RNA–Protein interactions for RNA: ENST00000473405.1

CCDC88B-206, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best)

Gene CCDC88B, Length 783 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-206ENST00000473405 NUGGCQ68CJ6 796 aa19.56■□□□□ 0.72
CCDC88B-206ENST00000473405 NADSYN1Q6IA69 706 aa19.56■□□□□ 0.72
CCDC88B-206ENST00000473405 DENND1BQ6P3S1 775 aa19.56■□□□□ 0.72
CCDC88B-206ENST00000473405 RFWD3Q6PCD5 774 aa19.56■□□□□ 0.72
CCDC88B-206ENST00000473405 SERPINA13PQ6UXR4 307 aa19.56■□□□□ 0.72
CCDC88B-206ENST00000473405 RABEPKQ7Z6M1 372 aa19.56■□□□□ 0.72
CCDC88B-206ENST00000473405 ADIPOR2Q86V24 386 aa19.56■□□□□ 0.72
CCDC88B-206ENST00000473405 TMPRSS6Q8IU80 811 aa19.56■□□□□ 0.72
CCDC88B-206ENST00000473405 SCUBE3Q8IX30 993 aa19.56■□□□□ 0.72
CCDC88B-206ENST00000473405 TMA16Q96EY4 203 aaKnown RBP19.56■□□□□ 0.72
CCDC88B-206ENST00000473405 TOE1Q96GM8 510 aaKnown RBP19.56■□□□□ 0.72
CCDC88B-206ENST00000473405 PRICKLE1Q96MT3 831 aaPredicted RBP19.56■□□□□ 0.72
CCDC88B-206ENST00000473405 MED15Q96RN5 788 aa19.56■□□□□ 0.72
CCDC88B-206ENST00000473405 MIS12Q9H081 205 aa19.56■□□□□ 0.72
CCDC88B-206ENST00000473405 TMEM245Q9H330 911 aa19.56■□□□□ 0.72
CCDC88B-206ENST00000473405 ITM2CQ9NQX7 267 aa19.56■□□□□ 0.72
CCDC88B-206ENST00000473405 WSB2Q9NYS7 404 aaPredicted RBP19.56■□□□□ 0.72
CCDC88B-206ENST00000473405 KIAA1468Q9P260 1216 aa19.56■□□□□ 0.72
CCDC88B-206ENST00000473405 NBEAQ8NFP9 2946 aa19.56■□□□□ 0.72
CCDC88B-206ENST00000473405 GOLGA6L7A0A1B0GV03 622 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 NDUFS2O75306 463 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 IGLV3-19P01714 112 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 EPHX1P07099 455 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 KRT5P13647 590 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 HLA-EP13747 358 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 GFPT1Q06210 699 aaPredicted RBP19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 E2F5Q15329 346 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 MEA1Q16626 185 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 PTPRNQ16849 979 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 PIK3R6Q5UE93 754 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 TRIM65Q6PJ69 517 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 CACUL1Q86Y37 369 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 UNC45BQ8IWX7 931 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 DEFB124Q8NES8 71 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 DQX1Q8TE96 717 aaKnown RBP19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 WFIKKN2Q8TEU8 576 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 CYB5D2Q8WUJ1 264 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 GOLGA1Q92805 767 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 MYEOVQ96EZ4 313 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 SIPA1Q96FS4 1042 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 FCRL2Q96LA5 508 aaPredicted RBP19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 ACP6Q9NPH0 428 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 CYTH4Q9UIA0 394 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 RWDD2AQ9UIY3 292 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 GGA2Q9UJY4 613 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 WASF3Q9UPY6 502 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 LAMA5O15230 3695 aa19.55■□□□□ 0.72
CCDC88B-206ENST00000473405 ACSL4O60488 711 aa19.54■□□□□ 0.72
CCDC88B-206ENST00000473405 C7P10643 843 aa19.54■□□□□ 0.72
CCDC88B-206ENST00000473405 PABPC1P11940 636 aaKnown RBP19.54■□□□□ 0.72
CCDC88B-206ENST00000473405 SLC11A2P49281 568 aa19.54■□□□□ 0.72
CCDC88B-206ENST00000473405 TBX4P57082 545 aa19.54■□□□□ 0.72
CCDC88B-206ENST00000473405 SEMA3BQ13214 749 aa19.54■□□□□ 0.72
CCDC88B-206ENST00000473405 CAMK2GQ13555 558 aaPredicted RBP19.54■□□□□ 0.72
CCDC88B-206ENST00000473405 CAMK4Q16566 473 aa19.54■□□□□ 0.72
CCDC88B-206ENST00000473405 MPP7Q5T2T1 576 aa19.54■□□□□ 0.72
CCDC88B-206ENST00000473405 CHST9Q7L1S5 443 aa19.54■□□□□ 0.72
CCDC88B-206ENST00000473405 PIP4P1Q86T03 277 aa19.54■□□□□ 0.72
CCDC88B-206ENST00000473405 AHI1Q8N157 1196 aa19.54■□□□□ 0.72
CCDC88B-206ENST00000473405 OR2I1PQ8NGU4 316 aa19.54■□□□□ 0.72
CCDC88B-206ENST00000473405 FOXJ1Q92949 421 aa19.54■□□□□ 0.72
CCDC88B-206ENST00000473405 AZIN2Q96A70 460 aa19.54■□□□□ 0.72
CCDC88B-206ENST00000473405 CRACR2AQ9BSW2 395 aa19.54■□□□□ 0.72
CCDC88B-206ENST00000473405 GTPBP2Q9BX10 602 aaKnown RBP19.54■□□□□ 0.72
CCDC88B-206ENST00000473405 IRX2Q9BZI1 471 aaPredicted RBP19.54■□□□□ 0.72
CCDC88B-206ENST00000473405 UBE2TQ9NPD8 197 aaPredicted RBP19.54■□□□□ 0.72
CCDC88B-206ENST00000473405 ST7Q9NRC1 585 aa19.54■□□□□ 0.72
CCDC88B-206ENST00000473405 NAALADL1Q9UQQ1 740 aa19.54■□□□□ 0.72
CCDC88B-206ENST00000473405 ANKRD11Q6UB99 2663 aaPredicted RBP19.54■□□□□ 0.72
CCDC88B-206ENST00000473405 UPK3BL1B0FP48 263 aa19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 UPK3BL2E5RIL1 263 aa19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 ARHGAP33O14559 1287 aa19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 IRAK2O43187 625 aa19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 TBL1XO60907 577 aa19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 MAOBP27338 520 aa19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 CD70P32970 193 aa19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 UBE2HP62256 183 aa19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 APBA1Q02410 837 aa19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 ARID5AQ03989 594 aa19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 NNTQ13423 1086 aa19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 FNDC3BQ53EP0 1204 aaKnown RBP19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 GJB7Q6PEY0 223 aa19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 IRF2BP1Q8IU81 584 aa19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 MINDY1Q8N5J2 469 aa19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 ZNF366Q8N895 744 aa19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 ADAM32Q8TC27 787 aa19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 PRCCQ92733 491 aaPredicted RBP19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 SLC39A13Q96H72 371 aa19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 LMLNQ96KR4 655 aa19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 SERPINB11Q96P15 392 aa19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 GPR174Q9BXC1 333 aa19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 SLC4A5Q9BY07 1137 aa19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 TLR6Q9Y2C9 796 aa19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 NFE2L3Q9Y4A8 694 aa19.53■□□□□ 0.72
CCDC88B-206ENST00000473405 BECN2A8MW95 431 aa19.52■□□□□ 0.72
CCDC88B-206ENST00000473405 E5RJQ4 531 aa19.52■□□□□ 0.72
CCDC88B-206ENST00000473405 PAPSS1O43252 624 aaPredicted RBP19.52■□□□□ 0.72
CCDC88B-206ENST00000473405 LETM1O95202 739 aaPredicted RBP19.52■□□□□ 0.72
CCDC88B-206ENST00000473405 FGFR1OPO95684 399 aaKnown RBP19.52■□□□□ 0.72
CCDC88B-206ENST00000473405 ST3GAL2Q16842 350 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms