLIM4-206ENST00000474421 KIAA0907Q7Z7F0 614 aaPredicted RBP21.16■□□□□ 0.98
PDLIM4-206ENST00000474421 CREBRFQ8IUR6 639 aa21.16■□□□□ 0.98
PDLIM4-206ENST00000474421 CCDC117Q8IWD4 279 aaPredicted RBP21.16■□□□□ 0.98
PDLIM4-206ENST00000474421 MLKLQ8NB16 471 aa21.16■□□□□ 0.98
PDLIM4-206ENST00000474421 HJURPQ8NCD3 748 aaPredicted RBP21.16■□□□□ 0.98
PDLIM4-206ENST00000474421 CADM4Q8NFZ8 388 aa21.16■□□□□ 0.98
PDLIM4-206ENST00000474421 OR2T3Q8NH03 318 aa21.16■□□□□ 0.98
PDLIM4-206ENST00000474421 DQX1Q8TE96 717 aaKnown RBP21.16■□□□□ 0.98
PDLIM4-206ENST00000474421 ZNF606Q8WXB4 792 aa21.16■□□□□ 0.98
PDLIM4-206ENST00000474421 MED15Q96RN5 788 aa21.16■□□□□ 0.98
PDLIM4-206ENST00000474421 NUP58Q9BVL2 599 aa21.16■□□□□ 0.98
PDLIM4-206ENST00000474421 SLC4A5Q9BY07 1137 aa21.16■□□□□ 0.98
PDLIM4-206ENST00000474421 PCNX2A6NKB5 2137 aa21.15■□□□□ 0.98
PDLIM4-206ENST00000474421 UPK3BL1B0FP48 263 aa21.15■□□□□ 0.98
PDLIM4-206ENST00000474421 UPK3BL2E5RIL1 263 aa21.15■□□□□ 0.98
PDLIM4-206ENST00000474421 ARHGAP33O14559 1287 aa21.15■□□□□ 0.98
PDLIM4-206ENST00000474421 CAPN9O14815 690 aa21.15■□□□□ 0.98
PDLIM4-206ENST00000474421 THAP12O43422 761 aa21.15■□□□□ 0.98
PDLIM4-206ENST00000474421 TBL1XO60907 577 aa21.15■□□□□ 0.98
PDLIM4-206ENST00000474421 DLDP09622 509 aaKnown RBP21.15■□□□□ 0.98
PDLIM4-206ENST00000474421 COPAP53621 1224 aa21.15■□□□□ 0.98
PDLIM4-206ENST00000474421 CAMK2GQ13555 558 aaPredicted RBP21.15■□□□□ 0.98
PDLIM4-206ENST00000474421 FAM133BQ5BKY9 247 aaKnown RBP21.15■□□□□ 0.98
PDLIM4-206ENST00000474421 DENND1BQ6P3S1 775 aa21.15■□□□□ 0.98
PDLIM4-206ENST00000474421 RFWD3Q6PCD5 774 aa21.15■□□□□ 0.98
PDLIM4-206ENST00000474421 ADIPOR2Q86V24 386 aa21.15■□□□□ 0.98
PDLIM4-206ENST00000474421 CRACR2AQ9BSW2 395 aa21.15■□□□□ 0.98
PDLIM4-206ENST00000474421 GTPBP2Q9BX10 602 aaKnown RBP21.15■□□□□ 0.98
PDLIM4-206ENST00000474421 TMEM245Q9H330 911 aa21.15■□□□□ 0.98
PDLIM4-206ENST00000474421 CD93Q9NPY3 652 aa21.15■□□□□ 0.98
PDLIM4-206ENST00000474421 APEX2Q9UBZ4 518 aa21.15■□□□□ 0.98
PDLIM4-206ENST00000474421 PCDH15Q96QU1 1955 aa21.14■□□□□ 0.98
PDLIM4-206ENST00000474421 GTPBP10A4D1E9 387 aaKnown RBP21.14■□□□□ 0.97
PDLIM4-206ENST00000474421 MEI4A8MW99 385 aa21.14■□□□□ 0.97
PDLIM4-206ENST00000474421 GIPC1O14908 333 aa21.14■□□□□ 0.97
PDLIM4-206ENST00000474421 OPHN1O60890 802 aa21.14■□□□□ 0.97
PDLIM4-206ENST00000474421 FYNP06241 537 aa21.14■□□□□ 0.97
PDLIM4-206ENST00000474421 POLR2EP19388 210 aaKnown RBP21.14■□□□□ 0.97
PDLIM4-206ENST00000474421 SGSHP51688 502 aa21.14■□□□□ 0.97
PDLIM4-206ENST00000474421 ZNF252P-AS1Q0IIN9 211 aa21.14■□□□□ 0.97
PDLIM4-206ENST00000474421 EXOC3L4Q17RC7 722 aa21.14■□□□□ 0.97
PDLIM4-206ENST00000474421 PLEKHG6Q3KR16 790 aa21.14■□□□□ 0.97
PDLIM4-206ENST00000474421 MBLAC2Q68D91 279 aa21.14■□□□□ 0.97
PDLIM4-206ENST00000474421 TMEM110Q86TL2 294 aa21.14■□□□□ 0.97
PDLIM4-206ENST00000474421 MFN1Q8IWA4 741 aa21.14■□□□□ 0.97
PDLIM4-206ENST00000474421 CYB5D2Q8WUJ1 264 aa21.14■□□□□ 0.97
PDLIM4-206ENST00000474421 DNASE2BQ8WZ79 361 aa21.14■□□□□ 0.97
PDLIM4-206ENST00000474421 FCRL2Q96LA5 508 aaPredicted RBP21.14■□□□□ 0.97
PDLIM4-206ENST00000474421 GPR174Q9BXC1 333 aa21.14■□□□□ 0.97
PDLIM4-206ENST00000474421 PCED1AQ9H1Q7 454 aa21.14■□□□□ 0.97
PDLIM4-206ENST00000474421 CHMP5Q9NZZ3 219 aa21.14■□□□□ 0.97
PDLIM4-206ENST00000474421 NAALADL1Q9UQQ1 740 aa21.14■□□□□ 0.97
PDLIM4-206ENST00000474421 GOLGA6L7A0A1B0GV03 622 aa21.13■□□□□ 0.97
PDLIM4-206ENST00000474421 APOEP02649 317 aa21.13■□□□□ 0.97
PDLIM4-206ENST00000474421 SLC6A4P31645 630 aa21.13■□□□□ 0.97
PDLIM4-206ENST00000474421 TPD52L1Q16890 204 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms