RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 MSI1O43347 362 aaKnown RBP18■□□□□ 0.47
TRIM56-203ENST00000467847 LATS1O95835 1130 aa18■□□□□ 0.47
TRIM56-203ENST00000467847 SETSIPP0DME0 302 aa18■□□□□ 0.47
TRIM56-203ENST00000467847 LCP1P13796 627 aa18■□□□□ 0.47
TRIM56-203ENST00000467847 TBXAS1P24557 533 aaPredicted RBP18■□□□□ 0.47
TRIM56-203ENST00000467847 PMS1P54277 932 aaKnown RBP18■□□□□ 0.47
TRIM56-203ENST00000467847 CAMK2GQ13555 558 aaPredicted RBP18■□□□□ 0.47
TRIM56-203ENST00000467847 COBLL1Q53SF7 1204 aa18■□□□□ 0.47
TRIM56-203ENST00000467847 ADGRF1Q5T601 910 aa18■□□□□ 0.47
TRIM56-203ENST00000467847 CHST9Q7L1S5 443 aa18■□□□□ 0.47
TRIM56-203ENST00000467847 ZC3H3Q8IXZ2 948 aaKnown RBP18■□□□□ 0.47
TRIM56-203ENST00000467847 WFIKKN2Q8TEU8 576 aa18■□□□□ 0.47
TRIM56-203ENST00000467847 CYB5D2Q8WUJ1 264 aa18■□□□□ 0.47
TRIM56-203ENST00000467847 KCTD13Q8WZ19 329 aa18■□□□□ 0.47
TRIM56-203ENST00000467847 GSDMAQ96QA5 445 aa18■□□□□ 0.47
TRIM56-203ENST00000467847 CNGB3Q9NQW8 809 aa18■□□□□ 0.47
TRIM56-203ENST00000467847 ABCB8Q9NUT2 735 aa18■□□□□ 0.47
TRIM56-203ENST00000467847 ARMCX3Q9UH62 379 aaPredicted RBP18■□□□□ 0.47
TRIM56-203ENST00000467847 EIF2B4Q9UI10 523 aaKnown RBP18■□□□□ 0.47
TRIM56-203ENST00000467847 STOML2Q9UJZ1 356 aa18■□□□□ 0.47
TRIM56-203ENST00000467847 KIAA1257Q9ULG3 409 aa18■□□□□ 0.47
TRIM56-203ENST00000467847 FAM221BA6H8Z2 402 aa17.99■□□□□ 0.47
TRIM56-203ENST00000467847 TAF4O00268 1085 aa17.99■□□□□ 0.47
TRIM56-203ENST00000467847 CER1O95813 267 aa17.99■□□□□ 0.47
TRIM56-203ENST00000467847 FTH1P19P0C7X4 201 aa17.99■□□□□ 0.47
TRIM56-203ENST00000467847 FMR1NBQ8N0W7 255 aaPredicted RBP17.99■□□□□ 0.47
TRIM56-203ENST00000467847 AHI1Q8N157 1196 aa17.99■□□□□ 0.47
TRIM56-203ENST00000467847 UBR7Q8N806 425 aa17.99■□□□□ 0.47
TRIM56-203ENST00000467847 SETD7Q8WTS6 366 aaKnown RBP17.99■□□□□ 0.47
TRIM56-203ENST00000467847 SNX19Q92543 992 aa17.99■□□□□ 0.47
TRIM56-203ENST00000467847 SLC35C1Q96A29 364 aa17.99■□□□□ 0.47
TRIM56-203ENST00000467847 PCED1AQ9H1Q7 454 aa17.99■□□□□ 0.47
TRIM56-203ENST00000467847 LHX5Q9H2C1 402 aa17.99■□□□□ 0.47
TRIM56-203ENST00000467847 TMEM245Q9H330 911 aa17.99■□□□□ 0.47
TRIM56-203ENST00000467847 GAREM1Q9H706 876 aa17.99■□□□□ 0.47
TRIM56-203ENST00000467847 IL21RQ9HBE5 538 aa17.99■□□□□ 0.47
TRIM56-203ENST00000467847 GGA2Q9UJY4 613 aa17.99■□□□□ 0.47
TRIM56-203ENST00000467847 TRIM49BA6NDI0 452 aa17.98■□□□□ 0.47
TRIM56-203ENST00000467847 SMC2O95347 1197 aa17.98■□□□□ 0.47
TRIM56-203ENST00000467847 MATKP42679 507 aa17.98■□□□□ 0.47
TRIM56-203ENST00000467847 RGS7P49802 495 aa17.98■□□□□ 0.47
TRIM56-203ENST00000467847 DAOAP59103 153 aa17.98■□□□□ 0.47
TRIM56-203ENST00000467847 LRRC63Q05C16 580 aa17.98■□□□□ 0.47
TRIM56-203ENST00000467847 PKDCCQ504Y2 493 aa17.98■□□□□ 0.47
TRIM56-203ENST00000467847 TMEM270Q6UE05 265 aa17.98■□□□□ 0.47
TRIM56-203ENST00000467847 IL27RAQ6UWB1 636 aa17.98■□□□□ 0.47
TRIM56-203ENST00000467847 LCLAT1Q6UWP7 414 aa17.98■□□□□ 0.47
TRIM56-203ENST00000467847 ADIPOR2Q86V24 386 aa17.98■□□□□ 0.47
TRIM56-203ENST00000467847 SCML4Q8N228 414 aa17.98■□□□□ 0.47
TRIM56-203ENST00000467847 ZNF366Q8N895 744 aa17.98■□□□□ 0.47
TRIM56-203ENST00000467847 PNPLA1Q8N8W4 532 aa17.98■□□□□ 0.47
TRIM56-203ENST00000467847 TFAP2BQ92481 460 aa17.98■□□□□ 0.47
TRIM56-203ENST00000467847 COL26A1Q96A83 441 aa17.98■□□□□ 0.47
TRIM56-203ENST00000467847 PCOLCE2Q9UKZ9 415 aa17.98■□□□□ 0.47
TRIM56-203ENST00000467847 CABIN1Q9Y6J0 2220 aa17.98■□□□□ 0.47
TRIM56-203ENST00000467847 GOLGA6L4A6NEF3 574 aa17.97■□□□□ 0.47
TRIM56-203ENST00000467847 PIK3R2O00459 728 aa17.97■□□□□ 0.47
TRIM56-203ENST00000467847 CBFA2T3O75081 653 aa17.97■□□□□ 0.47
TRIM56-203ENST00000467847 PAEPP09466 180 aa17.97■□□□□ 0.47
TRIM56-203ENST00000467847 ZNF883P0CG24 379 aa17.97■□□□□ 0.47
TRIM56-203ENST00000467847 PABPC1P11940 636 aaKnown RBP17.97■□□□□ 0.47
TRIM56-203ENST00000467847 SGSHP51688 502 aa17.97■□□□□ 0.47
TRIM56-203ENST00000467847 BNC1Q01954 994 aa17.97■□□□□ 0.47
TRIM56-203ENST00000467847 PTPRNQ16849 979 aa17.97■□□□□ 0.47
TRIM56-203ENST00000467847 HLA-BQ31612 363 aa17.97■□□□□ 0.47
TRIM56-203ENST00000467847 MSANTD2Q6P1R3 559 aa17.97■□□□□ 0.47
TRIM56-203ENST00000467847 RFWD3Q6PCD5 774 aa17.97■□□□□ 0.47
TRIM56-203ENST00000467847 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.97■□□□□ 0.47
TRIM56-203ENST00000467847 C1orf216Q8TAB5 229 aa17.97■□□□□ 0.47
TRIM56-203ENST00000467847 ADAMTS14Q8WXS8 1223 aa17.97■□□□□ 0.47
TRIM56-203ENST00000467847 ERCC4Q92889 916 aaPredicted RBP17.97■□□□□ 0.47
TRIM56-203ENST00000467847 SMARCE1Q969G3 411 aa17.97■□□□□ 0.47
TRIM56-203ENST00000467847 C6orf106Q9H6K1 298 aaPredicted RBP17.97■□□□□ 0.47
TRIM56-203ENST00000467847 FBRSQ9HAH7 460 aa17.97■□□□□ 0.47
TRIM56-203ENST00000467847 TM7SF3Q9NS93 570 aa17.97■□□□□ 0.47
TRIM56-203ENST00000467847 APOBEC2Q9Y235 224 aaKnown RBP17.97■□□□□ 0.47
TRIM56-203ENST00000467847 FNDC3AQ9Y2H6 1198 aaKnown RBP17.97■□□□□ 0.47
TRIM56-203ENST00000467847 PCDHB4Q9Y5E5 795 aa17.97■□□□□ 0.47
TRIM56-203ENST00000467847 A0A1B0GVT2 93 aa17.96■□□□□ 0.47
TRIM56-203ENST00000467847 TBL1XO60907 577 aa17.96■□□□□ 0.47
TRIM56-203ENST00000467847 IGLV3-27P01718 113 aa17.96■□□□□ 0.47
TRIM56-203ENST00000467847 ATP5BP06576 529 aaKnown RBP17.96■□□□□ 0.47
TRIM56-203ENST00000467847 DLDP09622 509 aaKnown RBP17.96■□□□□ 0.47
TRIM56-203ENST00000467847 POLR2EP19388 210 aaKnown RBP17.96■□□□□ 0.47
TRIM56-203ENST00000467847 ACSL1P33121 698 aa17.96■□□□□ 0.47
TRIM56-203ENST00000467847 SLC11A2P49281 568 aa17.96■□□□□ 0.47
TRIM56-203ENST00000467847 FMO5P49326 533 aa17.96■□□□□ 0.47
TRIM56-203ENST00000467847 CSNK1EP49674 416 aaKnown RBP17.96■□□□□ 0.47
TRIM56-203ENST00000467847 AFF3P51826 1226 aaKnown RBP17.96■□□□□ 0.47
TRIM56-203ENST00000467847 NUGGCQ68CJ6 796 aa17.96■□□□□ 0.47
TRIM56-203ENST00000467847 MBLAC2Q68D91 279 aa17.96■□□□□ 0.47
TRIM56-203ENST00000467847 PMF1Q6P1K2 205 aa17.96■□□□□ 0.47
TRIM56-203ENST00000467847 C19orf48Q6RUI8 117 aa17.96■□□□□ 0.47
TRIM56-203ENST00000467847 KIAA0907Q7Z7F0 614 aaPredicted RBP17.96■□□□□ 0.47
TRIM56-203ENST00000467847 UNC45BQ8IWX7 931 aa17.96■□□□□ 0.47
TRIM56-203ENST00000467847 SLC35F5Q8WV83 523 aa17.96■□□□□ 0.47
TRIM56-203ENST00000467847 IRGQQ8WZA9 623 aa17.96■□□□□ 0.47
TRIM56-203ENST00000467847 GOLGA1Q92805 767 aa17.96■□□□□ 0.47
TRIM56-203ENST00000467847 NT5C1BQ96P26 610 aa17.96■□□□□ 0.47
TRIM56-203ENST00000467847 GTPBP4Q9BZE4 634 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms