RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 KLF16Q9BXK1 252 aaPredicted RBP6.15□□□□□ -1.42
SIK3-208ENST00000472648 PABPC3Q9H361 631 aaKnown RBP6.15□□□□□ -1.42
SIK3-208ENST00000472648 KDM4CQ9H3R0 1056 aa6.15□□□□□ -1.42
SIK3-208ENST00000472648 AGO2Q9UKV8 859 aaKnown RBP6.15□□□□□ -1.42
SIK3-208ENST00000472648 ITGA11Q9UKX5 1188 aa6.15□□□□□ -1.42
SIK3-208ENST00000472648 TPX2Q9ULW0 747 aaKnown RBP6.15□□□□□ -1.42
SIK3-208ENST00000472648 PLA2G4CQ9UP65 541 aa6.15□□□□□ -1.42
SIK3-208ENST00000472648 SHANK1Q9Y566 2161 aa6.15□□□□□ -1.43
SIK3-208ENST00000472648 ATP8B3O60423 1300 aa6.15□□□□□ -1.43
SIK3-208ENST00000472648 PCNX1Q96RV3 2341 aa6.15□□□□□ -1.43
SIK3-208ENST00000472648 CSMD2Q7Z408 3487 aa6.15□□□□□ -1.43
SIK3-208ENST00000472648 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.14□□□□□ -1.43
SIK3-208ENST00000472648 A0A1W2PP55 124 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 MTSS1O43312 755 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 GREM1O60565 184 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 RNASEH1O60930 286 aaKnown RBP6.14□□□□□ -1.43
SIK3-208ENST00000472648 VPS4BO75351 444 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 TCEA3O75764 348 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 RNASEH2AO75792 299 aaKnown RBP6.14□□□□□ -1.43
SIK3-208ENST00000472648 PENKP01210 267 aaPredicted RBP6.14□□□□□ -1.43
SIK3-208ENST00000472648 C7P10643 843 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 COL8A1P27658 744 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 CHKAP35790 457 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 ATP5C1P36542 298 aaKnown RBP6.14□□□□□ -1.43
SIK3-208ENST00000472648 IRX6P78412 446 aaPredicted RBP6.14□□□□□ -1.43
SIK3-208ENST00000472648 RBP5P82980 135 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 POU5F1Q01860 360 aaKnown RBP6.14□□□□□ -1.43
SIK3-208ENST00000472648 OVGP1Q12889 678 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 ZNF177Q13360 481 aaPredicted RBP6.14□□□□□ -1.43
SIK3-208ENST00000472648 TOB2Q14106 344 aaPredicted RBP6.14□□□□□ -1.43
SIK3-208ENST00000472648 KCNJ12Q14500 433 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 NAA30Q147X3 362 aaPredicted RBP6.14□□□□□ -1.43
SIK3-208ENST00000472648 FYB2Q5VWT5 728 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 SLFN12LQ6IEE8 588 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 SLC39A4Q6P5W5 647 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 DPH6Q7L8W6 267 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 PRPF39Q86UA1 669 aaKnown RBP6.14□□□□□ -1.43
SIK3-208ENST00000472648 IQCHQ86VS3 1027 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 C1orf127Q8N9H9 656 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 TPCN2Q8NHX9 752 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 SCAMP5Q8TAC9 235 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 C9orf43Q8TAL5 461 aaPredicted RBP6.14□□□□□ -1.43
SIK3-208ENST00000472648 CYB5D2Q8WUJ1 264 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 KBTBD7Q8WVZ9 684 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 HTR3CQ8WXA8 447 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 PIWIL1Q96J94 861 aaKnown RBP6.14□□□□□ -1.43
SIK3-208ENST00000472648 DUSP23Q9BVJ7 150 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 SLC2A11Q9BYW1 496 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 RAB34Q9BZG1 259 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 ZNF518BQ9C0D4 1074 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 TMEM245Q9H330 911 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 SNX25Q9H3E2 840 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 SYNDIG1Q9H7V2 258 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 PRSS16Q9NQE7 514 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 ZNF71Q9NQZ8 489 aaPredicted RBP6.14□□□□□ -1.43
SIK3-208ENST00000472648 TLR8Q9NR97 1041 aaKnown RBP6.14□□□□□ -1.43
SIK3-208ENST00000472648 CUEDC1Q9NWM3 386 aaPredicted RBP6.14□□□□□ -1.43
SIK3-208ENST00000472648 UCKL1Q9NWZ5 548 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 NLGN3Q9NZ94 848 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 DKK3Q9UBP4 350 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 SERGEFQ9UGK8 458 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 ACSL6Q9UKU0 697 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 FZD4Q9ULV1 537 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 VPS4AQ9UN37 437 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 ZNF510Q9Y2H8 683 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 PCDHB11Q9Y5F2 797 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 PCDHGA7Q9Y5G6 932 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 AKAP9Q99996 3911 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 CHD5Q8TDI0 1954 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 UBE4BO95155 1302 aa6.14□□□□□ -1.43
SIK3-208ENST00000472648 CPED1A4D0V7 1026 aa6.13□□□□□ -1.43
SIK3-208ENST00000472648 NEMP2A6NFY4 417 aa6.13□□□□□ -1.43
SIK3-208ENST00000472648 CLDN5O00501 218 aa6.13□□□□□ -1.43
SIK3-208ENST00000472648 PLD2O14939 933 aa6.13□□□□□ -1.43
SIK3-208ENST00000472648 DDAH2O95865 285 aa6.13□□□□□ -1.43
SIK3-208ENST00000472648 KRT7P08729 469 aa6.13□□□□□ -1.43
SIK3-208ENST00000472648 ZDHHC11BP0C7U3 371 aa6.13□□□□□ -1.43
SIK3-208ENST00000472648 WARSP23381 471 aaKnown RBP6.13□□□□□ -1.43
SIK3-208ENST00000472648 ABCD1P33897 745 aa6.13□□□□□ -1.43
SIK3-208ENST00000472648 UQCRFS1P47985 274 aa6.13□□□□□ -1.43
SIK3-208ENST00000472648 FXR2P51116 673 aaKnown RBP eCLIP6.13□□□□□ -1.43
SIK3-208ENST00000472648 SLC5A3P53794 718 aa6.13□□□□□ -1.43
SIK3-208ENST00000472648 ADPRHP54922 357 aa6.13□□□□□ -1.43
SIK3-208ENST00000472648 EIF3IQ13347 325 aaKnown RBP6.13□□□□□ -1.43
SIK3-208ENST00000472648 ORC2Q13416 577 aaPredicted RBP6.13□□□□□ -1.43
SIK3-208ENST00000472648 TRIM29Q14134 588 aa6.13□□□□□ -1.43
SIK3-208ENST00000472648 SPIDRQ14159 915 aa6.13□□□□□ -1.43
SIK3-208ENST00000472648 STAT4Q14765 748 aa6.13□□□□□ -1.43
SIK3-208ENST00000472648 ZRSR1Q15695 479 aaKnown RBP6.13□□□□□ -1.43
SIK3-208ENST00000472648 CDKN3Q16667 212 aa6.13□□□□□ -1.43
SIK3-208ENST00000472648 KRT79Q5XKE5 535 aa6.13□□□□□ -1.43
SIK3-208ENST00000472648 TMEM215Q68D42 235 aa6.13□□□□□ -1.43
SIK3-208ENST00000472648 CRTC1Q6UUV9 634 aa6.13□□□□□ -1.43
SIK3-208ENST00000472648 Q6ZNB5 142 aa6.13□□□□□ -1.43
SIK3-208ENST00000472648 SND1Q7KZF4 910 aaKnown RBP eCLIP6.13□□□□□ -1.43
SIK3-208ENST00000472648 EFL1Q7Z2Z2 1120 aaKnown RBP6.13□□□□□ -1.43
SIK3-208ENST00000472648 DSG4Q86SJ6 1040 aa6.13□□□□□ -1.43
SIK3-208ENST00000472648 HEATR4Q86WZ0 1026 aa6.13□□□□□ -1.43
SIK3-208ENST00000472648 DIS3L2Q8IYB7 885 aaKnown RBP6.13□□□□□ -1.43
SIK3-208ENST00000472648 FBXO39Q8N4B4 442 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms