RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 MAPK8P45983 427 aa15.91■□□□□ 0.14
VTI1A-203ENST00000472892 SLC11A2P49281 568 aa15.91■□□□□ 0.14
VTI1A-203ENST00000472892 TPMTP51580 245 aa15.91■□□□□ 0.14
VTI1A-203ENST00000472892 SGSHP51688 502 aa15.91■□□□□ 0.14
VTI1A-203ENST00000472892 TBX4P57082 545 aa15.91■□□□□ 0.14
VTI1A-203ENST00000472892 UBE2HP62256 183 aa15.91■□□□□ 0.14
VTI1A-203ENST00000472892 ARID5AQ03989 594 aa15.91■□□□□ 0.14
VTI1A-203ENST00000472892 FAM133BQ5BKY9 247 aaKnown RBP15.91■□□□□ 0.14
VTI1A-203ENST00000472892 DENND1BQ6P3S1 775 aa15.91■□□□□ 0.14
VTI1A-203ENST00000472892 SERPINA13PQ6UXR4 307 aa15.91■□□□□ 0.14
VTI1A-203ENST00000472892 BEND5Q7L4P6 421 aa15.91■□□□□ 0.14
VTI1A-203ENST00000472892 ENOSF1Q7L5Y1 443 aa15.91■□□□□ 0.14
VTI1A-203ENST00000472892 ADIPOR2Q86V24 386 aa15.91■□□□□ 0.14
VTI1A-203ENST00000472892 ZNF606Q8WXB4 792 aa15.91■□□□□ 0.14
VTI1A-203ENST00000472892 PRCCQ92733 491 aaPredicted RBP15.91■□□□□ 0.14
VTI1A-203ENST00000472892 FOXJ1Q92949 421 aa15.91■□□□□ 0.14
VTI1A-203ENST00000472892 SIPA1Q96FS4 1042 aa15.91■□□□□ 0.14
VTI1A-203ENST00000472892 TOE1Q96GM8 510 aaKnown RBP15.91■□□□□ 0.14
VTI1A-203ENST00000472892 MED15Q96RN5 788 aa15.91■□□□□ 0.14
VTI1A-203ENST00000472892 SLC4A5Q9BY07 1137 aa15.91■□□□□ 0.14
VTI1A-203ENST00000472892 TMEM245Q9H330 911 aa15.91■□□□□ 0.14
VTI1A-203ENST00000472892 PLA2G4CQ9UP65 541 aa15.91■□□□□ 0.14
VTI1A-203ENST00000472892 UPK3BL1B0FP48 263 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 UPK3BL2E5RIL1 263 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 SART1O43290 800 aaKnown RBP15.9■□□□□ 0.14
VTI1A-203ENST00000472892 MED7O43513 233 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 EPHX1P07099 455 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 KRT5P13647 590 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 OXTRP30559 389 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 SLC6A4P31645 630 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 ACADSBP45954 432 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 SEMA3BQ13214 749 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 NNTQ13423 1086 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 CAMK2GQ13555 558 aaPredicted RBP15.9■□□□□ 0.14
VTI1A-203ENST00000472892 CAMK4Q16566 473 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 PTPRNQ16849 979 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 WDR45BQ5MNZ6 344 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 SYCP2LQ5T4T6 812 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 RFWD3Q6PCD5 774 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 CHST9Q7L1S5 443 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 TMEM110Q86TL2 294 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 AHI1Q8N157 1196 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 CADM4Q8NFZ8 388 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 DQX1Q8TE96 717 aaKnown RBP15.9■□□□□ 0.14
VTI1A-203ENST00000472892 DNASE2BQ8WZ79 361 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 SLC39A13Q96H72 371 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 FCRL2Q96LA5 508 aaPredicted RBP15.9■□□□□ 0.14
VTI1A-203ENST00000472892 FAM81BQ96LP2 452 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 FSCN3Q9NQT6 498 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 ST7Q9NRC1 585 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 ABCB8Q9NUT2 735 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 GGA2Q9UJY4 613 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 NAALADL1Q9UQQ1 740 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 TLR6Q9Y2C9 796 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 NFE2L3Q9Y4A8 694 aa15.9■□□□□ 0.14
VTI1A-203ENST00000472892 ARHGAP33O14559 1287 aa15.89■□□□□ 0.13
VTI1A-203ENST00000472892 TBL1XO60907 577 aa15.89■□□□□ 0.13
VTI1A-203ENST00000472892 PABPC1P11940 636 aaKnown RBP15.89■□□□□ 0.13
VTI1A-203ENST00000472892 HLA-EP13747 358 aa15.89■□□□□ 0.13
VTI1A-203ENST00000472892 ATXN3P54252 364 aaPredicted RBP15.89■□□□□ 0.13
VTI1A-203ENST00000472892 MBLAC2Q68D91 279 aa15.89■□□□□ 0.13
VTI1A-203ENST00000472892 NADSYN1Q6IA69 706 aa15.89■□□□□ 0.13
VTI1A-203ENST00000472892 TRIM65Q6PJ69 517 aa15.89■□□□□ 0.13
VTI1A-203ENST00000472892 PIP4P1Q86T03 277 aa15.89■□□□□ 0.13
VTI1A-203ENST00000472892 IRF2BP1Q8IU81 584 aa15.89■□□□□ 0.13
VTI1A-203ENST00000472892 RGL4Q8IZJ4 473 aa15.89■□□□□ 0.13
VTI1A-203ENST00000472892 DEFB124Q8NES8 71 aa15.89■□□□□ 0.13
VTI1A-203ENST00000472892 OR2T3Q8NH03 318 aa15.89■□□□□ 0.13
VTI1A-203ENST00000472892 CYB5D2Q8WUJ1 264 aa15.89■□□□□ 0.13
VTI1A-203ENST00000472892 LMLNQ96KR4 655 aa15.89■□□□□ 0.13
VTI1A-203ENST00000472892 SERPINB11Q96P15 392 aa15.89■□□□□ 0.13
VTI1A-203ENST00000472892 DDX50Q9BQ39 737 aaKnown RBP15.89■□□□□ 0.13
VTI1A-203ENST00000472892 CRACR2AQ9BSW2 395 aa15.89■□□□□ 0.13
VTI1A-203ENST00000472892 NUP58Q9BVL2 599 aa15.89■□□□□ 0.13
VTI1A-203ENST00000472892 GPR174Q9BXC1 333 aa15.89■□□□□ 0.13
VTI1A-203ENST00000472892 SUSD2Q9UGT4 822 aa15.89■□□□□ 0.13
VTI1A-203ENST00000472892 CYTH4Q9UIA0 394 aa15.89■□□□□ 0.13
VTI1A-203ENST00000472892 CEP192Q8TEP8 1941 aa15.89■□□□□ 0.13
VTI1A-203ENST00000472892 EPG5Q9HCE0 2579 aa15.88■□□□□ 0.13
VTI1A-203ENST00000472892 PI4KAP42356 2102 aa15.88■□□□□ 0.13
VTI1A-203ENST00000472892 METTL12A8MUP2 240 aa15.88■□□□□ 0.13
VTI1A-203ENST00000472892 PAPSS1O43252 624 aaPredicted RBP15.88■□□□□ 0.13
VTI1A-203ENST00000472892 LETM1O95202 739 aaPredicted RBP15.88■□□□□ 0.13
VTI1A-203ENST00000472892 ATP5BP06576 529 aaKnown RBP15.88■□□□□ 0.13
VTI1A-203ENST00000472892 SYPP08247 313 aa15.88■□□□□ 0.13
VTI1A-203ENST00000472892 DLDP09622 509 aaKnown RBP15.88■□□□□ 0.13
VTI1A-203ENST00000472892 ACADMP11310 421 aa15.88■□□□□ 0.13
VTI1A-203ENST00000472892 GNSP15586 552 aa15.88■□□□□ 0.13
VTI1A-203ENST00000472892 SLC9A1P19634 815 aa15.88■□□□□ 0.13
VTI1A-203ENST00000472892 MAOBP27338 520 aa15.88■□□□□ 0.13
VTI1A-203ENST00000472892 CD70P32970 193 aa15.88■□□□□ 0.13
VTI1A-203ENST00000472892 ZNF252P-AS1Q0IIN9 211 aa15.88■□□□□ 0.13
VTI1A-203ENST00000472892 FNDC3BQ53EP0 1204 aaKnown RBP15.88■□□□□ 0.13
VTI1A-203ENST00000472892 SYPL2Q5VXT5 272 aa15.88■□□□□ 0.13
VTI1A-203ENST00000472892 SMYD5Q6GMV2 418 aa15.88■□□□□ 0.13
VTI1A-203ENST00000472892 GJB7Q6PEY0 223 aa15.88■□□□□ 0.13
VTI1A-203ENST00000472892 ZNF557Q8N988 423 aaPredicted RBP15.88■□□□□ 0.13
VTI1A-203ENST00000472892 MLKLQ8NB16 471 aa15.88■□□□□ 0.13
VTI1A-203ENST00000472892 FIBINQ8TAL6 211 aa15.88■□□□□ 0.13
VTI1A-203ENST00000472892 WFDC5Q8TCV5 224 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms