RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 NXPE3Q969Y0 559 aa21.54■■□□□ 1.04
BRAF-202ENST00000469930 AP4E1Q9UPM8 1137 aa21.54■■□□□ 1.04
BRAF-202ENST00000469930 NR2E1Q9Y466 385 aa21.54■■□□□ 1.04
BRAF-202ENST00000469930 ESPNB1AK53 854 aa21.53■■□□□ 1.04
BRAF-202ENST00000469930 PRLRP16471 622 aa21.53■■□□□ 1.04
BRAF-202ENST00000469930 SSR1P43307 286 aaKnown RBP21.53■■□□□ 1.04
BRAF-202ENST00000469930 RWDD2BP57060 319 aa21.53■■□□□ 1.04
BRAF-202ENST00000469930 COPS2P61201 443 aa21.53■■□□□ 1.04
BRAF-202ENST00000469930 TAZQ16635 292 aa21.53■■□□□ 1.04
BRAF-202ENST00000469930 MANEALQ5VSG8 457 aa21.53■■□□□ 1.04
BRAF-202ENST00000469930 MAP7D3Q8IWC1 876 aa21.53■■□□□ 1.04
BRAF-202ENST00000469930 RCOR2Q8IZ40 523 aa21.53■■□□□ 1.04
BRAF-202ENST00000469930 TSC1Q92574 1164 aa21.53■■□□□ 1.04
BRAF-202ENST00000469930 KRT35Q92764 455 aa21.53■■□□□ 1.04
BRAF-202ENST00000469930 WDR24Q96S15 920 aa21.53■■□□□ 1.04
BRAF-202ENST00000469930 SMG9Q9H0W8 520 aaKnown RBP21.53■■□□□ 1.04
BRAF-202ENST00000469930 ZWILCHQ9H900 591 aa21.53■■□□□ 1.04
BRAF-202ENST00000469930 PRDM16Q9HAZ2 1276 aa21.53■■□□□ 1.04
BRAF-202ENST00000469930 IGLV3-10A0A075B6K4 115 aa21.52■■□□□ 1.04
BRAF-202ENST00000469930 ZRANB2O95218 330 aaKnown RBP eCLIP21.52■■□□□ 1.04
BRAF-202ENST00000469930 CHKAP35790 457 aa21.52■■□□□ 1.04
BRAF-202ENST00000469930 FCHO2Q0JRZ9 810 aa21.52■■□□□ 1.04
BRAF-202ENST00000469930 AAK1Q2M2I8 961 aa21.52■■□□□ 1.04
BRAF-202ENST00000469930 FAM133BQ5BKY9 247 aaKnown RBP21.52■■□□□ 1.04
BRAF-202ENST00000469930 MS4A13Q5J8X5 152 aa21.52■■□□□ 1.04
BRAF-202ENST00000469930 KCNT1Q5JUK3 1230 aa21.52■■□□□ 1.04
BRAF-202ENST00000469930 ARTNQ5T4W7 220 aa21.52■■□□□ 1.04
BRAF-202ENST00000469930 PIK3R6Q5UE93 754 aa21.52■■□□□ 1.04
BRAF-202ENST00000469930 PAPD7Q5XG87 772 aaKnown RBP21.52■■□□□ 1.04
BRAF-202ENST00000469930 NADSYN1Q6IA69 706 aa21.52■■□□□ 1.04
BRAF-202ENST00000469930 PTCRAQ6ISU1 281 aaPredicted RBP21.52■■□□□ 1.04
BRAF-202ENST00000469930 DENND1CQ8IV53 801 aa21.52■■□□□ 1.04
BRAF-202ENST00000469930 MFSD6LQ8IWD5 586 aa21.52■■□□□ 1.04
BRAF-202ENST00000469930 ZNF683Q8IZ20 524 aa21.52■■□□□ 1.04
BRAF-202ENST00000469930 RIN3Q8TB24 985 aa21.52■■□□□ 1.04
BRAF-202ENST00000469930 BPIFB1Q8TDL5 484 aa21.52■■□□□ 1.04
BRAF-202ENST00000469930 DEPDC1BQ8WUY9 529 aa21.52■■□□□ 1.04
BRAF-202ENST00000469930 RSPRY1Q96DX4 576 aa21.52■■□□□ 1.04
BRAF-202ENST00000469930 LRRC3BQ96PB8 259 aa21.52■■□□□ 1.04
BRAF-202ENST00000469930 CARD9Q9H257 536 aa21.52■■□□□ 1.04
BRAF-202ENST00000469930 PPARGC1AQ9UBK2 798 aaKnown RBP21.52■■□□□ 1.04
BRAF-202ENST00000469930 OR12D3Q9UGF7 316 aa21.52■■□□□ 1.04
BRAF-202ENST00000469930 EFR3BQ9Y2G0 817 aa21.52■■□□□ 1.04
BRAF-202ENST00000469930 HS3ST4Q9Y661 456 aa21.52■■□□□ 1.04
BRAF-202ENST00000469930 BRWD1Q9NSI6 2320 aa21.52■■□□□ 1.04
BRAF-202ENST00000469930 DRGXA6NNA5 263 aa21.51■■□□□ 1.03
BRAF-202ENST00000469930 HEPACAM2A8MVW5 462 aa21.51■■□□□ 1.03
BRAF-202ENST00000469930 CES2O00748 559 aa21.51■■□□□ 1.03
BRAF-202ENST00000469930 IRF1P10914 325 aa21.51■■□□□ 1.03
BRAF-202ENST00000469930 KDELR1P24390 212 aa21.51■■□□□ 1.03
BRAF-202ENST00000469930 HOXC13P31276 330 aa21.51■■□□□ 1.03
BRAF-202ENST00000469930 PTPN7P35236 360 aa21.51■■□□□ 1.03
BRAF-202ENST00000469930 ATP13A4Q4VNC1 1196 aa21.51■■□□□ 1.03
BRAF-202ENST00000469930 TANGO2Q6ICL3 276 aa21.51■■□□□ 1.03
BRAF-202ENST00000469930 TDRD5Q8NAT2 981 aaKnown RBP21.51■■□□□ 1.03
BRAF-202ENST00000469930 ALG3Q92685 438 aa21.51■■□□□ 1.03
BRAF-202ENST00000469930 FAF2Q96CS3 445 aa21.51■■□□□ 1.03
BRAF-202ENST00000469930 RBM41Q96IZ5 413 aaKnown RBP21.51■■□□□ 1.03
BRAF-202ENST00000469930 NAPGQ99747 312 aaPredicted RBP21.51■■□□□ 1.03
BRAF-202ENST00000469930 ZNF670Q9BS34 389 aa21.51■■□□□ 1.03
BRAF-202ENST00000469930 DHX35Q9H5Z1 703 aaKnown RBP21.51■■□□□ 1.03
BRAF-202ENST00000469930 PCDH18Q9HCL0 1135 aa21.51■■□□□ 1.03
BRAF-202ENST00000469930 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.51■■□□□ 1.03
BRAF-202ENST00000469930 XPO7Q9UIA9 1087 aaKnown RBP21.51■■□□□ 1.03
BRAF-202ENST00000469930 CTAGE9A4FU28 777 aa21.5■■□□□ 1.03
BRAF-202ENST00000469930 C3orf70A6NLC5 250 aaPredicted RBP21.5■■□□□ 1.03
BRAF-202ENST00000469930 VIPR2P41587 438 aa21.5■■□□□ 1.03
BRAF-202ENST00000469930 MARCKSL1P49006 195 aa21.5■■□□□ 1.03
BRAF-202ENST00000469930 HTR4Q13639 388 aa21.5■■□□□ 1.03
BRAF-202ENST00000469930 AUHQ13825 339 aaKnown RBP21.5■■□□□ 1.03
BRAF-202ENST00000469930 CA9Q16790 459 aa21.5■■□□□ 1.03
BRAF-202ENST00000469930 SMTNL2Q2TAL5 461 aa21.5■■□□□ 1.03
BRAF-202ENST00000469930 MPP7Q5T2T1 576 aa21.5■■□□□ 1.03
BRAF-202ENST00000469930 BBS7Q8IWZ6 715 aa21.5■■□□□ 1.03
BRAF-202ENST00000469930 KCTD6Q8NC69 237 aa21.5■■□□□ 1.03
BRAF-202ENST00000469930 OSCP1Q8WVF1 389 aa21.5■■□□□ 1.03
BRAF-202ENST00000469930 RAPGEF5Q92565 580 aa21.5■■□□□ 1.03
BRAF-202ENST00000469930 HSPH1Q92598 858 aa21.5■■□□□ 1.03
BRAF-202ENST00000469930 KCTD15Q96SI1 283 aaPredicted RBP21.5■■□□□ 1.03
BRAF-202ENST00000469930 EPAS1Q99814 870 aa21.5■■□□□ 1.03
BRAF-202ENST00000469930 TMPRSS4Q9NRS4 437 aa21.5■■□□□ 1.03
BRAF-202ENST00000469930 THG1LQ9NWX6 298 aaKnown RBP21.5■■□□□ 1.03
BRAF-202ENST00000469930 PRKAG3Q9UGI9 489 aa21.5■■□□□ 1.03
BRAF-202ENST00000469930 KIF26AQ9ULI4 1882 aaPredicted RBP21.49■■□□□ 1.03
BRAF-202ENST00000469930 MOCS2O96007 188 aaPredicted RBP21.49■■□□□ 1.03
BRAF-202ENST00000469930 TACR2P21452 398 aa21.49■■□□□ 1.03
BRAF-202ENST00000469930 IL4RP24394 825 aa21.49■■□□□ 1.03
BRAF-202ENST00000469930 CDH6P55285 790 aa21.49■■□□□ 1.03
BRAF-202ENST00000469930 PPP2R5EQ16537 467 aa21.49■■□□□ 1.03
BRAF-202ENST00000469930 TTC39BQ5VTQ0 682 aaPredicted RBP21.49■■□□□ 1.03
BRAF-202ENST00000469930 RNF43Q68DV7 783 aa21.49■■□□□ 1.03
BRAF-202ENST00000469930 VITQ6UXI7 678 aa21.49■■□□□ 1.03
BRAF-202ENST00000469930 LRRC31Q6UY01 552 aa21.49■■□□□ 1.03
BRAF-202ENST00000469930 PBKQ96KB5 322 aa21.49■■□□□ 1.03
BRAF-202ENST00000469930 FAM83CQ9BQN1 747 aa21.49■■□□□ 1.03
BRAF-202ENST00000469930 GPATCH2LQ9NWQ4 482 aa21.49■■□□□ 1.03
BRAF-202ENST00000469930 THEGQ9P2T0 379 aa21.49■■□□□ 1.03
BRAF-202ENST00000469930 SNX12Q9UMY4 172 aa21.49■■□□□ 1.03
BRAF-202ENST00000469930 PACSIN2Q9UNF0 486 aaPredicted RBP21.49■■□□□ 1.03
BRAF-202ENST00000469930 WASH4PA8MWX3 477 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms