RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 KREMEN1Q96MU8 473 aa18.37■□□□□ 0.53
MRPL28-208ENST00000469744 FUT8Q9BYC5 575 aa18.37■□□□□ 0.53
MRPL28-208ENST00000469744 SDK1Q7Z5N4 2213 aa18.37■□□□□ 0.53
MRPL28-208ENST00000469744 CEP250Q9BV73 2442 aa18.37■□□□□ 0.53
MRPL28-208ENST00000469744 EML5Q05BV3 1969 aa18.36■□□□□ 0.53
MRPL28-208ENST00000469744 HRO43593 1189 aa18.36■□□□□ 0.53
MRPL28-208ENST00000469744 SEC31AO94979 1220 aaKnown RBP18.36■□□□□ 0.53
MRPL28-208ENST00000469744 ADH1CP00326 375 aa18.36■□□□□ 0.53
MRPL28-208ENST00000469744 CALCAP01258 141 aa18.36■□□□□ 0.53
MRPL28-208ENST00000469744 ATP5C1P36542 298 aaKnown RBP18.36■□□□□ 0.53
MRPL28-208ENST00000469744 KDSRQ06136 332 aa18.36■□□□□ 0.53
MRPL28-208ENST00000469744 SGO2Q562F6 1265 aa18.36■□□□□ 0.53
MRPL28-208ENST00000469744 C10orf120Q5SQS8 335 aa18.36■□□□□ 0.53
MRPL28-208ENST00000469744 RHOT2Q8IXI1 618 aa18.36■□□□□ 0.53
MRPL28-208ENST00000469744 PPM1KQ8N3J5 372 aa18.36■□□□□ 0.53
MRPL28-208ENST00000469744 KIAA1958Q8N8K9 716 aa18.36■□□□□ 0.53
MRPL28-208ENST00000469744 HHIPQ96QV1 700 aa18.36■□□□□ 0.53
MRPL28-208ENST00000469744 SELENOOQ9BVL4 669 aa18.36■□□□□ 0.53
MRPL28-208ENST00000469744 KLF16Q9BXK1 252 aaPredicted RBP18.36■□□□□ 0.53
MRPL28-208ENST00000469744 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.36■□□□□ 0.53
MRPL28-208ENST00000469744 TBC1D14Q9P2M4 693 aa18.36■□□□□ 0.53
MRPL28-208ENST00000469744 TSPAN16Q9UKR8 245 aa18.36■□□□□ 0.53
MRPL28-208ENST00000469744 SLC8A2Q9UPR5 921 aa18.36■□□□□ 0.53
MRPL28-208ENST00000469744 USP3Q9Y6I4 520 aa18.36■□□□□ 0.53
MRPL28-208ENST00000469744 K7EQS6 105 aa18.35■□□□□ 0.53
MRPL28-208ENST00000469744 ATG13O75143 517 aa18.35■□□□□ 0.53
MRPL28-208ENST00000469744 RTN2O75298 545 aa18.35■□□□□ 0.53
MRPL28-208ENST00000469744 FTCDO95954 541 aa18.35■□□□□ 0.53
MRPL28-208ENST00000469744 TBXAS1P24557 533 aaPredicted RBP18.35■□□□□ 0.53
MRPL28-208ENST00000469744 YWHAEP62258 255 aaKnown RBP18.35■□□□□ 0.53
MRPL28-208ENST00000469744 CBX1P83916 185 aa18.35■□□□□ 0.53
MRPL28-208ENST00000469744 PDE4CQ08493 712 aa18.35■□□□□ 0.53
MRPL28-208ENST00000469744 FBXO43Q4G163 708 aa18.35■□□□□ 0.53
MRPL28-208ENST00000469744 C2orf27AQ580R0 203 aa18.35■□□□□ 0.53
MRPL28-208ENST00000469744 TMEM270Q6UE05 265 aa18.35■□□□□ 0.53
MRPL28-208ENST00000469744 LONP2Q86WA8 852 aa18.35■□□□□ 0.53
MRPL28-208ENST00000469744 NAT16Q8N8M0 369 aa18.35■□□□□ 0.53
MRPL28-208ENST00000469744 ANKRD52Q8NB46 1076 aa18.35■□□□□ 0.53
MRPL28-208ENST00000469744 UBA3Q8TBC4 463 aa18.35■□□□□ 0.53
MRPL28-208ENST00000469744 NDRG1Q92597 394 aaKnown RBP18.35■□□□□ 0.53
MRPL28-208ENST00000469744 UBXN6Q9BZV1 441 aa18.35■□□□□ 0.53
MRPL28-208ENST00000469744 FAM124BQ9H5Z6 455 aaPredicted RBP18.35■□□□□ 0.53
MRPL28-208ENST00000469744 NOCTQ9UK39 431 aaKnown RBP18.35■□□□□ 0.53
MRPL28-208ENST00000469744 PCDHB4Q9Y5E5 795 aa18.35■□□□□ 0.53
MRPL28-208ENST00000469744 DCHS1Q96JQ0 3298 aa18.35■□□□□ 0.53
MRPL28-208ENST00000469744 GREM1O60565 184 aa18.34■□□□□ 0.53
MRPL28-208ENST00000469744 PLA2G4AP47712 749 aa18.34■□□□□ 0.53
MRPL28-208ENST00000469744 C2orf54Q08AI8 447 aa18.34■□□□□ 0.53
MRPL28-208ENST00000469744 SIM2Q14190 667 aaPredicted RBP18.34■□□□□ 0.53
MRPL28-208ENST00000469744 TMEM25Q86YD3 366 aa18.34■□□□□ 0.53
MRPL28-208ENST00000469744 MIB1Q86YT6 1006 aa18.34■□□□□ 0.53
MRPL28-208ENST00000469744 ACTRT1Q8TDG2 376 aa18.34■□□□□ 0.53
MRPL28-208ENST00000469744 EPS8L1Q8TE68 723 aa18.34■□□□□ 0.53
MRPL28-208ENST00000469744 TFAP2BQ92481 460 aa18.34■□□□□ 0.53
MRPL28-208ENST00000469744 SPAG17Q6Q759 2223 aa18.34■□□□□ 0.53
MRPL28-208ENST00000469744 MTA2O94776 668 aa18.33■□□□□ 0.53
MRPL28-208ENST00000469744 TNFRSF8P28908 595 aa18.33■□□□□ 0.53
MRPL28-208ENST00000469744 CXCR5P32302 372 aa18.33■□□□□ 0.53
MRPL28-208ENST00000469744 TKTL1P51854 596 aa18.33■□□□□ 0.53
MRPL28-208ENST00000469744 BCAT1P54687 386 aa18.33■□□□□ 0.53
MRPL28-208ENST00000469744 SLC8A3P57103 927 aa18.33■□□□□ 0.53
MRPL28-208ENST00000469744 ANO4Q32M45 955 aa18.33■□□□□ 0.53
MRPL28-208ENST00000469744 RAB41Q5JT25 222 aa18.33■□□□□ 0.53
MRPL28-208ENST00000469744 PEX26Q7Z412 305 aa18.33■□□□□ 0.53
MRPL28-208ENST00000469744 NT5DC3Q86UY8 548 aa18.33■□□□□ 0.53
MRPL28-208ENST00000469744 SLC35G2Q8TBE7 412 aa18.33■□□□□ 0.53
MRPL28-208ENST00000469744 OTUB2Q96DC9 234 aa18.33■□□□□ 0.53
MRPL28-208ENST00000469744 ULBP1Q9BZM6 244 aa18.33■□□□□ 0.53
MRPL28-208ENST00000469744 ZDHHC4Q9NPG8 344 aa18.33■□□□□ 0.53
MRPL28-208ENST00000469744 SPHK2Q9NRA0 654 aa18.33■□□□□ 0.53
MRPL28-208ENST00000469744 HESX1Q9UBX0 185 aa18.33■□□□□ 0.53
MRPL28-208ENST00000469744 RASAL2Q9UJF2 1139 aa18.33■□□□□ 0.53
MRPL28-208ENST00000469744 DNMT3LQ9UJW3 386 aa18.33■□□□□ 0.53
MRPL28-208ENST00000469744 AMFRQ9UKV5 643 aa18.33■□□□□ 0.53
MRPL28-208ENST00000469744 RAB23Q9ULC3 237 aa18.33■□□□□ 0.53
MRPL28-208ENST00000469744 O00370 1275 aa18.33■□□□□ 0.52
MRPL28-208ENST00000469744 SASH3O75995 380 aa18.33■□□□□ 0.52
MRPL28-208ENST00000469744 VDRP11473 427 aa18.33■□□□□ 0.52
MRPL28-208ENST00000469744 CHRNB2P17787 502 aa18.33■□□□□ 0.52
MRPL28-208ENST00000469744 BRD2P25440 801 aaKnown RBP18.33■□□□□ 0.52
MRPL28-208ENST00000469744 HOXA6P31267 233 aa18.33■□□□□ 0.52
MRPL28-208ENST00000469744 BPIFB4P59827 614 aa18.33■□□□□ 0.52
MRPL28-208ENST00000469744 FAM193AP78312 1265 aa18.33■□□□□ 0.52
MRPL28-208ENST00000469744 CDR2Q01850 454 aa18.33■□□□□ 0.52
MRPL28-208ENST00000469744 BST2Q10589 180 aaKnown RBP18.33■□□□□ 0.52
MRPL28-208ENST00000469744 DMC1Q14565 340 aa18.33■□□□□ 0.52
MRPL28-208ENST00000469744 CCNI2Q6ZMN8 369 aaPredicted RBP18.33■□□□□ 0.52
MRPL28-208ENST00000469744 HTR3DQ70Z44 454 aa18.33■□□□□ 0.52
MRPL28-208ENST00000469744 WDR5BQ86VZ2 330 aa18.33■□□□□ 0.52
MRPL28-208ENST00000469744 ZNF677Q86XU0 584 aa18.33■□□□□ 0.52
MRPL28-208ENST00000469744 CCDC33Q8N5R6 958 aa18.33■□□□□ 0.52
MRPL28-208ENST00000469744 USP33Q8TEY7 942 aa18.33■□□□□ 0.52
MRPL28-208ENST00000469744 SLC20A1Q8WUM9 679 aa18.33■□□□□ 0.52
MRPL28-208ENST00000469744 HES6Q96HZ4 224 aa18.33■□□□□ 0.52
MRPL28-208ENST00000469744 ZSWIM1Q9BR11 485 aa18.33■□□□□ 0.52
MRPL28-208ENST00000469744 VIPAS39Q9H9C1 493 aa18.33■□□□□ 0.52
MRPL28-208ENST00000469744 ARHGEF4Q9NR80 690 aa18.33■□□□□ 0.52
MRPL28-208ENST00000469744 TMEM59LQ9UK28 342 aa18.33■□□□□ 0.52
MRPL28-208ENST00000469744 MYO18AQ92614 2054 aaKnown RBP18.32■□□□□ 0.52
MRPL28-208ENST00000469744 XPO1O14980 1071 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms