RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 CBX2Q14781 532 aaPredicted RBP18.12■□□□□ 0.49
HSPG2-208ENST00000471322 RAB6CQ53S08 254 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 ANKRD20A8PQ5CZ79 823 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 PPM1LQ5SGD2 360 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 ADAMTS19Q8TE59 1207 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 P3H4Q92791 437 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 ZNF707Q96C28 371 aaPredicted RBP18.12■□□□□ 0.49
HSPG2-208ENST00000471322 FAF2Q96CS3 445 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 FAM118BQ9BPY3 351 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 FOXP3Q9BZS1 431 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 RAB6CQ9H0N0 254 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 POMKQ9H5K3 350 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 RCOR3Q9P2K3 495 aaPredicted RBP18.12■□□□□ 0.49
HSPG2-208ENST00000471322 DPP7Q9UHL4 492 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 NCOR1O75376 2440 aa18.11■□□□□ 0.49
HSPG2-208ENST00000471322 F9P00740 461 aa18.11■□□□□ 0.49
HSPG2-208ENST00000471322 USP17L7P0C7H9 530 aa18.11■□□□□ 0.49
HSPG2-208ENST00000471322 TFE3P19532 575 aaPredicted RBP18.11■□□□□ 0.49
HSPG2-208ENST00000471322 HSD17B3P37058 310 aa18.11■□□□□ 0.49
HSPG2-208ENST00000471322 GPR17Q13304 367 aa18.11■□□□□ 0.49
HSPG2-208ENST00000471322 SMAD2Q15796 467 aaKnown RBP18.11■□□□□ 0.49
HSPG2-208ENST00000471322 ELMSAN1Q6PJG2 1045 aa18.11■□□□□ 0.49
HSPG2-208ENST00000471322 SUSD6Q92537 303 aa18.11■□□□□ 0.49
HSPG2-208ENST00000471322 SMG7Q92540 1137 aaKnown RBP18.11■□□□□ 0.49
HSPG2-208ENST00000471322 NDRG1Q92597 394 aaKnown RBP18.11■□□□□ 0.49
HSPG2-208ENST00000471322 TXLNGYQ9BZA5 131 aa18.11■□□□□ 0.49
HSPG2-208ENST00000471322 PIDD1Q9HB75 910 aa18.11■□□□□ 0.49
HSPG2-208ENST00000471322 TMEM51Q9NW97 253 aa18.11■□□□□ 0.49
HSPG2-208ENST00000471322 AFF4Q9UHB7 1163 aaKnown RBP18.11■□□□□ 0.49
HSPG2-208ENST00000471322 ANAPC5Q9UJX4 755 aa18.11■□□□□ 0.49
HSPG2-208ENST00000471322 AP4E1Q9UPM8 1137 aa18.11■□□□□ 0.49
HSPG2-208ENST00000471322 USP3Q9Y6I4 520 aa18.11■□□□□ 0.49
HSPG2-208ENST00000471322 MTMR11A4FU01 709 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 YJEFN3A6XGL0 299 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 E7ENQ6 273 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 M0QYT0 321 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 AGPSO00116 658 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 APOL1O14791 398 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 IL4RP24394 825 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 STIP1P31948 543 aaKnown RBP18.1■□□□□ 0.49
HSPG2-208ENST00000471322 L1CAMP32004 1257 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 EIF3EP60228 445 aaKnown RBP18.1■□□□□ 0.49
HSPG2-208ENST00000471322 FAM193AP78312 1265 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 DEUP1Q05D60 604 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 SMARCB1Q12824 385 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 MMRN1Q13201 1228 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 ZC3H12AQ5D1E8 599 aaKnown RBP18.1■□□□□ 0.49
HSPG2-208ENST00000471322 ATAT1Q5SQI0 421 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 TPGS2Q68CL5 300 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 SLC9A4Q6AI14 798 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 VSTM1Q6UX27 236 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 GPRIN1Q7Z2K8 1008 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 GPR149Q86SP6 731 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 RSAD2Q8WXG1 361 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 HAUS1Q96CS2 278 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 PGAP3Q96FM1 320 aaPredicted RBP18.1■□□□□ 0.49
HSPG2-208ENST00000471322 ZIM3Q96PE6 472 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 DHX35Q9H5Z1 703 aaKnown RBP18.1■□□□□ 0.49
HSPG2-208ENST00000471322 PCDH9Q9HC56 1237 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 TMEM30AQ9NV96 361 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 HCFC1R1Q9NWW0 138 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 ABI2Q9NYB9 513 aaPredicted RBP18.1■□□□□ 0.49
HSPG2-208ENST00000471322 MTCL1Q9Y4B5 1905 aaKnown RBP18.1■□□□□ 0.49
HSPG2-208ENST00000471322 DOCK6Q96HP0 2047 aa18.1■□□□□ 0.49
HSPG2-208ENST00000471322 GOLGA8KD6RF30 607 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 H3BQF6 201 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 SGK1O00141 431 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 SYF2O95926 243 aaKnown RBP18.09■□□□□ 0.49
HSPG2-208ENST00000471322 RARGP13631 454 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 GRIK1P39086 918 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 PMS2P54278 862 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 NTHL1P78549 312 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 TRIP13Q15645 432 aaPredicted RBP18.09■□□□□ 0.49
HSPG2-208ENST00000471322 PUS10Q3MIT2 529 aaKnown RBP18.09■□□□□ 0.49
HSPG2-208ENST00000471322 SH3GL2Q99962 352 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 PRKD2Q9BZL6 878 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 GPATCH2LQ9NWQ4 482 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 ZDHHC7Q9NXF8 308 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 FZD10Q9ULW2 581 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 NAALADL1Q9UQQ1 740 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 FAM50BQ9Y247 325 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 INSL5Q9Y5Q6 135 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 TRIM66O15016 1216 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 FYNP06241 537 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 NCAM1P13591 858 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 ARL4AP40617 200 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 MAGEA11P43364 429 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 NR2C2P49116 596 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 ITGA8P53708 1063 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 EIF3BP55884 814 aaKnown RBP18.09■□□□□ 0.49
HSPG2-208ENST00000471322 TWF1Q12792 350 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 NOMO1Q15155 1222 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 PPP6R3Q5H9R7 873 aaPredicted RBP18.09■□□□□ 0.49
HSPG2-208ENST00000471322 SYPL2Q5VXT5 272 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 RHBDF2Q6PJF5 856 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 CCDC149Q6ZUS6 474 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 GRASPQ7Z6J2 395 aaPredicted RBP18.09■□□□□ 0.49
HSPG2-208ENST00000471322 PCGF5Q86SE9 256 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 PLD5Q8N7P1 536 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 UBLCP1Q8WVY7 318 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms