RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 ZFXP17010 805 aaPredicted RBP16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 UBAP2LQ14157 1087 aaKnown RBP16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 DPYSL2Q16555 572 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 DNAL1Q4LDG9 190 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 CASC4Q6P4E1 433 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 RIPOR1Q6ZS17 1223 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 DENND5BQ6ZUT9 1274 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 DPP9Q86TI2 863 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 IFNLR1Q8IU57 520 aaPredicted RBP16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 ULK2Q8IYT8 1036 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 CLEC4CQ8WTT0 213 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 GTF3C2Q8WUA4 911 aaPredicted RBP16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 LPIN3Q9BQK8 851 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 C16orf70Q9BSU1 422 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 APOL6Q9BWW8 343 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 FAM124BQ9H5Z6 455 aaPredicted RBP16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 ANGPTL2Q9UKU9 493 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 PLXNA1Q9UIW2 1896 aa16.27■□□□□ 0.19
TSPAN4-211ENST00000468468 A0A1B0GVG6 124 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 SETSIPP0DME0 302 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 NR2C2P49116 596 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 SEMA5AQ13591 1074 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 TBCCQ15814 346 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 SLC30A9Q6PML9 568 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 KYAT3Q6YP21 454 aaKnown RBP16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 GPR142Q7Z601 462 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 PPTC7Q8NI37 304 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 PPP1R13LQ8WUF5 828 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 QKIQ96PU8 341 aaKnown RBP eCLIP16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 PANX3Q96QZ0 392 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 KRT82Q9NSB4 513 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 SLC17A6Q9P2U8 582 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 PLXNB2O15031 1838 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 SCN4AP35499 1836 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 LYPLA1O75608 230 aaPredicted RBP16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 ATP5BP06576 529 aaKnown RBP16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 CNTFP26441 200 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 RPL10AP62906 217 aaKnown RBP16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 CRADDP78560 199 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 TRMT5Q32P41 509 aaKnown RBP16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 WDR75Q8IWA0 830 aaKnown RBP16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 NLRP7Q8WX94 980 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 CSPG4P5Q96PW8 444 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 KCTD15Q96SI1 283 aaPredicted RBP16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 PTPN18Q99952 460 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 VCXQ9H320 206 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 PIDD1Q9HB75 910 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 MTMR10Q9NXD2 777 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 MFHAS1Q9Y4C4 1052 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 NME7Q9Y5B8 376 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 SDR42E2A6NKP2 422 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 PPEF2O14830 753 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 ITM2AO43736 263 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 GNAT1P11488 350 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 SP100P23497 879 aaPredicted RBP16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 SNX16P57768 344 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 KBTBD2Q8IY47 623 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 C7orf31Q8N865 590 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 CXCL16Q9H2A7 254 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 DTLQ9NZJ0 730 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 SLC7A8Q9UHI5 535 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 DNAJC16Q9Y2G8 782 aa16.26■□□□□ 0.19
TSPAN4-211ENST00000468468 TSPAN1O60635 241 aa16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 TOMM70O94826 608 aa16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 NPTXRO95502 500 aa16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 GSRP00390 522 aa16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 ANPEPP15144 967 aa16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 PTPN9P43378 593 aa16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 N4BP2L1Q5TBK1 243 aaPredicted RBP16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 OR6B3Q8NGW1 331 aa16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 MORF4L1Q9UBU8 362 aa16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 RBM47A0AV96 593 aaKnown RBP16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 H3BRB1 525 aa16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 STRNO43815 780 aa16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 SMPD1P17405 629 aa16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 C1orf146Q5VVC0 180 aa16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 MBLAC2Q68D91 279 aa16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 NCBP2-AS2Q69YL0 99 aa16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 CYS1Q717R9 158 aa16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 MARK2Q7KZI7 788 aaKnown RBP16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 NT5DC4Q86YG4 428 aa16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 ZDHHC17Q8IUH5 632 aa16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 CCDC185Q8N715 623 aa16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 LINC01465Q8N7H1 131 aa16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 PIWIL2Q8TC59 973 aaKnown RBP16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 TFB1MQ8WVM0 346 aaKnown RBP16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 HTR3CQ8WXA8 447 aa16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 MAML3Q96JK9 1138 aa16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 ZNF184Q99676 751 aaPredicted RBP16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 TUT1Q9H6E5 874 aaKnown RBP16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 PIH1D1Q9NWS0 290 aaKnown RBP16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 SCOCQ9UIL1 159 aa16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 EMCNQ9ULC0 261 aa16.25■□□□□ 0.19
TSPAN4-211ENST00000468468 TPP1O14773 563 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 ADCY6O43306 1168 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 ALDOAP04075 364 aaKnown RBP16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 FESP07332 822 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 C6orf222P0C671 652 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 LCP1P13796 627 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 VAV1P15498 845 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms