RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 TFB1MQ8WVM0 346 aaKnown RBP18.73■□□□□ 0.59
SMC4-211ENST00000469858 AUTS2Q8WXX7 1259 aa18.73■□□□□ 0.59
SMC4-211ENST00000469858 CPT1BQ92523 772 aa18.73■□□□□ 0.59
SMC4-211ENST00000469858 PRCCQ92733 491 aaPredicted RBP18.73■□□□□ 0.59
SMC4-211ENST00000469858 CLIC5Q9NZA1 410 aa18.73■□□□□ 0.59
SMC4-211ENST00000469858 GOLGA8MH3BSY2 632 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 RIPK2O43353 540 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 PAGE1O75459 146 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 SEC24AO95486 1093 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 MOCS2O96007 188 aaPredicted RBP18.72■□□□□ 0.59
SMC4-211ENST00000469858 PSEN1P49768 467 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 ZNF135P52742 658 aaPredicted RBP18.72■□□□□ 0.59
SMC4-211ENST00000469858 IFFO1Q0D2I5 559 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 PPP2R5DQ14738 602 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 ANKRD22Q5VYY1 191 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 HEATR6Q6AI08 1181 aaKnown RBP18.72■□□□□ 0.59
SMC4-211ENST00000469858 TRMT10CQ7L0Y3 403 aaKnown RBP18.72■□□□□ 0.59
SMC4-211ENST00000469858 ZNF461Q8TAF7 563 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 UHMK1Q8TAS1 419 aaKnown RBP18.72■□□□□ 0.59
SMC4-211ENST00000469858 ARL8AQ96BM9 186 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 RBM15Q96T37 977 aaKnown RBP eCLIP18.72■□□□□ 0.595e-67■■■■■ 212.6
SMC4-211ENST00000469858 LGMNQ99538 433 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 FOXP3Q9BZS1 431 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 OSBPL2Q9H1P3 480 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.72■□□□□ 0.59
SMC4-211ENST00000469858 COMMD8Q9NX08 183 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 PAK5Q9P286 719 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 CARNS1A5YM72 827 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 GJB5O95377 273 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 TBX18O95935 607 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 SHBGP04278 402 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 SRGAP2BP0DMP2 458 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 CCDC110Q8TBZ0 833 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 HAPLN3Q96S86 360 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 ZBED2Q9BTP6 218 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 CYP4F11Q9HBI6 524 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 TLR6Q9Y2C9 796 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 NR2E3Q9Y5X4 410 aa18.72■□□□□ 0.59
SMC4-211ENST00000469858 NUP205Q92621 2012 aa18.71■□□□□ 0.59
SMC4-211ENST00000469858 GOLGA6L10A6NI86 522 aa18.71■□□□□ 0.59
SMC4-211ENST00000469858 HACD1B0YJ81 288 aa18.71■□□□□ 0.59
SMC4-211ENST00000469858 GOLGA8KD6RF30 607 aa18.71■□□□□ 0.59
SMC4-211ENST00000469858 ABLIM3O94929 683 aa18.71■□□□□ 0.59
SMC4-211ENST00000469858 ACSL3O95573 720 aa18.71■□□□□ 0.59
SMC4-211ENST00000469858 NUDT17P0C025 328 aa18.71■□□□□ 0.59
SMC4-211ENST00000469858 VAV1P15498 845 aa18.71■□□□□ 0.59
SMC4-211ENST00000469858 PPM1AP35813 382 aa18.71■□□□□ 0.59
SMC4-211ENST00000469858 TBX4P57082 545 aa18.71■□□□□ 0.59
SMC4-211ENST00000469858 TTMPQ5BVD1 217 aa18.71■□□□□ 0.59
SMC4-211ENST00000469858 C10orf120Q5SQS8 335 aa18.71■□□□□ 0.59
SMC4-211ENST00000469858 RWDD4Q6NW29 188 aaKnown RBP18.71■□□□□ 0.59
SMC4-211ENST00000469858 TP53INP2Q8IXH6 220 aa18.71■□□□□ 0.59
SMC4-211ENST00000469858 NAT8LQ8N9F0 302 aa18.71■□□□□ 0.59
SMC4-211ENST00000469858 OLA1Q9NTK5 396 aaKnown RBP18.71■□□□□ 0.59
SMC4-211ENST00000469858 CXXC1Q9P0U4 656 aaPredicted RBP18.71■□□□□ 0.59
SMC4-211ENST00000469858 XPO7Q9UIA9 1087 aaKnown RBP18.71■□□□□ 0.59
SMC4-211ENST00000469858 PCDHB12Q9Y5F1 795 aa18.71■□□□□ 0.59
SMC4-211ENST00000469858 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.7■□□□□ 0.58
SMC4-211ENST00000469858 TCRBV7S3A2A0A539 114 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 GYS2P54840 703 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 GAD2Q05329 585 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 AP1B1Q10567 949 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 PDK1Q15118 436 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 TPGS2Q68CL5 300 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 CEP128Q6ZU80 1094 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 PDZD4Q76G19 769 aaPredicted RBP18.7■□□□□ 0.58
SMC4-211ENST00000469858 HOOK3Q86VS8 718 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 MIB1Q86YT6 1006 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 C7orf61Q8IZ16 206 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 FIBCD1Q8N539 461 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 NPWQ8N729 165 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 CCNYQ8ND76 341 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 HTR3CQ8WXA8 447 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 FCRL2Q96LA5 508 aaPredicted RBP18.7■□□□□ 0.58
SMC4-211ENST00000469858 TTLL2Q9BWV7 592 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 CENPHQ9H3R5 247 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 PRDM12Q9H4Q4 367 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 SAYSD1Q9NPB0 183 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 RAB6BQ9NRW1 208 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 SHROOM3Q8TF72 1996 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 KCNU1A8MYU2 1149 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 PPP1R12AO14974 1030 aaPredicted RBP18.7■□□□□ 0.58
SMC4-211ENST00000469858 TMEM63AO94886 807 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 MYZAPP0CAP1 466 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 EIF3BP55884 814 aaKnown RBP18.7■□□□□ 0.58
SMC4-211ENST00000469858 KYNUQ16719 465 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 SYCP2LQ5T4T6 812 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 FAXCQ5TGI0 409 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 SLC39A13Q96H72 371 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 C9orf72Q96LT7 481 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 MRPL17Q9NRX2 175 aaKnown RBP18.7■□□□□ 0.58
SMC4-211ENST00000469858 NINJ2Q9NZG7 142 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 MARCH2Q9P0N8 246 aa18.7■□□□□ 0.58
SMC4-211ENST00000469858 FGF18O76093 207 aa18.69■□□□□ 0.58
SMC4-211ENST00000469858 TTC4O95801 387 aa18.69■□□□□ 0.58
SMC4-211ENST00000469858 CA8P35219 290 aa18.69■□□□□ 0.58
SMC4-211ENST00000469858 HTRA4P83105 476 aaPredicted RBP18.69■□□□□ 0.58
SMC4-211ENST00000469858 PRKD1Q15139 912 aaPredicted RBP18.69■□□□□ 0.58
SMC4-211ENST00000469858 HIF1AQ16665 826 aa18.69■□□□□ 0.58
SMC4-211ENST00000469858 KCTD16Q68DU8 428 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms