RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 SLC7A14Q8TBB6 771 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 MDM1Q8TC05 714 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 MZB1Q8WU39 189 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 SLC44A1Q8WWI5 657 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 LINC01599Q8WXQ3 324 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 DPF3Q92784 378 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 FATE1Q969F0 183 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 HDAC11Q96DB2 347 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 C1orf74Q96LT6 269 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 MAGEB18Q96M61 343 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 EPAS1Q99814 870 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 SELENOSQ9BQE4 189 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 CRISPLD2Q9H0B8 497 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 NSRP1Q9H0G5 558 aaKnown RBP7.86□□□□□ -1.15
COL6A3-208ENST00000468792 SMOC2Q9H3U7 446 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 WDCPQ9H6R7 721 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 TMEM30AQ9NV96 361 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 DNAJC17Q9NVM6 304 aaKnown RBP7.86□□□□□ -1.15
COL6A3-208ENST00000468792 ARHGEF38Q9NXL2 777 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 DONSONQ9NYP3 566 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 NKIRAS1Q9NYS0 192 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 RSPH14Q9UHP6 348 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 TRHDEQ9UKU6 1024 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 TIMM13Q9Y5L4 95 aaPredicted RBP7.86□□□□□ -1.15
COL6A3-208ENST00000468792 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.86□□□□□ -1.15
COL6A3-208ENST00000468792 IQANK1A0A1B0GTG1 560 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 TCRBV9S1A1TA0A576 114 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 KBTBD13C9JR72 458 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 ENPP3O14638 875 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 TRIM66O15016 1216 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 TM9SF1O15321 606 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 FGF10O15520 208 aaPredicted RBP7.85□□□□□ -1.15
COL6A3-208ENST00000468792 CACNG3O60359 315 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 TRPA1O75762 1119 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 ALDH1A2O94788 518 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 SUN1O94901 812 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 ZWINTO95229 277 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 ASMTLO95671 621 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 ERCC2P18074 760 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 BDNFP23560 247 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 CNTFP26441 200 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 SSTR1P30872 391 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 GRK4P32298 578 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 ELK3P41970 407 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 MSH2P43246 934 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 BRCC3P46736 316 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 COG7P83436 770 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 IL9RQ01113 521 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 SLC18A2Q05940 514 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 GALNT2Q10471 571 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 ELAVL2Q12926 359 aaKnown RBP7.85□□□□□ -1.15
COL6A3-208ENST00000468792 DNAJC3Q13217 504 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 MPP2Q14168 576 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 BBS9Q3SYG4 887 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 CLLU1OSQ5K130 101 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 LGSNQ5TDP6 509 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 STEAP4Q687X5 459 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 NUGGCQ68CJ6 796 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 MSANTD2Q6P1R3 559 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 FOXR1Q6PIV2 292 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 LRRC8DQ7L1W4 858 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 GPRIN1Q7Z2K8 1008 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 CPLX4Q7Z7G2 160 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 LRRTM3Q86VH5 581 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 MON1AQ86VX9 555 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 SLC26A11Q86WA9 606 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 SPATA2LQ8IUW3 424 aaPredicted RBP7.85□□□□□ -1.15
COL6A3-208ENST00000468792 FAM126BQ8IXS8 530 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 CACNA2D3Q8IZS8 1091 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 ZNF276Q8N554 614 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 ANKS4BQ8N8V4 417 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 RNF169Q8NCN4 708 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 CCDC110Q8TBZ0 833 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 FBF1Q8TES7 1133 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 C2orf15Q8WU43 125 aaKnown RBP7.85□□□□□ -1.15
COL6A3-208ENST00000468792 DCAKDQ8WVC6 231 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 TTC17Q96AE7 1141 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 MTBPQ96DY7 904 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 P2RY11Q96G91 374 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 SEC16BQ96JE7 1060 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 SIGLEC10Q96LC7 697 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 TSGA13Q96PP4 275 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 PPP1R2P1Q96PQ5 205 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 SMC6Q96SB8 1091 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 PAFAH2Q99487 392 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 EBNA1BP2Q99848 306 aaKnown RBP7.85□□□□□ -1.15
COL6A3-208ENST00000468792 TMEM175Q9BSA9 504 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 TRPV6Q9H1D0 765 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 TRABDQ9H4I3 376 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 FBXO44Q9H4M3 255 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 RETREG1Q9H6L5 497 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 C10orf88Q9H8K7 445 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 TBC1D13Q9NVG8 400 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 TMLHEQ9NVH6 421 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 DDIT4Q9NX09 232 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 MKS1Q9NXB0 559 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.85□□□□□ -1.15
COL6A3-208ENST00000468792 MOCS1Q9NZB8 636 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 SCML2Q9UQR0 700 aa7.85□□□□□ -1.15
COL6A3-208ENST00000468792 FAM169AQ9Y6X4 670 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms