RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 RPIAP49247 311 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 KIF11P52732 1056 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 NDST1P52848 882 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 CLDN6P56747 220 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 SNRPFP62306 86 aaKnown RBP5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 ASIC1P78348 528 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 CLDN10P78369 228 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 IL9RQ01113 521 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 SEMG2Q02383 582 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 EHHADHQ08426 723 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 BIRC3Q13489 604 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 E2F5Q15329 346 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 TEAD4Q15561 434 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 BMT2Q1RMZ1 405 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 INAVAQ3KP66 663 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 C8orf34Q49A92 452 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 PKDCCQ504Y2 493 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 FAM26FQ5R3K3 315 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 ZNF787Q6DD87 383 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 FAM173BQ6P4H8 233 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 CNNM4Q6P4Q7 775 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 BRICD5Q6PL45 260 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 PCSK4Q6UW60 755 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 SERPINA13PQ6UXR4 307 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 CCDC186Q7Z3E2 898 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 SCD5Q86SK9 330 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 LURAP1LQ8IV03 231 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 NELFCDQ8IXH7 590 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 C12orf56Q8IXR9 622 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 CRYBG2Q8N1P7 616 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 ZNF843Q8N446 348 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 ZNF276Q8N554 614 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 PDILTQ8N807 584 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 SNIP1Q8TAD8 396 aaKnown RBP5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 PARD3BQ8TEW8 1205 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 UCMAQ8WVF2 138 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 JAKMIP2Q96AA8 810 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 BIRC7Q96CA5 298 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 WBP1Q96G27 269 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 FCRL3Q96P31 734 aaPredicted RBP5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 HNRNPABQ99729 332 aaKnown RBP5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 CIPCQ9C0C6 399 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 LHX5Q9H2C1 402 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 TMEM245Q9H330 911 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 PNPLA8Q9NP80 782 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 KBTBD4Q9NVX7 518 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 CLIC5Q9NZA1 410 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 FTSJ1Q9UET6 329 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 NAGPAQ9UK23 515 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 AGO1Q9UL18 857 aaKnown RBP5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 ZNF510Q9Y2H8 683 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 PCDHGA1Q9Y5H4 931 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 PCDHA5Q9Y5H7 936 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 COL5A1P20908 1838 aaPredicted RBP5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 UBE4BO95155 1302 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 TMEM131Q92545 1883 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 TLN1Q9Y490 2541 aaKnown RBP5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 LRRK2Q5S007 2527 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 MYH10P35580 1976 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 A0A1B0GTQ1 180 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 CYSRT1A8MQ03 144 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 CBX4O00257 560 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 ENC1O14682 589 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 STX6O43752 255 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 EXOC3O60645 756 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 RFPL3O75679 317 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 CLSTN1O94985 981 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 ASS1P00966 412 aaKnown RBP5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 CYBBP04839 570 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 IGHV4-34P06331 123 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 HMBSP08397 361 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 P4HA1P13674 534 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 JUPP14923 745 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 HOXD9P28356 352 aaPredicted RBP5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 HLA-FP30511 346 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 HNF1BP35680 557 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 ACADVLP49748 655 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 AP3M2P53677 418 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 BCAT1P54687 386 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 RPS14P62263 151 aaKnown RBP5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 COG7P83436 770 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 CEBPZQ03701 1054 aaKnown RBP5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 ZBTB16Q05516 673 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 INCA1Q0VD86 236 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 TARDBPQ13148 414 aaKnown RBP eCLIP5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 DNAJC3Q13217 504 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 RTP5Q14D33 572 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 SLC39A14Q15043 492 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 ZACNQ401N2 412 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 MSS51Q4VC12 460 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 C6orf118Q5T5N4 469 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 SPOPLQ6IQ16 392 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 ADAT2Q7Z6V5 191 aaKnown RBP5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 TADA2BQ86TJ2 420 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 UNC93AQ86WB7 457 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 DENND1CQ8IV53 801 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 FAM217AQ8IXS0 508 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 CPXM2Q8N436 756 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 ZNF366Q8N895 744 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 CYB5D2Q8WUJ1 264 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms