RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 KIF11P52732 1056 aa16.47■□□□□ 0.23
TSSC4-208ENST00000467308 COPB1P53618 953 aaKnown RBP16.47■□□□□ 0.23
TSSC4-208ENST00000467308 UBASH3AP57075 661 aa16.47■□□□□ 0.23
TSSC4-208ENST00000467308 INCA1Q0VD86 236 aa16.47■□□□□ 0.23
TSSC4-208ENST00000467308 MAN2A1Q16706 1144 aa16.47■□□□□ 0.23
TSSC4-208ENST00000467308 FYB2Q5VWT5 728 aa16.47■□□□□ 0.23
TSSC4-208ENST00000467308 INTS8Q75QN2 995 aaKnown RBP16.47■□□□□ 0.23
TSSC4-208ENST00000467308 CCDC186Q7Z3E2 898 aa16.47■□□□□ 0.23
TSSC4-208ENST00000467308 SLCO6A1Q86UG4 719 aa16.47■□□□□ 0.23
TSSC4-208ENST00000467308 TMPRSS6Q8IU80 811 aa16.47■□□□□ 0.23
TSSC4-208ENST00000467308 FAM186BQ8IYM0 893 aa16.47■□□□□ 0.23
TSSC4-208ENST00000467308 ZCCHC9Q8N567 271 aaKnown RBP16.47■□□□□ 0.23
TSSC4-208ENST00000467308 EEF2KMTQ96G04 330 aa16.47■□□□□ 0.23
TSSC4-208ENST00000467308 P2RY11Q96G91 374 aa16.47■□□□□ 0.23
TSSC4-208ENST00000467308 TRIM5Q9C035 493 aa16.47■□□□□ 0.23
TSSC4-208ENST00000467308 PCED1AQ9H1Q7 454 aa16.47■□□□□ 0.23
TSSC4-208ENST00000467308 GAREM1Q9H706 876 aa16.47■□□□□ 0.23
TSSC4-208ENST00000467308 RTN4Q9NQC3 1192 aaKnown RBP16.47■□□□□ 0.23
TSSC4-208ENST00000467308 CLIC5Q9NZA1 410 aa16.47■□□□□ 0.23
TSSC4-208ENST00000467308 NUDT5Q9UKK9 219 aa16.47■□□□□ 0.23
TSSC4-208ENST00000467308 PCDHGB2Q9Y5G2 931 aa16.47■□□□□ 0.23
TSSC4-208ENST00000467308 LGALS16A8MUM7 142 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 SYNCRIPO60506 623 aaKnown RBP16.46■□□□□ 0.23
TSSC4-208ENST00000467308 ADCY5O95622 1261 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 KLKB1P03952 638 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 RALAP11233 206 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 MATKP42679 507 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 MTIF2P46199 727 aaKnown RBP16.46■□□□□ 0.23
TSSC4-208ENST00000467308 DLG4P78352 724 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 COG7P83436 770 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 NR1I3Q14994 352 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 EIF4HQ15056 248 aaKnown RBP16.46■□□□□ 0.23
TSSC4-208ENST00000467308 GEN1Q17RS7 908 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 CCDC40Q4G0X9 1142 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 FILIP1LQ4L180 1135 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 HSP90AA4PQ58FG1 418 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 MIIPQ5JXC2 388 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 DCAF12L1Q5VU92 463 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 CEP135Q66GS9 1140 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 C19orf48Q6RUI8 117 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 DBX2Q6ZNG2 339 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 SV2AQ7L0J3 742 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 PDZD3Q86UT5 571 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 BAHD1Q8TBE0 780 aaPredicted RBP16.46■□□□□ 0.23
TSSC4-208ENST00000467308 TMC2Q8TDI7 906 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 SETD7Q8WTS6 366 aaKnown RBP16.46■□□□□ 0.23
TSSC4-208ENST00000467308 PRCCQ92733 491 aaPredicted RBP16.46■□□□□ 0.23
TSSC4-208ENST00000467308 CYFIP2Q96F07 1278 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 SIPA1Q96FS4 1042 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 CDC6Q99741 560 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 NUP58Q9BVL2 599 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 DCLK3Q9C098 648 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 MIR1-1HGQ9H1L0 117 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 TM7SF3Q9NS93 570 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 IFNKQ9P0W0 207 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 DKK4Q9UBT3 224 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 NAGPAQ9UK23 515 aa16.46■□□□□ 0.23
TSSC4-208ENST00000467308 GOLGA4Q13439 2230 aaKnown RBP16.46■□□□□ 0.23
TSSC4-208ENST00000467308 URB1O60287 2271 aaKnown RBP16.45■□□□□ 0.22
TSSC4-208ENST00000467308 CILPO75339 1184 aa16.45■□□□□ 0.22
TSSC4-208ENST00000467308 DKK1O94907 266 aa16.45■□□□□ 0.22
TSSC4-208ENST00000467308 COL28A1Q2UY09 1125 aa16.45■□□□□ 0.22
TSSC4-208ENST00000467308 HLA-BQ31612 363 aa16.45■□□□□ 0.22
TSSC4-208ENST00000467308 SOWAHCQ53LP3 525 aaPredicted RBP16.45■□□□□ 0.22
TSSC4-208ENST00000467308 TMPRSS7Q7RTY8 843 aa16.45■□□□□ 0.22
TSSC4-208ENST00000467308 ANKS1BQ7Z6G8 1248 aa16.45■□□□□ 0.22
TSSC4-208ENST00000467308 SCD5Q86SK9 330 aa16.45■□□□□ 0.22
TSSC4-208ENST00000467308 C1orf216Q8TAB5 229 aa16.45■□□□□ 0.22
TSSC4-208ENST00000467308 JAKMIP2Q96AA8 810 aa16.45■□□□□ 0.22
TSSC4-208ENST00000467308 PIWIL1Q96J94 861 aaKnown RBP16.45■□□□□ 0.22
TSSC4-208ENST00000467308 NAP1L5Q96NT1 182 aaPredicted RBP16.45■□□□□ 0.22
TSSC4-208ENST00000467308 TWNKQ96RR1 684 aa16.45■□□□□ 0.22
TSSC4-208ENST00000467308 NT5C1AQ9BXI3 368 aa16.45■□□□□ 0.22
TSSC4-208ENST00000467308 XPO4Q9C0E2 1151 aaKnown RBP16.45■□□□□ 0.22
TSSC4-208ENST00000467308 CYP3A43Q9HB55 503 aa16.45■□□□□ 0.22
TSSC4-208ENST00000467308 IL21RQ9HBE5 538 aa16.45■□□□□ 0.22
TSSC4-208ENST00000467308 ELOVL2Q9NXB9 296 aa16.45■□□□□ 0.22
TSSC4-208ENST00000467308 FNDC3AQ9Y2H6 1198 aaKnown RBP16.45■□□□□ 0.22
TSSC4-208ENST00000467308 USP3Q9Y6I4 520 aa16.45■□□□□ 0.22
TSSC4-208ENST00000467308 PMM2O15305 246 aa16.44■□□□□ 0.22
TSSC4-208ENST00000467308 FLRT2O43155 660 aa16.44■□□□□ 0.22
TSSC4-208ENST00000467308 TIMM44O43615 452 aa16.44■□□□□ 0.22
TSSC4-208ENST00000467308 ACADMP11310 421 aa16.44■□□□□ 0.22
TSSC4-208ENST00000467308 KRT13P13646 458 aa16.44■□□□□ 0.22
TSSC4-208ENST00000467308 PIK3CAP42336 1068 aa16.44■□□□□ 0.22
TSSC4-208ENST00000467308 COPAP53621 1224 aa16.44■□□□□ 0.22
TSSC4-208ENST00000467308 BNC1Q01954 994 aa16.44■□□□□ 0.22
TSSC4-208ENST00000467308 ZNF234Q14588 700 aa16.44■□□□□ 0.22
TSSC4-208ENST00000467308 VWA3BQ502W6 1294 aa16.44■□□□□ 0.22
TSSC4-208ENST00000467308 SPOPLQ6IQ16 392 aa16.44■□□□□ 0.22
TSSC4-208ENST00000467308 CPXM2Q8N436 756 aa16.44■□□□□ 0.22
TSSC4-208ENST00000467308 RBBP8NLQ8NC74 664 aaPredicted RBP16.44■□□□□ 0.22
TSSC4-208ENST00000467308 MDM1Q8TC05 714 aa16.44■□□□□ 0.22
TSSC4-208ENST00000467308 SLC35C1Q96A29 364 aa16.44■□□□□ 0.22
TSSC4-208ENST00000467308 PDLIM2Q96JY6 352 aa16.44■□□□□ 0.22
TSSC4-208ENST00000467308 SLC2A11Q9BYW1 496 aa16.44■□□□□ 0.22
TSSC4-208ENST00000467308 IMPG2Q9BZV3 1241 aa16.44■□□□□ 0.22
TSSC4-208ENST00000467308 DNAI2Q9GZS0 605 aa16.44■□□□□ 0.22
TSSC4-208ENST00000467308 NDST4Q9H3R1 872 aa16.44■□□□□ 0.22
TSSC4-208ENST00000467308 SCUBE2Q9NQ36 999 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms