RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, human

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCFC2-205	ENST00000470197	LENG8	Q96PV6	779 aa	Predicted RBP	5.19	□□□□□ -1.58
GCFC2-205	ENST00000470197	C11orf84	Q9BUA3	381 aa	Predicted RBP	5.19	□□□□□ -1.58
GCFC2-205	ENST00000470197	MBNL3	Q9NUK0	354 aa	Known RBP	5.19	□□□□□ -1.58
GCFC2-205	ENST00000470197	CCNL1	Q9UK58	526 aa	Predicted RBP	5.19	□□□□□ -1.58
GCFC2-205	ENST00000470197	CLCA2	Q9UQC9	943 aa		5.19	□□□□□ -1.58
GCFC2-205	ENST00000470197	KIF1A	Q12756	1690 aa		5.19	□□□□□ -1.58
GCFC2-205	ENST00000470197		A0A1W2PQF6	199 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	GTPBP1	O00178	669 aa	Known RBP	5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	RNASE1	P07998	156 aa	Known RBP	5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	MAMLD1	Q13495	774 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	MON1A	Q86VX9	555 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	IQCA1	Q86XH1	822 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	SCAMP4	Q969E2	229 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	RNFT2	Q96EX2	444 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	SPATA25	Q9BR10	227 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	MKLN1	Q9UL63	735 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	HDAC5	Q9UQL6	1122 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	SNX14	Q9Y5W7	946 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	TULP4	Q9NRJ4	1543 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	BRD4	O60885	1362 aa	Predicted RBP	5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	TTC21A	Q8NDW8	1320 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	CCP110	O43303	1012 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	SCGB1D1	O95968	90 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	SLC5A2	P31639	672 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	VIPR2	P41587	438 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	RNASE9	P60153	205 aa	Known RBP	5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	HGFAC	Q04756	655 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	PSMD6	Q15008	389 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	SEC23B	Q15437	767 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	USP17L6P	Q6QN14	398 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	CFAP52	Q8N1V2	620 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	KLHL4	Q9C0H6	718 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	RLIM	Q9NVW2	624 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	ACAD8	Q9UKU7	415 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	SARDH	Q9UL12	918 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	CCDC7	Q96M83	1385 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	IRAK1	P51617	712 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	NAP1L1	P55209	391 aa	Known RBP	5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	YBEY	P58557	167 aa	Predicted RBP	5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	TMEM115	Q12893	351 aa	Predicted RBP	5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	SUSD1	Q6UWL2	747 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	LDHD	Q86WU2	507 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	SUN3	Q8TAQ9	357 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	RSC1A1	Q92681	617 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	VPS33A	Q96AX1	596 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	CNDP2	Q96KP4	475 aa	Known RBP	5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	CCDC134	Q9H6E4	229 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	AGO3	Q9H9G7	860 aa	Known RBP	5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	UNKL	Q9H9P5	680 aa	Known RBP	5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	POLR1B	Q9H9Y6	1135 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	DNAJB9	Q9UBS3	223 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	ADGRB2	O60241	1585 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	CPD	O75976	1380 aa		5.18	□□□□□ -1.58
GCFC2-205	ENST00000470197	FLT1	P17948	1338 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	COL22A1	Q8NFW1	1626 aa	Predicted RBP	5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	CCDC196	A0A1B0GTZ2	297 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	TFRC	P02786	760 aa	Known RBP	5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	MPO	P05164	745 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	PSMC2	P35998	433 aa	Known RBP	5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	LIMS1	P48059	325 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	DGKE	P52429	567 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	SLC9B1	Q4ZJI4	515 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	DCLRE1A	Q6PJP8	1040 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	SLC2A7	Q6PXP3	512 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	CXXC5	Q7LFL8	322 aa	Known RBP	5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	TMEFF1	Q8IYR6	380 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	INTS4	Q96HW7	963 aa	Known RBP	5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	EYA3	Q99504	573 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	ZNF552	Q9H707	407 aa	Predicted RBP	5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	PAK6	Q9NQU5	681 aa	Predicted RBP	5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	PLA2G3	Q9NZ20	509 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	MOCS1	Q9NZB8	636 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	CA14	Q9ULX7	337 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	SSX2IP	Q9Y2D8	614 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	ATP7B	P35670	1465 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	MATN2	O00339	956 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	PDE8B	O95263	885 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	PAFAH1B1	P43034	410 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	CBWD5	Q5RIA9	395 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	PRR31	Q5SQ13	230 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	UBXN11	Q5T124	520 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	TMEM108	Q6UXF1	575 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	CLEC9A	Q6UXN8	241 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	AVL9	Q8NBF6	648 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	NFKBID	Q8NI38	313 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	NPIPB3	Q92617	1050 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	MARS2	Q96GW9	593 aa	Known RBP	5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	TMEM209	Q96SK2	561 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	TRIM5	Q9C035	493 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	OPA3	Q9H6K4	179 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	HSFX1	Q9UBD0	423 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	DNAJB11	Q9UBS4	358 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	SLCO3A1	Q9UIG8	710 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	RIMKLB	Q9ULI2	386 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	ADAM18	Q9Y3Q7	739 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	DISP2	A7MBM2	1401 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	PLA2G1B	P04054	148 aa	Known RBP	5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	IDE	P14735	1019 aa		5.17	□□□□□ -1.58
GCFC2-205	ENST00000470197	NFIX	Q14938	502 aa		5.17	□□□□□ -1.58

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