RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 FGF10O15520 208 aaPredicted RBP13.26□□□□□ -0.29
VPS13D-205ENST00000473099 TGM5O43548 720 aa13.26□□□□□ -0.29
VPS13D-205ENST00000473099 CREB3O43889 395 aa13.26□□□□□ -0.29
VPS13D-205ENST00000473099 ZMYND10O75800 440 aa13.26□□□□□ -0.29
VPS13D-205ENST00000473099 GLUD1P00367 558 aa13.26□□□□□ -0.29
VPS13D-205ENST00000473099 IGLV3-27P01718 113 aa13.26□□□□□ -0.29
VPS13D-205ENST00000473099 PFKLP17858 780 aa13.26□□□□□ -0.29
VPS13D-205ENST00000473099 ITIH2P19823 946 aa13.26□□□□□ -0.29
VPS13D-205ENST00000473099 MRPS25P82663 173 aaKnown RBP13.26□□□□□ -0.29
VPS13D-205ENST00000473099 COG7P83436 770 aa13.26□□□□□ -0.29
VPS13D-205ENST00000473099 EFEMP1Q12805 493 aa13.26□□□□□ -0.29
VPS13D-205ENST00000473099 DPYSQ14117 519 aa13.26□□□□□ -0.29
VPS13D-205ENST00000473099 PAFAH1B3Q15102 231 aaKnown RBP13.26□□□□□ -0.29
VPS13D-205ENST00000473099 BEND6Q5SZJ8 279 aaPredicted RBP13.26□□□□□ -0.29
VPS13D-205ENST00000473099 HECTD3Q5T447 861 aa13.26□□□□□ -0.29
VPS13D-205ENST00000473099 NUGGCQ68CJ6 796 aa13.26□□□□□ -0.29
VPS13D-205ENST00000473099 C4orf22Q6V702 233 aa13.26□□□□□ -0.29
VPS13D-205ENST00000473099 CEP128Q6ZU80 1094 aa13.26□□□□□ -0.29
VPS13D-205ENST00000473099 DNAJB7Q7Z6W7 309 aaPredicted RBP13.26□□□□□ -0.29
VPS13D-205ENST00000473099 CDKL3Q8IVW4 592 aaPredicted RBP13.26□□□□□ -0.29
VPS13D-205ENST00000473099 UNC45BQ8IWX7 931 aa13.26□□□□□ -0.29
VPS13D-205ENST00000473099 AENQ8WTP8 325 aaKnown RBP13.26□□□□□ -0.29
VPS13D-205ENST00000473099 RSAD2Q8WXG1 361 aa13.26□□□□□ -0.29
VPS13D-205ENST00000473099 IFT81Q8WYA0 676 aa13.26□□□□□ -0.29
VPS13D-205ENST00000473099 CAVIN3Q969G5 261 aa13.26□□□□□ -0.29
VPS13D-205ENST00000473099 LRRC45Q96CN5 670 aa13.26□□□□□ -0.29
VPS13D-205ENST00000473099 SNF8Q96H20 258 aa13.26□□□□□ -0.29
VPS13D-205ENST00000473099 BTN2A3PQ96KV6 586 aa13.26□□□□□ -0.29
VPS13D-205ENST00000473099 BRD8Q9H0E9 1235 aa13.26□□□□□ -0.29
VPS13D-205ENST00000473099 CATSPERBQ9H7T0 1116 aa13.26□□□□□ -0.29
VPS13D-205ENST00000473099 MTRF1LQ9UGC7 380 aaKnown RBP13.26□□□□□ -0.29
VPS13D-205ENST00000473099 MIA3Q5JRA6 1907 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 NUP210Q8TEM1 1887 aaPredicted RBP13.25□□□□□ -0.29
VPS13D-205ENST00000473099 NYNRINQ9P2P1 1898 aaKnown RBP13.25□□□□□ -0.29
VPS13D-205ENST00000473099 BCLAF3A2AJT9 711 aaKnown RBP13.25□□□□□ -0.29
VPS13D-205ENST00000473099 ZNF840PA6NDX5 716 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 ZSCAN5CA6NGD5 496 aaPredicted RBP13.25□□□□□ -0.29
VPS13D-205ENST00000473099 H7C0C1 242 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 SGK1O00141 431 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 SMAPO00193 183 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 PPP1R12AO14974 1030 aaPredicted RBP13.25□□□□□ -0.29
VPS13D-205ENST00000473099 PAGE1O75459 146 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 FGF19O95750 216 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 KRT14P02533 472 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 PECAM1P16284 738 aaPredicted RBP13.25□□□□□ -0.29
VPS13D-205ENST00000473099 AMPD1P23109 780 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 HOXC13P31276 330 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 ACTN2P35609 894 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 ATP5OP48047 213 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 CARSP49589 748 aaKnown RBP13.25□□□□□ -0.29
VPS13D-205ENST00000473099 PGFP49763 221 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 ERVFC1P60507 584 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 ERVK-21P61565 698 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 RAB30Q15771 203 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 C9orf50Q5SZB4 431 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 PLPP4Q5VZY2 271 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 NCBP2-AS2Q69YL0 99 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 DARS2Q6PI48 645 aaKnown RBP13.25□□□□□ -0.29
VPS13D-205ENST00000473099 HDXQ7Z353 690 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 PCGF5Q86SE9 256 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 PYROXD2Q8N2H3 581 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 LZTR1Q8N653 840 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 KREMEN2Q8NCW0 462 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 PLD4Q96BZ4 506 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 TBC1D31Q96DN5 1066 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 FCRL2Q96LA5 508 aaPredicted RBP13.25□□□□□ -0.29
VPS13D-205ENST00000473099 C17orf80Q9BSJ5 609 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 FOXP3Q9BZS1 431 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 NACA2Q9H009 215 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 LMAN2LQ9H0V9 348 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 DPH5Q9H2P9 285 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 PRO3102Q9H379 93 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 PLEKHA4Q9H4M7 779 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 RETREG1Q9H6L5 497 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 ALG13Q9NP73 1137 aaKnown RBP13.25□□□□□ -0.29
VPS13D-205ENST00000473099 NFU1Q9UMS0 254 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 NEU2Q9Y3R4 380 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 HEY1Q9Y5J3 304 aa13.25□□□□□ -0.29
VPS13D-205ENST00000473099 NOTCH4Q99466 2003 aa13.24□□□□□ -0.29
VPS13D-205ENST00000473099 SLC12A8A0AV02 714 aa13.24□□□□□ -0.29
VPS13D-205ENST00000473099 ESYT3A0FGR9 886 aa13.24□□□□□ -0.29
VPS13D-205ENST00000473099 DCLK1O15075 740 aa13.24□□□□□ -0.29
VPS13D-205ENST00000473099 MSI1O43347 362 aaKnown RBP13.24□□□□□ -0.29
VPS13D-205ENST00000473099 C8AP07357 584 aa13.24□□□□□ -0.29
VPS13D-205ENST00000473099 ERCC2P18074 760 aa13.24□□□□□ -0.29
VPS13D-205ENST00000473099 MX2P20592 715 aa13.24□□□□□ -0.29
VPS13D-205ENST00000473099 HOXA9P31269 272 aa13.24□□□□□ -0.29
VPS13D-205ENST00000473099 ADCY8P40145 1251 aa13.24□□□□□ -0.29
VPS13D-205ENST00000473099 RPL21P46778 160 aaKnown RBP13.24□□□□□ -0.29
VPS13D-205ENST00000473099 PDK1Q15118 436 aa13.24□□□□□ -0.29
VPS13D-205ENST00000473099 SHHQ15465 462 aa13.24□□□□□ -0.29
VPS13D-205ENST00000473099 SLC45A4Q5BKX6 768 aa13.24□□□□□ -0.29
VPS13D-205ENST00000473099 MANEALQ5VSG8 457 aa13.24□□□□□ -0.29
VPS13D-205ENST00000473099 C1orf228Q6PIY5 440 aa13.24□□□□□ -0.29
VPS13D-205ENST00000473099 LRRC31Q6UY01 552 aa13.24□□□□□ -0.29
VPS13D-205ENST00000473099 AZIN2Q96A70 460 aa13.24□□□□□ -0.29
VPS13D-205ENST00000473099 RTP4Q96DX8 246 aa13.24□□□□□ -0.29
VPS13D-205ENST00000473099 GCNAQ96QF7 691 aa13.24□□□□□ -0.29
VPS13D-205ENST00000473099 FMO2Q99518 471 aa13.24□□□□□ -0.29
VPS13D-205ENST00000473099 TRIM31Q9BZY9 425 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms