RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 CAPN9O14815 690 aa12.87□□□□□ -0.35
LINC00888-202ENST00000471496 AP5Z1O43299 807 aa12.87□□□□□ -0.35
LINC00888-202ENST00000471496 GYPCP04921 128 aa12.87□□□□□ -0.35
LINC00888-202ENST00000471496 CISD3P0C7P0 127 aa12.87□□□□□ -0.35
LINC00888-202ENST00000471496 HOXC13P31276 330 aa12.87□□□□□ -0.35
LINC00888-202ENST00000471496 SLC6A4P31645 630 aa12.87□□□□□ -0.35
LINC00888-202ENST00000471496 NOS2P35228 1153 aa12.87□□□□□ -0.35
LINC00888-202ENST00000471496 CHKAP35790 457 aa12.87□□□□□ -0.35
LINC00888-202ENST00000471496 HARS2P49590 506 aaKnown RBP12.87□□□□□ -0.35
LINC00888-202ENST00000471496 ADGRF1Q5T601 910 aa12.87□□□□□ -0.35
LINC00888-202ENST00000471496 PHF13Q86YI8 300 aaPredicted RBP12.87□□□□□ -0.35
LINC00888-202ENST00000471496 SPEM1Q8N4L4 309 aa12.87□□□□□ -0.35
LINC00888-202ENST00000471496 AZIN2Q96A70 460 aa12.87□□□□□ -0.35
LINC00888-202ENST00000471496 MYEOVQ96EZ4 313 aa12.87□□□□□ -0.35
LINC00888-202ENST00000471496 PNKPQ96T60 521 aa12.87□□□□□ -0.35
LINC00888-202ENST00000471496 NPY6RQ99463 290 aa12.87□□□□□ -0.35
LINC00888-202ENST00000471496 USB1Q9BQ65 265 aaKnown RBP12.87□□□□□ -0.35
LINC00888-202ENST00000471496 IER2Q9BTL4 223 aa12.87□□□□□ -0.35
LINC00888-202ENST00000471496 NUP58Q9BVL2 599 aa12.87□□□□□ -0.35
LINC00888-202ENST00000471496 PLK2Q9NYY3 685 aa12.87□□□□□ -0.35
LINC00888-202ENST00000471496 WDR35Q9P2L0 1181 aa12.87□□□□□ -0.35
LINC00888-202ENST00000471496 XPO7Q9UIA9 1087 aaKnown RBP12.87□□□□□ -0.35
LINC00888-202ENST00000471496 HCN2Q9UL51 889 aa12.87□□□□□ -0.35
LINC00888-202ENST00000471496 ITIH6Q6UXX5 1313 aa12.87□□□□□ -0.35
LINC00888-202ENST00000471496 GOLGA6L7A0A1B0GV03 622 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 TCRBV5S1A1TA0A578 114 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 ACSL4O60488 711 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 KAT7O95251 611 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 FLT3P36888 993 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 MATKP42679 507 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 SGSHP51688 502 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 GSCP56915 257 aaPredicted RBP12.86□□□□□ -0.35
LINC00888-202ENST00000471496 SATB1Q01826 763 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 KDSRQ06136 332 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 FBXO43Q4G163 708 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 ZC3H12AQ5D1E8 599 aaKnown RBP12.86□□□□□ -0.35
LINC00888-202ENST00000471496 FAM102AQ5T9C2 384 aaPredicted RBP12.86□□□□□ -0.35
LINC00888-202ENST00000471496 SFMBT2Q5VUG0 894 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 NUGGCQ68CJ6 796 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 HGSNATQ68CP4 663 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 RNF43Q68DV7 783 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 MON1BQ7L1V2 547 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 ARCQ7LC44 396 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 ZNF571Q7Z3V5 609 aaPredicted RBP12.86□□□□□ -0.35
LINC00888-202ENST00000471496 BNIPLQ7Z465 357 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 UNC45BQ8IWX7 931 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 NELL1Q92832 810 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 BHMTQ93088 406 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 C11orf70Q9BRQ4 267 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 HAUS4Q9H6D7 363 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 ARHGEF4Q9NR80 690 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 TAS2R14Q9NYV8 317 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 CLEC4EQ9ULY5 219 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 CAPN11Q9UMQ6 739 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 FRYLO94915 3013 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 WDR87Q6ZQQ6 2873 aa12.86□□□□□ -0.35
LINC00888-202ENST00000471496 KCNU1A8MYU2 1149 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 CHURC1-FNTBB4DL54 471 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 GOLGA8SH3BPF8 625 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 I6L893 689 aaPredicted RBP12.85□□□□□ -0.35
LINC00888-202ENST00000471496 K7ESF4 209 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 CCDC172P0C7W6 258 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 SP9P0CG40 484 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 HOXD9P28356 352 aaPredicted RBP12.85□□□□□ -0.35
LINC00888-202ENST00000471496 GRIA2P42262 883 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 KIR2DL1P43626 348 aaPredicted RBP12.85□□□□□ -0.35
LINC00888-202ENST00000471496 MMP16P51512 607 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 RNASE9P60153 205 aaKnown RBP12.85□□□□□ -0.35
LINC00888-202ENST00000471496 CDK17Q00537 523 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 NHLH1Q02575 133 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 ASIC2Q16515 512 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 PIK3R6Q5UE93 754 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 RFWD3Q6PCD5 774 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 TSSK4Q6SA08 328 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 PHLDB2Q86SQ0 1253 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 GAS2L3Q86XJ1 694 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 TERB1Q8NA31 727 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 USP33Q8TEY7 942 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 EXOC4Q96A65 974 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 PGAP3Q96FM1 320 aaPredicted RBP12.85□□□□□ -0.35
LINC00888-202ENST00000471496 PRICKLE1Q96MT3 831 aaPredicted RBP12.85□□□□□ -0.35
LINC00888-202ENST00000471496 ANLNQ9NQW6 1124 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 DNAJC17Q9NVM6 304 aaKnown RBP12.85□□□□□ -0.35
LINC00888-202ENST00000471496 POLR3BQ9NW08 1133 aaPredicted RBP12.85□□□□□ -0.35
LINC00888-202ENST00000471496 DDIT4Q9NX09 232 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC00888-202ENST00000471496 DEC1Q9P2X7 70 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 FBXO4Q9UKT5 387 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 DMDP11532 3685 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 DOCK4Q8N1I0 1966 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.85□□□□□ -0.35
LINC00888-202ENST00000471496 PRRT4C9JH25 899 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 DDX3XO00571 662 aaKnown RBP eCLIP12.85□□□□□ -0.357e-16■■■■■ 37.8
LINC00888-202ENST00000471496 LAMTOR5O43504 91 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 TSPAN3O60637 253 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 PAPSS2O95340 614 aaPredicted RBP12.85□□□□□ -0.35
LINC00888-202ENST00000471496 GJB6O95452 261 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 APODP05090 189 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 SKILP12757 684 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 NSFP46459 744 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms