RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 LOXL4Q96JB6 756 aa13.49□□□□□ -0.25
CLRN1-204ENST00000468836 BTN2A3PQ96KV6 586 aa13.49□□□□□ -0.25
CLRN1-204ENST00000468836 FCRL2Q96LA5 508 aaPredicted RBP13.49□□□□□ -0.25
CLRN1-204ENST00000468836 ACOX2Q99424 681 aa13.49□□□□□ -0.25
CLRN1-204ENST00000468836 BPIFA3Q9BQP9 254 aa13.49□□□□□ -0.25
CLRN1-204ENST00000468836 ABCB8Q9NUT2 735 aa13.49□□□□□ -0.25
CLRN1-204ENST00000468836 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLRN1-204ENST00000468836 ELOVL2Q9NXB9 296 aa13.49□□□□□ -0.25
CLRN1-204ENST00000468836 RRN3Q9NYV6 651 aa13.49□□□□□ -0.25
CLRN1-204ENST00000468836 GGA2Q9UJY4 613 aa13.49□□□□□ -0.25
CLRN1-204ENST00000468836 PLA2G4CQ9UP65 541 aa13.49□□□□□ -0.25
CLRN1-204ENST00000468836 CACNA1IQ9P0X4 2223 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 FAM170AA1A519 330 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 H0Y626 953 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 DCLK1O15075 740 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 FOXD2O60548 495 aaPredicted RBP13.48□□□□□ -0.25
CLRN1-204ENST00000468836 LRP3O75074 770 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 MOCS3O95396 460 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 ATP5BP06576 529 aaKnown RBP13.48□□□□□ -0.25
CLRN1-204ENST00000468836 MMEP08473 750 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 CCDC172P0C7W6 258 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 PABPC1P11940 636 aaKnown RBP13.48□□□□□ -0.25
CLRN1-204ENST00000468836 ZNF18P17022 549 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 NOS2P35228 1153 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 SULT1E1P49888 294 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 KLHL40Q2TBA0 621 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 PLK5Q496M5 336 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 FNDC3BQ53EP0 1204 aaKnown RBP13.48□□□□□ -0.25
CLRN1-204ENST00000468836 FAM133BQ5BKY9 247 aaKnown RBP13.48□□□□□ -0.25
CLRN1-204ENST00000468836 MPP7Q5T2T1 576 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 PIK3R6Q5UE93 754 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 NAA35Q5VZE5 725 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 RAP1GAP2Q684P5 730 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 KIAA1324Q6UXG2 1013 aaKnown RBP13.48□□□□□ -0.25
CLRN1-204ENST00000468836 CHST9Q7L1S5 443 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 SLC26A9Q7LBE3 791 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 LGI2Q8N0V4 545 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 SLC39A13Q96H72 371 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 SLC2A13Q96QE2 648 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 GABRG3Q99928 467 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 ARRDC1-AS1Q9H2J1 176 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.48□□□□□ -0.25
CLRN1-204ENST00000468836 SIK3Q9Y2K2 1263 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 PAXBP1Q9Y5B6 917 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 RAD54BQ9Y620 910 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 STON1Q9Y6Q2 735 aa13.48□□□□□ -0.25
CLRN1-204ENST00000468836 SYCE3A1L190 88 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 PRR5-ARHGAP8B1AHC4 643 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 GOLGA8SH3BPF8 625 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 M0QYT0 321 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 ZNF217O75362 1048 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 EPN2O95208 641 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 SERPINC1P01008 464 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 EPHX1P07099 455 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 ATP1A3P13637 1013 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 POLR2EP19388 210 aaKnown RBP13.47□□□□□ -0.25
CLRN1-204ENST00000468836 TACR2P21452 398 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 SDHBP21912 280 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 HLA-FP30511 346 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 SLC6A4P31645 630 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 CDH5P33151 784 aaPredicted RBP13.47□□□□□ -0.25
CLRN1-204ENST00000468836 ID4P47928 161 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 DHPSP49366 369 aaPredicted RBP13.47□□□□□ -0.25
CLRN1-204ENST00000468836 SGSHP51688 502 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 ST8SIA6P61647 398 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 ARHGAP8P85298 464 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 CDR2Q01850 454 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 CREB5Q02930 508 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 NCAPHQ15003 741 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 AASDHQ4L235 1098 aaPredicted RBP13.47□□□□□ -0.25
CLRN1-204ENST00000468836 MS4A13Q5J8X5 152 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 RABGAP1LQ5R372 815 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 DPY19L2P1Q6NXN4 242 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 TRIM72Q6ZMU5 477 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 LPCAT2Q7L5N7 544 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 RLN3Q8WXF3 142 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 CPA5Q8WXQ8 436 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 ZC3H10Q96K80 434 aaKnown RBP13.47□□□□□ -0.25
CLRN1-204ENST00000468836 PRICKLE1Q96MT3 831 aaPredicted RBP13.47□□□□□ -0.25
CLRN1-204ENST00000468836 ERGIC2Q96RQ1 377 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 NUCKS1Q9H1E3 243 aaKnown RBP13.47□□□□□ -0.25
CLRN1-204ENST00000468836 SEMA4GQ9NTN9 838 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 CALCOCO1Q9P1Z2 691 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 THAP10Q9P2Z0 257 aaPredicted RBP13.47□□□□□ -0.25
CLRN1-204ENST00000468836 CDV3Q9UKY7 258 aaKnown RBP13.47□□□□□ -0.25
CLRN1-204ENST00000468836 CLEC4EQ9ULY5 219 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 PCDHGA5Q9Y5G8 931 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 MYO15AQ9UKN7 3530 aa13.47□□□□□ -0.25
CLRN1-204ENST00000468836 KCNU1A8MYU2 1149 aa13.46□□□□□ -0.25
CLRN1-204ENST00000468836 GOLGA6L19H0YKK7 550 aa13.46□□□□□ -0.25
CLRN1-204ENST00000468836 EPHB6O15197 1021 aa13.46□□□□□ -0.25
CLRN1-204ENST00000468836 ACADMP11310 421 aa13.46□□□□□ -0.25
CLRN1-204ENST00000468836 GABRG2P18507 467 aa13.46□□□□□ -0.25
CLRN1-204ENST00000468836 SCNN1AP37088 669 aa13.46□□□□□ -0.25
CLRN1-204ENST00000468836 P2RY2P41231 377 aa13.46□□□□□ -0.25
CLRN1-204ENST00000468836 MATKP42679 507 aa13.46□□□□□ -0.25
CLRN1-204ENST00000468836 IL12RB1P42701 662 aa13.46□□□□□ -0.25
CLRN1-204ENST00000468836 NSFP46459 744 aaKnown RBP13.46□□□□□ -0.25
CLRN1-204ENST00000468836 JAM2P57087 298 aa13.46□□□□□ -0.25
CLRN1-204ENST00000468836 RPS24P62847 133 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms