RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 STC2O76061 302 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 CXCR5P32302 372 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 GTF2F1P35269 517 aaKnown RBP eCLIP8.45□□□□□ -1.06
NPHP3-204ENST00000469232 LTBRP36941 435 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 TBX4P57082 545 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 ZXDBP98169 803 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 RBM10P98175 930 aaKnown RBP8.45□□□□□ -1.06
NPHP3-204ENST00000469232 EFEMP1Q12805 493 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 IFRD2Q12894 506 aaPredicted RBP8.45□□□□□ -1.06
NPHP3-204ENST00000469232 DPYSQ14117 519 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 SLC5A9Q2M3M2 681 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 ZC3H12AQ5D1E8 599 aaKnown RBP8.45□□□□□ -1.06
NPHP3-204ENST00000469232 TFDP3Q5H9I0 405 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 KCNT1Q5JUK3 1230 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 C10orf120Q5SQS8 335 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 NUGGCQ68CJ6 796 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 DRICH1Q6PGQ1 229 aaPredicted RBP8.45□□□□□ -1.06
NPHP3-204ENST00000469232 SND1Q7KZF4 910 aaKnown RBP eCLIP8.45□□□□□ -1.06
NPHP3-204ENST00000469232 MAP7D3Q8IWC1 876 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 UNC45BQ8IWX7 931 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 PQLC3Q8N755 202 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 C12orf50Q8NA57 414 aaPredicted RBP8.45□□□□□ -1.06
NPHP3-204ENST00000469232 ADAM32Q8TC27 787 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 MRPS31Q92665 395 aaKnown RBP8.45□□□□□ -1.06
NPHP3-204ENST00000469232 MSLNLQ96KJ4 702 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 RPGRIP1Q96KN7 1286 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 BTN2A3PQ96KV6 586 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 SLC22A12Q96S37 553 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 NAP1L3Q99457 506 aaPredicted RBP8.45□□□□□ -1.06
NPHP3-204ENST00000469232 SLC46A2Q9BY10 475 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 OSBPL8Q9BZF1 889 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 TRPV4Q9HBA0 871 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.45□□□□□ -1.06
NPHP3-204ENST00000469232 HCFC1R1Q9NWW0 138 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 SFMBT1Q9UHJ3 866 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 REV3LO60673 3130 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 C2orf16Q68DN1 1984 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 DRGXA6NNA5 263 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 FAM72CH0Y354 149 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 MSI1O43347 362 aaKnown RBP8.44□□□□□ -1.06
NPHP3-204ENST00000469232 CEP104O60308 925 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 PAGE1O75459 146 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 KLKB1P03952 638 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 KRT1P04264 644 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 CD48P09326 243 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 CA8P35219 290 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 CKAP4Q07065 602 aaKnown RBP8.44□□□□□ -1.06
NPHP3-204ENST00000469232 NME3Q13232 169 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 TAF12Q16514 161 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 SMTNL2Q2TAL5 461 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 ARL13BQ3SXY8 428 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 EFHC2Q5JST6 749 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 FAM72AQ5TYM5 149 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 FAM72DQ6L9T8 149 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 AADACL2Q6P093 401 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 HTR3DQ70Z44 454 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 RSRC2Q7L4I2 434 aaKnown RBP8.44□□□□□ -1.06
NPHP3-204ENST00000469232 RBM23Q86U06 439 aaKnown RBP8.44□□□□□ -1.06
NPHP3-204ENST00000469232 FAM72BQ86X60 149 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 CEP112Q8N8E3 955 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 PRELID2Q8N945 189 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 PCDH19Q8TAB3 1148 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 MAIP1Q8WWC4 291 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 ZNF592Q92610 1267 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 TCEAL4Q96EI5 215 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 MS4A14Q96JA4 679 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 CSPG4P5Q96PW8 444 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 RNF157Q96PX1 679 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 CORO1BQ9BR76 489 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 FRMD8P1Q9BZ68 369 aaPredicted RBP8.44□□□□□ -1.06
NPHP3-204ENST00000469232 MAGEB5Q9BZ81 275 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 TKTL2Q9H0I9 626 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 ADAM7Q9H2U9 754 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 PRDM12Q9H4Q4 367 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 ZWILCHQ9H900 591 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 CWC15Q9P013 229 aaKnown RBP8.44□□□□□ -1.06
NPHP3-204ENST00000469232 PPARGC1AQ9UBK2 798 aaKnown RBP8.44□□□□□ -1.06
NPHP3-204ENST00000469232 ZNF212Q9UDV6 495 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 NUDT5Q9UKK9 219 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 NR2E1Q9Y466 385 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 DENND4AQ7Z401 1863 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 HELZP42694 1942 aaKnown RBP8.44□□□□□ -1.06
NPHP3-204ENST00000469232 PRRC2BQ5JSZ5 2229 aaKnown RBP8.44□□□□□ -1.06
NPHP3-204ENST00000469232 MYO9BQ13459 2157 aa8.44□□□□□ -1.06
NPHP3-204ENST00000469232 NUP210Q8TEM1 1887 aaPredicted RBP8.44□□□□□ -1.06
NPHP3-204ENST00000469232 KIF26AQ9ULI4 1882 aaPredicted RBP8.44□□□□□ -1.06
NPHP3-204ENST00000469232 TRAV19A0A0A6YYK7 116 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 A0A1W2PRU2 124 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 TCRBV7S2A1N4TA0A589 114 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 SLC12A8A0AV02 714 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 LRRD1A4D1F6 860 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 PI4K2BG5E9Z4 385 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 CCDC188H7C350 402 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 DCLK1O15075 740 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 LINC01565O15544 149 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 FGGP02679 453 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 HDCP19113 662 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 CETN2P41208 172 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 CDH6P55285 790 aa8.43□□□□□ -1.06
NPHP3-204ENST00000469232 ADCY2Q08462 1091 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms