RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 NME3Q13232 169 aa19.65■□□□□ 0.74
PTCD3-210ENST00000473829 RNF43Q68DV7 783 aa19.65■□□□□ 0.74
PTCD3-210ENST00000473829 LRSAM1Q6UWE0 723 aa19.65■□□□□ 0.74
PTCD3-210ENST00000473829 ZNF513Q8N8E2 541 aaPredicted RBP19.65■□□□□ 0.74
PTCD3-210ENST00000473829 MSANTD4Q8NCY6 345 aa19.65■□□□□ 0.74
PTCD3-210ENST00000473829 TMA16Q96EY4 203 aaKnown RBP19.65■□□□□ 0.74
PTCD3-210ENST00000473829 ACOX2Q99424 681 aa19.65■□□□□ 0.74
PTCD3-210ENST00000473829 TSPY26PQ9H489 355 aa19.65■□□□□ 0.74
PTCD3-210ENST00000473829 METTL5Q9NRN9 209 aaKnown RBP19.65■□□□□ 0.74
PTCD3-210ENST00000473829 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.65■□□□□ 0.74
PTCD3-210ENST00000473829 TMEM59LQ9UK28 342 aa19.65■□□□□ 0.74
PTCD3-210ENST00000473829 STARD13Q9Y3M8 1113 aa19.65■□□□□ 0.74
PTCD3-210ENST00000473829 MUC22E2RYF6 1773 aaPredicted RBP19.65■□□□□ 0.74
PTCD3-210ENST00000473829 KCNU1A8MYU2 1149 aa19.64■□□□□ 0.73
PTCD3-210ENST00000473829 M0QYT0 321 aa19.64■□□□□ 0.73
PTCD3-210ENST00000473829 GFRA3O60609 400 aa19.64■□□□□ 0.73
PTCD3-210ENST00000473829 GJB6O95452 261 aa19.64■□□□□ 0.73
PTCD3-210ENST00000473829 SULT1E1P49888 294 aa19.64■□□□□ 0.73
PTCD3-210ENST00000473829 RPS24P62847 133 aaKnown RBP19.64■□□□□ 0.73
PTCD3-210ENST00000473829 CRY1Q16526 586 aa19.64■□□□□ 0.73
PTCD3-210ENST00000473829 MS4A13Q5J8X5 152 aa19.64■□□□□ 0.73
PTCD3-210ENST00000473829 RAP1GAP2Q684P5 730 aa19.64■□□□□ 0.73
PTCD3-210ENST00000473829 TMEM215Q68D42 235 aa19.64■□□□□ 0.73
PTCD3-210ENST00000473829 WDR5BQ86VZ2 330 aa19.64■□□□□ 0.73
PTCD3-210ENST00000473829 LONP2Q86WA8 852 aa19.64■□□□□ 0.73
PTCD3-210ENST00000473829 SUMF1Q8NBK3 374 aa19.64■□□□□ 0.73
PTCD3-210ENST00000473829 NT5C3BQ969T7 300 aa19.64■□□□□ 0.73
PTCD3-210ENST00000473829 BTN2A3PQ96KV6 586 aa19.64■□□□□ 0.73
PTCD3-210ENST00000473829 PIGVQ9NUD9 493 aa19.64■□□□□ 0.73
PTCD3-210ENST00000473829 SEPT11Q9NVA2 429 aaKnown RBP19.64■□□□□ 0.73
PTCD3-210ENST00000473829 IFNKQ9P0W0 207 aa19.64■□□□□ 0.73
PTCD3-210ENST00000473829 HRO43593 1189 aa19.63■□□□□ 0.73
PTCD3-210ENST00000473829 TBL1XO60907 577 aa19.63■□□□□ 0.73
PTCD3-210ENST00000473829 HLA-FP30511 346 aa19.63■□□□□ 0.73
PTCD3-210ENST00000473829 WASP42768 502 aa19.63■□□□□ 0.73
PTCD3-210ENST00000473829 HSF5Q4G112 596 aaPredicted RBP19.63■□□□□ 0.73
PTCD3-210ENST00000473829 FIGNQ5HY92 759 aa19.63■□□□□ 0.73
PTCD3-210ENST00000473829 ANKS1BQ7Z6G8 1248 aa19.63■□□□□ 0.73
PTCD3-210ENST00000473829 PHF13Q86YI8 300 aaPredicted RBP19.63■□□□□ 0.73
PTCD3-210ENST00000473829 CAMKK1Q8N5S9 505 aa19.63■□□□□ 0.73
PTCD3-210ENST00000473829 EMC1Q8N766 993 aa19.63■□□□□ 0.73
PTCD3-210ENST00000473829 TBCBQ99426 244 aa19.63■□□□□ 0.73
PTCD3-210ENST00000473829 PRMT1Q99873 361 aaKnown RBP19.63■□□□□ 0.73
PTCD3-210ENST00000473829 SLC2A11Q9BYW1 496 aa19.63■□□□□ 0.73
PTCD3-210ENST00000473829 EPC1Q9H2F5 836 aa19.63■□□□□ 0.73
PTCD3-210ENST00000473829 ANLNQ9NQW6 1124 aa19.63■□□□□ 0.73
PTCD3-210ENST00000473829 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.63■□□□□ 0.73
PTCD3-210ENST00000473829 I6L893 689 aaPredicted RBP19.62■□□□□ 0.73
PTCD3-210ENST00000473829 APBB3O95704 486 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 TACR2P21452 398 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 CCR1P32246 355 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 GBP1P32455 592 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 GGCXP38435 758 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 NSFP46459 744 aaKnown RBP19.62■□□□□ 0.73
PTCD3-210ENST00000473829 ATXN1P54253 815 aaKnown RBP19.62■□□□□ 0.73
PTCD3-210ENST00000473829 ASIC2Q16515 512 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 EOGTQ5NDL2 527 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 MPP7Q5T2T1 576 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 NUDT18Q6ZVK8 323 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 MON1BQ7L1V2 547 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 CHSY1Q86X52 802 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 LGI2Q8N0V4 545 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 CFAP52Q8N1V2 620 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 ATP6V0D2Q8N8Y2 350 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 HJURPQ8NCD3 748 aaPredicted RBP19.62■□□□□ 0.73
PTCD3-210ENST00000473829 TSTD1Q8NFU3 115 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 JOSD2Q8TAC2 188 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 KCNV2Q8TDN2 545 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 RNF34Q969K3 372 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 CFAP57Q96MR6 1250 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 IRX2Q9BZI1 471 aaPredicted RBP19.62■□□□□ 0.73
PTCD3-210ENST00000473829 SEMA4AQ9H3S1 761 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 ABCB8Q9NUT2 735 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 TAS2R14Q9NYV8 317 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 AIPL1Q9NZN9 384 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 STIM2Q9P246 746 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 STAP1Q9ULZ2 295 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 GPR179Q6PRD1 2367 aa19.62■□□□□ 0.73
PTCD3-210ENST00000473829 ADCY5O95622 1261 aa19.61■□□□□ 0.73
PTCD3-210ENST00000473829 LMNAP02545 664 aaKnown RBP19.61■□□□□ 0.73
PTCD3-210ENST00000473829 GSCP56915 257 aaPredicted RBP19.61■□□□□ 0.73
PTCD3-210ENST00000473829 SLC25A52Q3SY17 297 aa19.61■□□□□ 0.73
PTCD3-210ENST00000473829 RAB6CQ53S08 254 aa19.61■□□□□ 0.73
PTCD3-210ENST00000473829 SFMBT2Q5VUG0 894 aa19.61■□□□□ 0.73
PTCD3-210ENST00000473829 ANO7Q6IWH7 933 aa19.61■□□□□ 0.73
PTCD3-210ENST00000473829 ARCQ7LC44 396 aa19.61■□□□□ 0.73
PTCD3-210ENST00000473829 ZNF571Q7Z3V5 609 aaPredicted RBP19.61■□□□□ 0.73
PTCD3-210ENST00000473829 BNIPLQ7Z465 357 aa19.61■□□□□ 0.73
PTCD3-210ENST00000473829 RNF214Q8ND24 703 aa19.61■□□□□ 0.73
PTCD3-210ENST00000473829 MDGA1Q8NFP4 955 aa19.61■□□□□ 0.73
PTCD3-210ENST00000473829 SORCS1Q8WY21 1168 aa19.61■□□□□ 0.73
PTCD3-210ENST00000473829 ERLEC1Q96DZ1 483 aa19.61■□□□□ 0.73
PTCD3-210ENST00000473829 PGAP3Q96FM1 320 aaPredicted RBP19.61■□□□□ 0.73
PTCD3-210ENST00000473829 DDX50Q9BQ39 737 aaKnown RBP19.61■□□□□ 0.73
PTCD3-210ENST00000473829 EDEM3Q9BZQ6 932 aa19.61■□□□□ 0.73
PTCD3-210ENST00000473829 XPO4Q9C0E2 1151 aaKnown RBP19.61■□□□□ 0.73
PTCD3-210ENST00000473829 RAB6CQ9H0N0 254 aa19.61■□□□□ 0.73
PTCD3-210ENST00000473829 HAUS4Q9H6D7 363 aa19.61■□□□□ 0.73
PTCD3-210ENST00000473829 CACNA2D2Q9NY47 1150 aa19.61■□□□□ 0.73
PTCD3-210ENST00000473829 RRN3Q9NYV6 651 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms