RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 AGGF1Q8N302 714 aaeCLIP18.59■□□□□ 0.57
VARS2-206ENST00000473916 ARMC5Q96C12 935 aa18.59■□□□□ 0.57
VARS2-206ENST00000473916 TMEM109Q9BVC6 243 aa18.59■□□□□ 0.57
VARS2-206ENST00000473916 PRDM12Q9H4Q4 367 aa18.59■□□□□ 0.57
VARS2-206ENST00000473916 NEU3Q9UQ49 428 aa18.59■□□□□ 0.57
VARS2-206ENST00000473916 CLUHO75153 1309 aa18.58■□□□□ 0.57
VARS2-206ENST00000473916 WDR27A2RRH5 827 aa18.58■□□□□ 0.56
VARS2-206ENST00000473916 ALOX15BO15296 676 aa18.58■□□□□ 0.56
VARS2-206ENST00000473916 ACRP10323 421 aa18.58■□□□□ 0.56
VARS2-206ENST00000473916 ACTN2P35609 894 aa18.58■□□□□ 0.56
VARS2-206ENST00000473916 GPX6P59796 221 aa18.58■□□□□ 0.56
VARS2-206ENST00000473916 ELAVL2Q12926 359 aaKnown RBP18.58■□□□□ 0.56
VARS2-206ENST00000473916 BBS9Q3SYG4 887 aa18.58■□□□□ 0.56
VARS2-206ENST00000473916 HEATR6Q6AI08 1181 aaKnown RBP18.58■□□□□ 0.56
VARS2-206ENST00000473916 BEND5Q7L4P6 421 aa18.58■□□□□ 0.56
VARS2-206ENST00000473916 IGDCC3Q8IVU1 814 aa18.58■□□□□ 0.56
VARS2-206ENST00000473916 GIPC2Q8TF65 315 aa18.58■□□□□ 0.56
VARS2-206ENST00000473916 DEPDC1BQ8WUY9 529 aa18.58■□□□□ 0.56
VARS2-206ENST00000473916 HTR3CQ8WXA8 447 aa18.58■□□□□ 0.56
VARS2-206ENST00000473916 ARHGEF38Q9NXL2 777 aa18.58■□□□□ 0.56
VARS2-206ENST00000473916 KIAA1671Q9BY89 1806 aa18.58■□□□□ 0.56
VARS2-206ENST00000473916 RGS16O15492 202 aaPredicted RBP18.57■□□□□ 0.56
VARS2-206ENST00000473916 PIAS1O75925 651 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 TBX18O95935 607 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 MOCS2O96007 188 aaPredicted RBP18.57■□□□□ 0.56
VARS2-206ENST00000473916 SRGAP2BP0DMP2 458 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 HSPA8P11142 646 aaKnown RBP18.57■□□□□ 0.56
VARS2-206ENST00000473916 ARL4CP56559 192 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 GUCY1A3Q02108 690 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 PRKD1Q15139 912 aaPredicted RBP18.57■□□□□ 0.56
VARS2-206ENST00000473916 ARTNQ5T4W7 220 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 DENND5BQ6ZUT9 1274 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 ANKS3Q6ZW76 656 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 CCNYQ8ND76 341 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 PGM2Q96G03 612 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 IGSF21Q96ID5 467 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 PSD3Q9NYI0 1048 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 PAGE1O75459 146 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 GCATO75600 419 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 APRTP07741 180 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 CAPN2P17655 700 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 ATF6P18850 670 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 EPHB2P29323 1055 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 SKOR1P84550 965 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 RASIP1Q5U651 963 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 MON1AQ86VX9 555 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 FBXO22Q8NEZ5 403 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 TOP1MTQ969P6 601 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 P2RY11Q96G91 374 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 TRIM62Q9BVG3 475 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 VPS37BQ9H9H4 285 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 SEPT10Q9P0V9 454 aa18.57■□□□□ 0.56
VARS2-206ENST00000473916 CHADO15335 359 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 HAPLN1P10915 354 aaPredicted RBP18.56■□□□□ 0.56
VARS2-206ENST00000473916 SSTR1P30872 391 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 TAF10Q12962 218 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 SPOUT1Q5T280 376 aaKnown RBP18.56■□□□□ 0.56
VARS2-206ENST00000473916 RNF168Q8IYW5 571 aaPredicted RBP18.56■□□□□ 0.56
VARS2-206ENST00000473916 CYP4X1Q8N118 509 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 DNAJC5GQ8N7S2 189 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 FBXO36Q8NEA4 188 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 FBXO32Q969P5 355 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 CELF6Q96J87 481 aaKnown RBP18.56■□□□□ 0.56
VARS2-206ENST00000473916 EPAS1Q99814 870 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 CAPS2Q9BXY5 557 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 FBXO44Q9H4M3 255 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 IL37Q9NZH6 218 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 C5orf60A6NFR6 353 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 E7ESA3 106 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 H7C4K7 107 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 KCNK1O00180 336 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 RNF103O00237 685 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 YWHAQP27348 245 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 GCAP28676 217 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 OR1D2P34982 312 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 GNGT1P63211 74 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 EFTUD2Q15029 972 aaKnown RBP eCLIP18.56■□□□□ 0.564e-7■■■■■ 40.4
VARS2-206ENST00000473916 PSMD5Q16401 504 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 C6orf118Q5T5N4 469 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 RWDD4Q6NW29 188 aaKnown RBP18.56■□□□□ 0.56
VARS2-206ENST00000473916 SPPL2BQ8TCT7 592 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 SERPINB12Q96P63 405 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 RC3H2Q9HBD1 1191 aaKnown RBP18.56■□□□□ 0.56
VARS2-206ENST00000473916 TBK1Q9UHD2 729 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 CHMP2BQ9UQN3 213 aa18.56■□□□□ 0.56
VARS2-206ENST00000473916 NYNRINQ9P2P1 1898 aaKnown RBP18.55■□□□□ 0.56
VARS2-206ENST00000473916 HACD1B0YJ81 288 aa18.55■□□□□ 0.56
VARS2-206ENST00000473916 SHOX2O60902 331 aaPredicted RBP18.55■□□□□ 0.56
VARS2-206ENST00000473916 TIMP1P01033 207 aa18.55■□□□□ 0.56
VARS2-206ENST00000473916 CCR1P32246 355 aa18.55■□□□□ 0.56
VARS2-206ENST00000473916 GRIA1P42261 906 aa18.55■□□□□ 0.56
VARS2-206ENST00000473916 HCAR3P49019 387 aa18.55■□□□□ 0.56
VARS2-206ENST00000473916 LBX1P52954 281 aa18.55■□□□□ 0.56
VARS2-206ENST00000473916 WASHC5Q12768 1159 aa18.55■□□□□ 0.56
VARS2-206ENST00000473916 EFEMP1Q12805 493 aa18.55■□□□□ 0.56
VARS2-206ENST00000473916 USP41Q3LFD5 358 aa18.55■□□□□ 0.56
VARS2-206ENST00000473916 TNFAIP8L3Q5GJ75 292 aa18.55■□□□□ 0.56
VARS2-206ENST00000473916 ANKRD20A2Q5SQ80 823 aa18.55■□□□□ 0.56
VARS2-206ENST00000473916 ANKRD20A1Q5TYW2 823 aa18.55■□□□□ 0.56
VARS2-206ENST00000473916 ANKRD20A3Q5VUR7 823 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms