RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 MAGEB5Q9BZ81 275 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 CDCP1Q9H5V8 836 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 AS3MTQ9HBK9 375 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 ERVK-5Q9HDB9 667 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 PRDM11Q9NQV5 511 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 HIF1ANQ9NWT6 349 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 UTS2RQ9UKP6 389 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 ICKQ9UPZ9 632 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 TSPAN6O43657 245 aa3.96□□□□□ -1.78
PRPF40A-207ENST00000471701 ATG13O75143 517 aa3.96□□□□□ -1.78
PRPF40A-207ENST00000471701 ARP10275 920 aa3.96□□□□□ -1.78
PRPF40A-207ENST00000471701 ASIC2Q16515 512 aa3.96□□□□□ -1.78
PRPF40A-207ENST00000471701 PIK3CD-AS1Q5SR53 167 aa3.96□□□□□ -1.78
PRPF40A-207ENST00000471701 C6orf10Q5SRN2 563 aa3.96□□□□□ -1.78
PRPF40A-207ENST00000471701 USP17L6PQ6QN14 398 aa3.96□□□□□ -1.78
PRPF40A-207ENST00000471701 C18orf65Q6ZTR6 163 aa3.96□□□□□ -1.78
PRPF40A-207ENST00000471701 TTC30AQ86WT1 665 aa3.96□□□□□ -1.78
PRPF40A-207ENST00000471701 KRT78Q8N1N4 520 aa3.96□□□□□ -1.78
PRPF40A-207ENST00000471701 CLASRPQ8N2M8 674 aaKnown RBP3.96□□□□□ -1.78
PRPF40A-207ENST00000471701 GLMPQ8WWB7 406 aa3.96□□□□□ -1.78
PRPF40A-207ENST00000471701 MSI2Q96DH6 328 aaKnown RBP3.96□□□□□ -1.78
PRPF40A-207ENST00000471701 ZNF479Q96JC4 524 aa3.96□□□□□ -1.78
PRPF40A-207ENST00000471701 ARHGAP39Q9C0H5 1083 aa3.96□□□□□ -1.78
PRPF40A-207ENST00000471701 MYLK2Q9H1R3 596 aa3.96□□□□□ -1.78
PRPF40A-207ENST00000471701 TASP1Q9H6P5 420 aa3.96□□□□□ -1.78
PRPF40A-207ENST00000471701 AAMDCQ9H7C9 122 aa3.96□□□□□ -1.78
PRPF40A-207ENST00000471701 PRDM16Q9HAZ2 1276 aa3.96□□□□□ -1.78
PRPF40A-207ENST00000471701 SELENONQ9NZV5 590 aa3.96□□□□□ -1.78
PRPF40A-207ENST00000471701 SLC8A2Q9UPR5 921 aa3.96□□□□□ -1.78
PRPF40A-207ENST00000471701 CORO2BQ9UQ03 480 aa3.96□□□□□ -1.78
PRPF40A-207ENST00000471701 EVPLQ92817 2033 aa3.95□□□□□ -1.78
PRPF40A-207ENST00000471701 RPS10-NUDT3A0A1W2PQS6 291 aa3.95□□□□□ -1.78
PRPF40A-207ENST00000471701 H0YGN5 161 aa3.95□□□□□ -1.78
PRPF40A-207ENST00000471701 SPTLC2O15270 562 aa3.95□□□□□ -1.78
PRPF40A-207ENST00000471701 CBFA2T3O75081 653 aa3.95□□□□□ -1.78
PRPF40A-207ENST00000471701 CHRNB1P11230 501 aa3.95□□□□□ -1.78
PRPF40A-207ENST00000471701 CBFBQ13951 182 aa3.95□□□□□ -1.78
PRPF40A-207ENST00000471701 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.95□□□□□ -1.78
PRPF40A-207ENST00000471701 NUGGCQ68CJ6 796 aa3.95□□□□□ -1.78
PRPF40A-207ENST00000471701 LAS2Q8IYD9 372 aa3.95□□□□□ -1.78
PRPF40A-207ENST00000471701 RBMXL3Q8N7X1 1067 aaKnown RBP3.95□□□□□ -1.78
PRPF40A-207ENST00000471701 SRFBP1Q8NEF9 429 aaKnown RBP3.95□□□□□ -1.78
PRPF40A-207ENST00000471701 ASB12Q8WXK4 309 aa3.95□□□□□ -1.78
PRPF40A-207ENST00000471701 ATP2A3Q93084 1043 aa3.95□□□□□ -1.78
PRPF40A-207ENST00000471701 SNX27Q96L92 541 aa3.95□□□□□ -1.78
PRPF40A-207ENST00000471701 WDR83Q9BRX9 315 aaKnown RBP3.95□□□□□ -1.78
PRPF40A-207ENST00000471701 OBP2AQ9NY56 170 aa3.95□□□□□ -1.78
PRPF40A-207ENST00000471701 ZMYND8Q9ULU4 1186 aaPredicted RBP3.95□□□□□ -1.78
PRPF40A-207ENST00000471701 LAMP3Q9UQV4 416 aa3.95□□□□□ -1.78
PRPF40A-207ENST00000471701 TCF20Q9UGU0 1960 aaKnown RBP3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 ACOT8O14734 319 aa3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 TNFRSF13BO14836 293 aaPredicted RBP3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 KCNQ3O43525 872 aa3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 PQBP1O60828 265 aaKnown RBP3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 SRGAP2BP0DMP2 458 aa3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 MYL4P12829 197 aa3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 ALADP13716 330 aa3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 HOXB2P14652 356 aa3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 TNFRSF8P28908 595 aa3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 SLC5A2P31639 672 aa3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 ARRB2P32121 409 aa3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 DMWDQ09019 674 aa3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 HYAL1Q12794 435 aa3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 ATP1A4Q13733 1029 aa3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 CAPRIN2Q6IMN6 1127 aaKnown RBP3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 Q6ZTC4 211 aa3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 KRT27Q7Z3Y8 459 aa3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 CCDC28AQ8IWP9 274 aa3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 CCDC33Q8N5R6 958 aa3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 NUDCD2Q8WVJ2 157 aa3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 OIT3Q8WWZ8 545 aa3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 TTC17Q96AE7 1141 aa3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 ABHD14AQ9BUJ0 271 aa3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 FBXO28Q9NVF7 368 aa3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 PCDHA7Q9UN72 937 aa3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 G3BP2Q9UN86 482 aaKnown RBP3.94□□□□□ -1.78
PRPF40A-207ENST00000471701 A0A087WZ62 844 aa3.93□□□□□ -1.78
PRPF40A-207ENST00000471701 A0A0G2JK05 382 aa3.93□□□□□ -1.78
PRPF40A-207ENST00000471701 CLCA1A8K7I4 914 aa3.93□□□□□ -1.78
PRPF40A-207ENST00000471701 NFATC1O95644 943 aa3.93□□□□□ -1.78
PRPF40A-207ENST00000471701 VIPP01282 170 aa3.93□□□□□ -1.78
PRPF40A-207ENST00000471701 NFATC4Q14934 902 aa3.93□□□□□ -1.78
PRPF40A-207ENST00000471701 PGM5Q15124 567 aa3.93□□□□□ -1.78
PRPF40A-207ENST00000471701 WASHC2DQ5SRD0 308 aa3.93□□□□□ -1.78
PRPF40A-207ENST00000471701 KLHDC7AQ5VTJ3 777 aa3.93□□□□□ -1.78
PRPF40A-207ENST00000471701 LRIG3Q6UXM1 1119 aa3.93□□□□□ -1.78
PRPF40A-207ENST00000471701 KIAA0408Q6ZU52 694 aa3.93□□□□□ -1.78
PRPF40A-207ENST00000471701 C14orf80Q86SX3 495 aa3.93□□□□□ -1.78
PRPF40A-207ENST00000471701 TTC8Q8TAM2 541 aa3.93□□□□□ -1.78
PRPF40A-207ENST00000471701 ZFPM2Q8WW38 1151 aa3.93□□□□□ -1.78
PRPF40A-207ENST00000471701 EME1Q96AY2 570 aa3.93□□□□□ -1.78
PRPF40A-207ENST00000471701 MED30Q96HR3 178 aa3.93□□□□□ -1.78
PRPF40A-207ENST00000471701 CLMNQ96JQ2 1002 aa3.93□□□□□ -1.78
PRPF40A-207ENST00000471701 GPR78Q96P69 363 aa3.93□□□□□ -1.78
PRPF40A-207ENST00000471701 NUDT22Q9BRQ3 303 aa3.93□□□□□ -1.78
PRPF40A-207ENST00000471701 ELOVL1Q9BW60 279 aa3.93□□□□□ -1.78
PRPF40A-207ENST00000471701 PCDHAC1Q9H158 963 aa3.93□□□□□ -1.78
PRPF40A-207ENST00000471701 PLK2Q9NYY3 685 aa3.93□□□□□ -1.78
PRPF40A-207ENST00000471701 B3GNT3Q9Y2A9 372 aa3.93□□□□□ -1.78
PRPF40A-207ENST00000471701 NOTCH4Q99466 2003 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms