RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 A0A1W2PPC1 479 aa5.39□□□□□ -1.55
CD46-213ENST00000471987 OR2W5A6NFC9 320 aa5.39□□□□□ -1.55
CD46-213ENST00000471987 ATG13O75143 517 aa5.39□□□□□ -1.55
CD46-213ENST00000471987 STAT6P42226 847 aa5.39□□□□□ -1.55
CD46-213ENST00000471987 PIK3CBP42338 1070 aa5.39□□□□□ -1.55
CD46-213ENST00000471987 SMTNL2Q2TAL5 461 aa5.39□□□□□ -1.55
CD46-213ENST00000471987 ANXA2RQ3ZCQ2 193 aa5.39□□□□□ -1.55
CD46-213ENST00000471987 RHPN2Q8IUC4 686 aa5.39□□□□□ -1.55
CD46-213ENST00000471987 LAS2Q8IYD9 372 aa5.39□□□□□ -1.55
CD46-213ENST00000471987 CCDC33Q8N5R6 958 aa5.39□□□□□ -1.55
CD46-213ENST00000471987 ARL14EPQ8N8R7 260 aaPredicted RBP5.39□□□□□ -1.55
CD46-213ENST00000471987 ZFPM2Q8WW38 1151 aa5.39□□□□□ -1.55
CD46-213ENST00000471987 SNX27Q96L92 541 aa5.39□□□□□ -1.55
CD46-213ENST00000471987 PCDHAC1Q9H158 963 aa5.39□□□□□ -1.55
CD46-213ENST00000471987 DDX21Q9NR30 783 aaKnown RBP eCLIP5.39□□□□□ -1.55
CD46-213ENST00000471987 MYO1AQ9UBC5 1043 aa5.39□□□□□ -1.55
CD46-213ENST00000471987 ZMYND8Q9ULU4 1186 aaPredicted RBP5.39□□□□□ -1.55
CD46-213ENST00000471987 GTPBP1O00178 669 aaKnown RBP5.38□□□□□ -1.55
CD46-213ENST00000471987 SPTLC2O15270 562 aa5.38□□□□□ -1.55
CD46-213ENST00000471987 VIPP01282 170 aa5.38□□□□□ -1.55
CD46-213ENST00000471987 ALADP13716 330 aa5.38□□□□□ -1.55
CD46-213ENST00000471987 P2RX3P56373 397 aa5.38□□□□□ -1.55
CD46-213ENST00000471987 CBFBQ13951 182 aa5.38□□□□□ -1.55
CD46-213ENST00000471987 SLC5A9Q2M3M2 681 aa5.38□□□□□ -1.55
CD46-213ENST00000471987 ISM2Q6H9L7 571 aa5.38□□□□□ -1.55
CD46-213ENST00000471987 ZNF474Q6S9Z5 364 aaPredicted RBP5.38□□□□□ -1.55
CD46-213ENST00000471987 RNF152Q8N8N0 203 aa5.38□□□□□ -1.55
CD46-213ENST00000471987 FAM47BQ8NA70 645 aa5.38□□□□□ -1.55
CD46-213ENST00000471987 ASB5Q8WWX0 329 aa5.38□□□□□ -1.55
CD46-213ENST00000471987 TIFAQ96CG3 184 aa5.38□□□□□ -1.55
CD46-213ENST00000471987 COLEC11Q9BWP8 271 aa5.38□□□□□ -1.55
CD46-213ENST00000471987 A0A1W2PPC4 97 aa5.37□□□□□ -1.55
CD46-213ENST00000471987 DPPA5A6NC42 116 aa5.37□□□□□ -1.55
CD46-213ENST00000471987 KPNA5O15131 536 aa5.37□□□□□ -1.55
CD46-213ENST00000471987 TGFB3P10600 412 aa5.37□□□□□ -1.55
CD46-213ENST00000471987 HOXB2P14652 356 aa5.37□□□□□ -1.55
CD46-213ENST00000471987 TSHRP16473 764 aa5.37□□□□□ -1.55
CD46-213ENST00000471987 PGM5Q15124 567 aa5.37□□□□□ -1.55
CD46-213ENST00000471987 P3H1Q32P28 736 aa5.37□□□□□ -1.55
CD46-213ENST00000471987 PIK3CD-AS1Q5SR53 167 aa5.37□□□□□ -1.55
CD46-213ENST00000471987 C6orf10Q5SRN2 563 aa5.37□□□□□ -1.55
CD46-213ENST00000471987 RAP1GAP2Q684P5 730 aa5.37□□□□□ -1.55
CD46-213ENST00000471987 PDXDC1Q6P996 788 aa5.37□□□□□ -1.55
CD46-213ENST00000471987 PIK3AP1Q6ZUJ8 805 aa5.37□□□□□ -1.55
CD46-213ENST00000471987 DGKHQ86XP1 1220 aa5.37□□□□□ -1.55
CD46-213ENST00000471987 CTAGE1Q96RT6 745 aa5.37□□□□□ -1.55
CD46-213ENST00000471987 WDR83Q9BRX9 315 aaKnown RBP5.37□□□□□ -1.55
CD46-213ENST00000471987 EIF2AQ9BY44 585 aaKnown RBP5.37□□□□□ -1.55
CD46-213ENST00000471987 RBM38Q9H0Z9 239 aaKnown RBP5.37□□□□□ -1.55
CD46-213ENST00000471987 EME2A4GXA9 379 aaPredicted RBP5.36□□□□□ -1.55
CD46-213ENST00000471987 NGFRP08138 427 aa5.36□□□□□ -1.55
CD46-213ENST00000471987 EGR1P18146 543 aa5.36□□□□□ -1.55
CD46-213ENST00000471987 KCNJ4P48050 445 aa5.36□□□□□ -1.55
CD46-213ENST00000471987 CASP5P51878 434 aa5.36□□□□□ -1.55
CD46-213ENST00000471987 ZXDBP98169 803 aa5.36□□□□□ -1.55
CD46-213ENST00000471987 ZNF585BQ52M93 769 aa5.36□□□□□ -1.55
CD46-213ENST00000471987 LRIG3Q6UXM1 1119 aa5.36□□□□□ -1.55
CD46-213ENST00000471987 KRT27Q7Z3Y8 459 aa5.36□□□□□ -1.55
CD46-213ENST00000471987 WDR75Q8IWA0 830 aaKnown RBP5.36□□□□□ -1.55
CD46-213ENST00000471987 LPAR1Q92633 364 aa5.36□□□□□ -1.55
CD46-213ENST00000471987 CENPIQ92674 756 aaPredicted RBP5.36□□□□□ -1.55
CD46-213ENST00000471987 ZNF479Q96JC4 524 aa5.36□□□□□ -1.55
CD46-213ENST00000471987 ELOVL1Q9BW60 279 aa5.36□□□□□ -1.55
CD46-213ENST00000471987 UTS2RQ9UKP6 389 aa5.36□□□□□ -1.55
CD46-213ENST00000471987 PROCRQ9UNN8 238 aa5.36□□□□□ -1.55
CD46-213ENST00000471987 C4orf47A7E2U8 309 aa5.35□□□□□ -1.55
CD46-213ENST00000471987 PRSS44E7EML9 344 aa5.35□□□□□ -1.55
CD46-213ENST00000471987 APOL1O14791 398 aa5.35□□□□□ -1.55
CD46-213ENST00000471987 SLC28A2O43868 658 aa5.35□□□□□ -1.55
CD46-213ENST00000471987 GABRB3P28472 473 aa5.35□□□□□ -1.55
CD46-213ENST00000471987 STT3AP46977 705 aa5.35□□□□□ -1.55
CD46-213ENST00000471987 ARHGAP15Q53QZ3 475 aa5.35□□□□□ -1.55
CD46-213ENST00000471987 NUGGCQ68CJ6 796 aa5.35□□□□□ -1.55
CD46-213ENST00000471987 TTLL5Q6EMB2 1281 aa5.35□□□□□ -1.55
CD46-213ENST00000471987 DDIASQ8IXT1 998 aa5.35□□□□□ -1.55
CD46-213ENST00000471987 EME1Q96AY2 570 aa5.35□□□□□ -1.55
CD46-213ENST00000471987 CLMNQ96JQ2 1002 aa5.35□□□□□ -1.55
CD46-213ENST00000471987 GPR78Q96P69 363 aa5.35□□□□□ -1.55
CD46-213ENST00000471987 TASP1Q9H6P5 420 aa5.35□□□□□ -1.55
CD46-213ENST00000471987 AAMDCQ9H7C9 122 aa5.35□□□□□ -1.55
CD46-213ENST00000471987 PRDM16Q9HAZ2 1276 aa5.35□□□□□ -1.55
CD46-213ENST00000471987 GJB4Q9NTQ9 266 aa5.35□□□□□ -1.55
CD46-213ENST00000471987 FBXO28Q9NVF7 368 aa5.35□□□□□ -1.55
CD46-213ENST00000471987 SELENONQ9NZV5 590 aa5.35□□□□□ -1.55
CD46-213ENST00000471987 ZNF112Q9UJU3 913 aa5.35□□□□□ -1.55
CD46-213ENST00000471987 SLC8A2Q9UPR5 921 aa5.35□□□□□ -1.55
CD46-213ENST00000471987 UBE2J1Q9Y385 318 aaPredicted RBP5.35□□□□□ -1.55
CD46-213ENST00000471987 A6NNC1 897 aa5.34□□□□□ -1.55
CD46-213ENST00000471987 RFPL3SP0C7P2 107 aa5.34□□□□□ -1.55
CD46-213ENST00000471987 PECAM1P16284 738 aaPredicted RBP5.34□□□□□ -1.55
CD46-213ENST00000471987 ARRB2P32121 409 aa5.34□□□□□ -1.55
CD46-213ENST00000471987 CIITAP33076 1130 aa5.34□□□□□ -1.55
CD46-213ENST00000471987 KRTAP10-6P60371 365 aaPredicted RBP5.34□□□□□ -1.55
CD46-213ENST00000471987 NSUN2Q08J23 767 aaKnown RBP eCLIP5.34□□□□□ -1.55
CD46-213ENST00000471987 TTC30AQ86WT1 665 aa5.34□□□□□ -1.55
CD46-213ENST00000471987 ANKRD13AQ8IZ07 590 aa5.34□□□□□ -1.55
CD46-213ENST00000471987 FBXL14Q8N1E6 418 aa5.34□□□□□ -1.55
CD46-213ENST00000471987 SRFBP1Q8NEF9 429 aaKnown RBP5.34□□□□□ -1.55
CD46-213ENST00000471987 TMEM174Q8WUU8 243 aa5.34□□□□□ -1.55
CD46-213ENST00000471987 MEIS3Q99687 375 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms