RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 EPHX1P07099 455 aa20.18■□□□□ 0.82
COMMD1-208ENST00000472729 PNMA6AP0CW24 399 aaPredicted RBP20.18■□□□□ 0.82
COMMD1-208ENST00000472729 ACADMP11310 421 aa20.18■□□□□ 0.82
COMMD1-208ENST00000472729 CYP11B1P15538 503 aa20.18■□□□□ 0.82
COMMD1-208ENST00000472729 POLR2EP19388 210 aaKnown RBP20.18■□□□□ 0.82
COMMD1-208ENST00000472729 CLCN1P35523 988 aa20.18■□□□□ 0.82
COMMD1-208ENST00000472729 DPP6P42658 865 aa20.18■□□□□ 0.82
COMMD1-208ENST00000472729 RPL6Q02878 288 aaKnown RBP20.18■□□□□ 0.82
COMMD1-208ENST00000472729 MTA1Q13330 715 aa20.18■□□□□ 0.82
COMMD1-208ENST00000472729 CDH18Q13634 790 aa20.18■□□□□ 0.82
COMMD1-208ENST00000472729 KRT31Q15323 416 aa20.18■□□□□ 0.82
COMMD1-208ENST00000472729 FNDC3BQ53EP0 1204 aaKnown RBP20.18■□□□□ 0.82
COMMD1-208ENST00000472729 ZC3H12AQ5D1E8 599 aaKnown RBP20.18■□□□□ 0.82
COMMD1-208ENST00000472729 PIK3R6Q5UE93 754 aa20.18■□□□□ 0.82
COMMD1-208ENST00000472729 IL31Q6EBC2 164 aa20.18■□□□□ 0.82
COMMD1-208ENST00000472729 CHST9Q7L1S5 443 aa20.18■□□□□ 0.82
COMMD1-208ENST00000472729 BTN2A3PQ96KV6 586 aa20.18■□□□□ 0.82
COMMD1-208ENST00000472729 FCRL2Q96LA5 508 aaPredicted RBP20.18■□□□□ 0.82
COMMD1-208ENST00000472729 SPAG5Q96R06 1193 aa20.18■□□□□ 0.82
COMMD1-208ENST00000472729 RTKNQ9BST9 563 aa20.18■□□□□ 0.82
COMMD1-208ENST00000472729 ASNSD1Q9NWL6 643 aa20.18■□□□□ 0.82
COMMD1-208ENST00000472729 DDIT4Q9NX09 232 aa20.18■□□□□ 0.82
COMMD1-208ENST00000472729 COX16Q9P0S2 106 aa20.18■□□□□ 0.82
COMMD1-208ENST00000472729 THAP10Q9P2Z0 257 aaPredicted RBP20.18■□□□□ 0.82
COMMD1-208ENST00000472729 GGA2Q9UJY4 613 aa20.18■□□□□ 0.82
COMMD1-208ENST00000472729 MYO16Q9Y6X6 1858 aa20.18■□□□□ 0.82
COMMD1-208ENST00000472729 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.17■□□□□ 0.82
COMMD1-208ENST00000472729 WASH3PC4AMC7 463 aa20.17■□□□□ 0.82
COMMD1-208ENST00000472729 KHNYNO15037 678 aaKnown RBP20.17■□□□□ 0.82
COMMD1-208ENST00000472729 GRAP2O75791 330 aa20.17■□□□□ 0.82
COMMD1-208ENST00000472729 MOCS3O95396 460 aa20.17■□□□□ 0.82
COMMD1-208ENST00000472729 PABPC1P11940 636 aaKnown RBP20.17■□□□□ 0.82
COMMD1-208ENST00000472729 CCR1P32246 355 aa20.17■□□□□ 0.82
COMMD1-208ENST00000472729 ST8SIA6P61647 398 aa20.17■□□□□ 0.82
COMMD1-208ENST00000472729 KCNMA1Q12791 1236 aa20.17■□□□□ 0.82
COMMD1-208ENST00000472729 ZNF234Q14588 700 aa20.17■□□□□ 0.82
COMMD1-208ENST00000472729 SF3A2Q15428 464 aaKnown RBP20.17■□□□□ 0.82
COMMD1-208ENST00000472729 SPDYCQ5MJ68 293 aa20.17■□□□□ 0.82
COMMD1-208ENST00000472729 CDKAL1Q5VV42 579 aa20.17■□□□□ 0.82
COMMD1-208ENST00000472729 TAF3Q5VWG9 929 aa20.17■□□□□ 0.82
COMMD1-208ENST00000472729 KIAA1211LQ6NV74 962 aa20.17■□□□□ 0.82
COMMD1-208ENST00000472729 SND1Q7KZF4 910 aaKnown RBP eCLIP20.17■□□□□ 0.82
COMMD1-208ENST00000472729 CHSY1Q86X52 802 aa20.17■□□□□ 0.82
COMMD1-208ENST00000472729 TMEFF1Q8IYR6 380 aa20.17■□□□□ 0.82
COMMD1-208ENST00000472729 DEFB106AQ8N104 65 aa20.17■□□□□ 0.82
COMMD1-208ENST00000472729 CARNMT1Q8N4J0 409 aa20.17■□□□□ 0.82
COMMD1-208ENST00000472729 WDTC1Q8N5D0 677 aa20.17■□□□□ 0.82
COMMD1-208ENST00000472729 PIGKQ92643 395 aa20.17■□□□□ 0.82
COMMD1-208ENST00000472729 PLCB1Q9NQ66 1216 aa20.17■□□□□ 0.82
COMMD1-208ENST00000472729 FAM207AQ9NSI2 230 aaPredicted RBP20.17■□□□□ 0.82
COMMD1-208ENST00000472729 DLL3Q9NYJ7 618 aa20.17■□□□□ 0.82
COMMD1-208ENST00000472729 AJAP1Q9UKB5 411 aaPredicted RBP20.17■□□□□ 0.82
COMMD1-208ENST00000472729 HCN2Q9UL51 889 aa20.17■□□□□ 0.82
COMMD1-208ENST00000472729 CLEC4EQ9ULY5 219 aa20.17■□□□□ 0.82
COMMD1-208ENST00000472729 CFAP54Q96N23 3096 aa20.17■□□□□ 0.82
COMMD1-208ENST00000472729 BCLAF3A2AJT9 711 aaKnown RBP20.16■□□□□ 0.82
COMMD1-208ENST00000472729 F5H5T6 163 aa20.16■□□□□ 0.82
COMMD1-208ENST00000472729 H0Y626 953 aa20.16■□□□□ 0.82
COMMD1-208ENST00000472729 CHRM1P11229 460 aaPredicted RBP20.16■□□□□ 0.82
COMMD1-208ENST00000472729 NDUFV2P19404 249 aa20.16■□□□□ 0.82
COMMD1-208ENST00000472729 BCKDHBP21953 392 aa20.16■□□□□ 0.82
COMMD1-208ENST00000472729 HLA-FP30511 346 aa20.16■□□□□ 0.82
COMMD1-208ENST00000472729 RNASE9P60153 205 aaKnown RBP20.16■□□□□ 0.82
COMMD1-208ENST00000472729 SLC6A3Q01959 620 aa20.16■□□□□ 0.82
COMMD1-208ENST00000472729 NME3Q13232 169 aa20.16■□□□□ 0.82
COMMD1-208ENST00000472729 SYCP1Q15431 976 aa20.16■□□□□ 0.82
COMMD1-208ENST00000472729 TAF5Q15542 800 aa20.16■□□□□ 0.82
COMMD1-208ENST00000472729 MAP7D1Q3KQU3 841 aa20.16■□□□□ 0.82
COMMD1-208ENST00000472729 LYSMD4Q5XG99 296 aa20.16■□□□□ 0.82
COMMD1-208ENST00000472729 FAM183BPQ6ZVS7 135 aa20.16■□□□□ 0.82
COMMD1-208ENST00000472729 ARMCX6Q7L4S7 300 aa20.16■□□□□ 0.82
COMMD1-208ENST00000472729 ERICH1Q86X53 443 aa20.16■□□□□ 0.82
COMMD1-208ENST00000472729 SORCS1Q8WY21 1168 aa20.16■□□□□ 0.82
COMMD1-208ENST00000472729 PRCCQ92733 491 aaPredicted RBP20.16■□□□□ 0.82
COMMD1-208ENST00000472729 PRDM16Q9HAZ2 1276 aa20.16■□□□□ 0.82
COMMD1-208ENST00000472729 STAP1Q9ULZ2 295 aa20.16■□□□□ 0.82
COMMD1-208ENST00000472729 CYP8B1Q9UNU6 501 aa20.16■□□□□ 0.82
COMMD1-208ENST00000472729 DAAM1Q9Y4D1 1078 aa20.16■□□□□ 0.82
COMMD1-208ENST00000472729 FANCMQ8IYD8 2048 aa20.15■□□□□ 0.82
COMMD1-208ENST00000472729 F8VZ95 297 aa20.15■□□□□ 0.82
COMMD1-208ENST00000472729 LSM8O95777 96 aaKnown RBP20.15■□□□□ 0.82
COMMD1-208ENST00000472729 SLC6A4P31645 630 aa20.15■□□□□ 0.82
COMMD1-208ENST00000472729 IL12RB1P42701 662 aa20.15■□□□□ 0.82
COMMD1-208ENST00000472729 POLR2FP61218 127 aaKnown RBP20.15■□□□□ 0.82
COMMD1-208ENST00000472729 UBXN1Q04323 297 aa20.15■□□□□ 0.82
COMMD1-208ENST00000472729 FAM133BQ5BKY9 247 aaKnown RBP20.15■□□□□ 0.82
COMMD1-208ENST00000472729 MS4A13Q5J8X5 152 aa20.15■□□□□ 0.82
COMMD1-208ENST00000472729 RABGAP1LQ5R372 815 aa20.15■□□□□ 0.82
COMMD1-208ENST00000472729 LGI2Q8N0V4 545 aa20.15■□□□□ 0.82
COMMD1-208ENST00000472729 NEK11Q8NG66 645 aa20.15■□□□□ 0.82
COMMD1-208ENST00000472729 DDX1Q92499 740 aaKnown RBP20.15■□□□□ 0.82
COMMD1-208ENST00000472729 C18orf8Q96DM3 657 aa20.15■□□□□ 0.82
COMMD1-208ENST00000472729 SIPA1Q96FS4 1042 aa20.15■□□□□ 0.82
COMMD1-208ENST00000472729 P2RY11Q96G91 374 aa20.15■□□□□ 0.82
COMMD1-208ENST00000472729 SLC39A13Q96H72 371 aa20.15■□□□□ 0.82
COMMD1-208ENST00000472729 MRGPRX1Q96LB2 322 aa20.15■□□□□ 0.82
COMMD1-208ENST00000472729 TMEM51Q9NW97 253 aa20.15■□□□□ 0.82
COMMD1-208ENST00000472729 RRN3Q9NYV6 651 aa20.15■□□□□ 0.82
COMMD1-208ENST00000472729 PAXBP1Q9Y5B6 917 aa20.15■□□□□ 0.82
COMMD1-208ENST00000472729 KCNU1A8MYU2 1149 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms