RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 CDK17Q00537 523 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 SLC6A3Q01959 620 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 CREB5Q02930 508 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 ARID5AQ03989 594 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 EIF4EBP2Q13542 120 aaPredicted RBP11.61□□□□□ -0.55
CKS1B-206ENST00000474215 ZNF234Q14588 700 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 SF3A2Q15428 464 aaKnown RBP11.61□□□□□ -0.55
CKS1B-206ENST00000474215 CCDC6Q16204 474 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 ZC3H12AQ5D1E8 599 aaKnown RBP11.61□□□□□ -0.55
CKS1B-206ENST00000474215 PMS2CLQ68D20 193 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 RNF43Q68DV7 783 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 OR6B2Q6IFH4 312 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 FAM183BPQ6ZVS7 135 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 LPCAT2Q7L5N7 544 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 KIAA0907Q7Z7F0 614 aaPredicted RBP11.61□□□□□ -0.55
CKS1B-206ENST00000474215 ZDHHC17Q8IUH5 632 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 DEFB106AQ8N104 65 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 FRMD1Q8N878 549 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 HJURPQ8NCD3 748 aaPredicted RBP11.61□□□□□ -0.55
CKS1B-206ENST00000474215 ANKRD20A12PQ8NF67 263 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 WFIKKN2Q8TEU8 576 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 SORCS1Q8WY21 1168 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 DDX1Q92499 740 aaKnown RBP11.61□□□□□ -0.55
CKS1B-206ENST00000474215 ERLEC1Q96DZ1 483 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 BTN2A3PQ96KV6 586 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 SLC2A13Q96QE2 648 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 SYNCQ9H7C4 482 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 VPS45Q9NRW7 570 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 ABCB8Q9NUT2 735 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.61□□□□□ -0.55
CKS1B-206ENST00000474215 CALCOCO1Q9P1Z2 691 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 LIMA1Q9UHB6 759 aaKnown RBP11.61□□□□□ -0.55
CKS1B-206ENST00000474215 MBD1Q9UIS9 605 aaPredicted RBP11.61□□□□□ -0.55
CKS1B-206ENST00000474215 CDV3Q9UKY7 258 aaKnown RBP11.61□□□□□ -0.55
CKS1B-206ENST00000474215 PLA2G4CQ9UP65 541 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 RAD54BQ9Y620 910 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.6□□□□□ -0.55
CKS1B-206ENST00000474215 KCNU1A8MYU2 1149 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 SYNCRIPO60506 623 aaKnown RBP11.6□□□□□ -0.55
CKS1B-206ENST00000474215 ZNF217O75362 1048 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 GRAP2O75791 330 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 MOCS2O96007 188 aaPredicted RBP11.6□□□□□ -0.55
CKS1B-206ENST00000474215 NDUFV2P19404 249 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 CDK11BP21127 795 aaKnown RBP11.6□□□□□ -0.55
CKS1B-206ENST00000474215 CDH5P33151 784 aaPredicted RBP11.6□□□□□ -0.55
CKS1B-206ENST00000474215 IL12RB1P42701 662 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 DHPSP49366 369 aaPredicted RBP11.6□□□□□ -0.55
CKS1B-206ENST00000474215 KLK7P49862 253 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 COPB1P53618 953 aaKnown RBP11.6□□□□□ -0.55
CKS1B-206ENST00000474215 POLR2FP61218 127 aaKnown RBP11.6□□□□□ -0.55
CKS1B-206ENST00000474215 RPS24P62847 133 aaKnown RBP11.6□□□□□ -0.55
CKS1B-206ENST00000474215 PITX1P78337 314 aaPredicted RBP11.6□□□□□ -0.55
CKS1B-206ENST00000474215 STARD3Q14849 445 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 FUT11Q495W5 492 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 PTPN20Q4JDL3 420 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 MS4A13Q5J8X5 152 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 SPDYCQ5MJ68 293 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 OLFML1Q6UWY5 402 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 CHST9Q7L1S5 443 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 SLC26A9Q7LBE3 791 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 ERMP1Q7Z2K6 904 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 NOP9Q86U38 636 aaKnown RBP11.6□□□□□ -0.55
CKS1B-206ENST00000474215 ADIPOR2Q86V24 386 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 TMEFF1Q8IYR6 380 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 AHI1Q8N157 1196 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.6□□□□□ -0.55
CKS1B-206ENST00000474215 ZNF557Q8N988 423 aaPredicted RBP11.6□□□□□ -0.55
CKS1B-206ENST00000474215 C12orf50Q8NA57 414 aaPredicted RBP11.6□□□□□ -0.55
CKS1B-206ENST00000474215 FIBINQ8TAL6 211 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 MRGPRX1Q96LB2 322 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 NAT10Q9H0A0 1025 aaKnown RBP11.6□□□□□ -0.55
CKS1B-206ENST00000474215 GANQ9H2C0 597 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 FAM204AQ9H8W3 233 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 FAM207AQ9NSI2 230 aaPredicted RBP11.6□□□□□ -0.55
CKS1B-206ENST00000474215 DDIT4Q9NX09 232 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 TMEM63CQ9P1W3 806 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 STIM2Q9P246 746 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 SLC12A6Q9UHW9 1150 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 XPO7Q9UIA9 1087 aaKnown RBP11.6□□□□□ -0.55
CKS1B-206ENST00000474215 GGA2Q9UJY4 613 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 DAAM1Q9Y4D1 1078 aa11.6□□□□□ -0.55
CKS1B-206ENST00000474215 EML5Q05BV3 1969 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 TYW5A2RUC4 315 aaKnown RBP11.59□□□□□ -0.55
CKS1B-206ENST00000474215 GDF9O60383 454 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 LSM8O95777 96 aaKnown RBP11.59□□□□□ -0.55
CKS1B-206ENST00000474215 CAVIN2O95810 425 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 ATP5BP06576 529 aaKnown RBP11.59□□□□□ -0.55
CKS1B-206ENST00000474215 PABPC1P11940 636 aaKnown RBP11.59□□□□□ -0.55
CKS1B-206ENST00000474215 ZNF18P17022 549 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 ABCB4P21439 1286 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 CCR1P32246 355 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 CD70P32970 193 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 NOS2P35228 1153 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 GABRB2P47870 512 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 FOXK2Q01167 660 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 TYRO3Q06418 890 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 NCAPHQ15003 741 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 SYCP1Q15431 976 aa11.59□□□□□ -0.55
CKS1B-206ENST00000474215 TAF3Q5VWG9 929 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms