RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 PRDM16Q9HAZ2 1276 aa19.83■□□□□ 0.77
COL7A1-207ENST00000467985 ACP6Q9NPH0 428 aa19.83■□□□□ 0.77
COL7A1-207ENST00000467985 CYTH4Q9UIA0 394 aa19.83■□□□□ 0.77
COL7A1-207ENST00000467985 PLA2G4CQ9UP65 541 aa19.83■□□□□ 0.77
COL7A1-207ENST00000467985 TNRC6BQ9UPQ9 1833 aaKnown RBP19.82■□□□□ 0.76
COL7A1-207ENST00000467985 GLI1P08151 1106 aa19.82■□□□□ 0.76
COL7A1-207ENST00000467985 HLA-FP30511 346 aa19.82■□□□□ 0.76
COL7A1-207ENST00000467985 BPIFB4P59827 614 aa19.82■□□□□ 0.76
COL7A1-207ENST00000467985 APBA1Q02410 837 aa19.82■□□□□ 0.76
COL7A1-207ENST00000467985 LMAN2Q12907 356 aa19.82■□□□□ 0.76
COL7A1-207ENST00000467985 TMEM215Q68D42 235 aa19.82■□□□□ 0.76
COL7A1-207ENST00000467985 RFWD3Q6PCD5 774 aa19.82■□□□□ 0.76
COL7A1-207ENST00000467985 KIAA1324Q6UXG2 1013 aaKnown RBP19.82■□□□□ 0.76
COL7A1-207ENST00000467985 SERPINA13PQ6UXR4 307 aa19.82■□□□□ 0.76
COL7A1-207ENST00000467985 KIAA0907Q7Z7F0 614 aaPredicted RBP19.82■□□□□ 0.76
COL7A1-207ENST00000467985 CEP76Q8TAP6 659 aa19.82■□□□□ 0.76
COL7A1-207ENST00000467985 SLC39A13Q96H72 371 aa19.82■□□□□ 0.76
COL7A1-207ENST00000467985 NUSAP1Q9BXS6 441 aaKnown RBP19.82■□□□□ 0.76
COL7A1-207ENST00000467985 SIX2Q9NPC8 291 aa19.82■□□□□ 0.76
COL7A1-207ENST00000467985 ABCB8Q9NUT2 735 aa19.82■□□□□ 0.76
COL7A1-207ENST00000467985 GGA2Q9UJY4 613 aa19.82■□□□□ 0.76
COL7A1-207ENST00000467985 DNAJC12Q9UKB3 198 aa19.82■□□□□ 0.76
COL7A1-207ENST00000467985 CYP8B1Q9UNU6 501 aa19.82■□□□□ 0.76
COL7A1-207ENST00000467985 TM4SF5O14894 197 aa19.81■□□□□ 0.76
COL7A1-207ENST00000467985 TBL1XO60907 577 aa19.81■□□□□ 0.76
COL7A1-207ENST00000467985 NDUFS2O75306 463 aa19.81■□□□□ 0.76
COL7A1-207ENST00000467985 APOEP02649 317 aa19.81■□□□□ 0.76
COL7A1-207ENST00000467985 ATP5BP06576 529 aaKnown RBP19.81■□□□□ 0.76
COL7A1-207ENST00000467985 PABPC1P11940 636 aaKnown RBP19.81■□□□□ 0.76
COL7A1-207ENST00000467985 EEF1GP26641 437 aaKnown RBP19.81■□□□□ 0.76
COL7A1-207ENST00000467985 KRT9P35527 623 aa19.81■□□□□ 0.76
COL7A1-207ENST00000467985 EFHC1Q5JVL4 640 aa19.81■□□□□ 0.76
COL7A1-207ENST00000467985 MIIPQ5JXC2 388 aa19.81■□□□□ 0.76
COL7A1-207ENST00000467985 PEAR1Q5VY43 1037 aaPredicted RBP19.81■□□□□ 0.76
COL7A1-207ENST00000467985 ARMCX6Q7L4S7 300 aa19.81■□□□□ 0.76
COL7A1-207ENST00000467985 TAC4Q86UU9 113 aa19.81■□□□□ 0.76
COL7A1-207ENST00000467985 CCDC117Q8IWD4 279 aaPredicted RBP19.81■□□□□ 0.76
COL7A1-207ENST00000467985 ERLEC1Q96DZ1 483 aa19.81■□□□□ 0.76
COL7A1-207ENST00000467985 PPP1R13BQ96KQ4 1090 aa19.81■□□□□ 0.76
COL7A1-207ENST00000467985 TMEM9BQ9NQ34 198 aa19.81■□□□□ 0.76
COL7A1-207ENST00000467985 ASNSD1Q9NWL6 643 aa19.81■□□□□ 0.76
COL7A1-207ENST00000467985 PILRBQ9UKJ0 227 aa19.81■□□□□ 0.76
COL7A1-207ENST00000467985 CEP83Q9Y592 693 aa19.81■□□□□ 0.76
COL7A1-207ENST00000467985 CEP295Q9C0D2 2601 aa19.81■□□□□ 0.76
COL7A1-207ENST00000467985 GON4LQ3T8J9 2241 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 GOLGA6L7A0A1B0GV03 622 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 KCNJ18B7U540 433 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 FOXN3O00409 490 aaPredicted RBP19.8■□□□□ 0.76
COL7A1-207ENST00000467985 PES1O00541 588 aaKnown RBP19.8■□□□□ 0.76
COL7A1-207ENST00000467985 EPHX1P07099 455 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 SLC2A3P11169 496 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 OXTRP30559 389 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 SLC6A4P31645 630 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 SGSHP51688 502 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 ZNF33AQ06730 810 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 KCNJ12Q14500 433 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 FNDC3BQ53EP0 1204 aaKnown RBP19.8■□□□□ 0.76
COL7A1-207ENST00000467985 TRIM61Q5EBN2 209 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 DAB2IPQ5VWQ8 1189 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 SYPL2Q5VXT5 272 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 NADSYN1Q6IA69 706 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 CHST9Q7L1S5 443 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 MFN1Q8IWA4 741 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 FAM71AQ8IYT1 594 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 ADAM32Q8TC27 787 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 SORCS1Q8WY21 1168 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 FOXJ1Q92949 421 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 SIPA1Q96FS4 1042 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 CPXM1Q96SM3 734 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 LSM14BQ9BX40 385 aaKnown RBP19.8■□□□□ 0.76
COL7A1-207ENST00000467985 USP36Q9P275 1121 aaKnown RBP19.8■□□□□ 0.76
COL7A1-207ENST00000467985 SLC12A6Q9UHW9 1150 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 CEP192Q8TEP8 1941 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 CKAP5Q14008 2032 aa19.8■□□□□ 0.76
COL7A1-207ENST00000467985 CHD8Q9HCK8 2581 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 PATE3B3GLJ2 98 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 HSF2BPO75031 334 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 TRUB2O95900 331 aaKnown RBP19.79■□□□□ 0.76
COL7A1-207ENST00000467985 IGLV3-25P01717 112 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 DLDP09622 509 aaKnown RBP19.79■□□□□ 0.76
COL7A1-207ENST00000467985 ACADMP11310 421 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 POLR2EP19388 210 aaKnown RBP19.79■□□□□ 0.76
COL7A1-207ENST00000467985 ITPKAP23677 461 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 PRKCHP24723 683 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 CD6P30203 668 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 CLCN1P35523 988 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 IRX4P78413 519 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 CDK17Q00537 523 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 NFKBIBQ15653 356 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 DUOXA1Q1HG43 343 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 TCP11X2Q5H9J9 407 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 SYCP2LQ5T4T6 812 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 MBLAC2Q68D91 279 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 SLC23A3Q6PIS1 610 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 ADIPOR2Q86V24 386 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 TMPRSS6Q8IU80 811 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 WDTC1Q8N5D0 677 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 FIBINQ8TAL6 211 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 PRCCQ92733 491 aaPredicted RBP19.79■□□□□ 0.76
COL7A1-207ENST00000467985 BTN2A3PQ96KV6 586 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms