RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 CFAP161Q6P656 301 aa4.57□□□□□ -1.68
VPS13A-209ENST00000467124 KCNV1Q6PIU1 500 aa4.57□□□□□ -1.68
VPS13A-209ENST00000467124 NAPRTQ6XQN6 538 aa4.57□□□□□ -1.68
VPS13A-209ENST00000467124 PTCHD4Q6ZW05 846 aa4.57□□□□□ -1.68
VPS13A-209ENST00000467124 R3HCC1LQ7Z5L2 792 aaKnown RBP4.57□□□□□ -1.68
VPS13A-209ENST00000467124 TDRD7Q8NHU6 1098 aaKnown RBP4.57□□□□□ -1.68
VPS13A-209ENST00000467124 PROKR1Q8TCW9 393 aa4.57□□□□□ -1.68
VPS13A-209ENST00000467124 APOPT1Q96IL0 206 aa4.57□□□□□ -1.68
VPS13A-209ENST00000467124 FAR2Q96K12 515 aa4.57□□□□□ -1.68
VPS13A-209ENST00000467124 MACROD1Q9BQ69 325 aa4.57□□□□□ -1.68
VPS13A-209ENST00000467124 CTDSP1Q9GZU7 261 aa4.57□□□□□ -1.68
VPS13A-209ENST00000467124 PDE11AQ9HCR9 933 aa4.57□□□□□ -1.68
VPS13A-209ENST00000467124 KRT84Q9NSB2 600 aa4.57□□□□□ -1.68
VPS13A-209ENST00000467124 CYP46A1Q9Y6A2 500 aa4.57□□□□□ -1.68
VPS13A-209ENST00000467124 LINC00473A8K010 186 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 EGR2P11161 476 aaPredicted RBP4.56□□□□□ -1.68
VPS13A-209ENST00000467124 PRKCHP24723 683 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 PLA2G5P39877 138 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 PAFAH1B1P43034 410 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 HARS2P49590 506 aaKnown RBP4.56□□□□□ -1.68
VPS13A-209ENST00000467124 CCR9P51686 369 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 TAP1Q03518 808 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 CDK18Q07002 472 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 CCDC15Q0P6D6 951 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 LMAN2Q12907 356 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 GAB1Q13480 694 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 DNASE1L3Q13609 305 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 TUBA3CQ13748 450 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 BMPR2Q13873 1038 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 TBRG1Q3YBR2 411 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 CBWD5Q5RIA9 395 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 KAZNQ674X7 775 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 ANO7Q6IWH7 933 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 TUBA3EQ6PEY2 450 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 KYAT3Q6YP21 454 aaKnown RBP4.56□□□□□ -1.68
VPS13A-209ENST00000467124 C4orf50Q6ZRC1 276 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 H1FNTQ75WM6 255 aaPredicted RBP4.56□□□□□ -1.68
VPS13A-209ENST00000467124 PEG10Q86TG7 708 aaKnown RBP4.56□□□□□ -1.68
VPS13A-209ENST00000467124 CNTROBQ8N137 903 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 VPS52Q8N1B4 723 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.56□□□□□ -1.68
VPS13A-209ENST00000467124 RUFY2Q8WXA3 655 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 OVCA2Q8WZ82 227 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 CENPIQ92674 756 aaPredicted RBP4.56□□□□□ -1.68
VPS13A-209ENST00000467124 PBKQ96KB5 322 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 COQ10AQ96MF6 247 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 SDF4Q9BRK5 362 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 HDHD5Q9BXW7 423 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 KRTAP4-5Q9BYR2 181 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 SERHL2Q9H4I8 314 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 CDCP1Q9H5V8 836 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 RXFP3Q9NSD7 469 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 DLL3Q9NYJ7 618 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 AMFRQ9UKV5 643 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 NAALADL1Q9UQQ1 740 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 KAT6BQ8WYB5 2073 aa4.56□□□□□ -1.68
VPS13A-209ENST00000467124 ITIH6Q6UXX5 1313 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 SALL3Q9BXA9 1300 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 PIPSLA2A3N6 862 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 WDR27A2RRH5 827 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 MBD3L5A6NJ08 208 aaPredicted RBP4.55□□□□□ -1.68
VPS13A-209ENST00000467124 H0YIZ8 118 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 ZNF213O14771 459 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 TNPO2O14787 897 aaKnown RBP4.55□□□□□ -1.68
VPS13A-209ENST00000467124 SYN3O14994 580 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 MPPED1O15442 326 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 SEPT4O43236 478 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 DHX16O60231 1041 aaKnown RBP4.55□□□□□ -1.68
VPS13A-209ENST00000467124 TSPAN3O60637 253 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 EXOC3O60645 756 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 MBPP02686 304 aaPredicted RBP4.55□□□□□ -1.68
VPS13A-209ENST00000467124 ELFN1P0C7U0 828 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 NDUFB7P17568 137 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 TGM1P22735 817 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 MMP8P22894 467 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 AVPR2P30518 371 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 AVPR1BP47901 424 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 PCP4P48539 62 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 MCM2P49736 904 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 AGTR2P50052 363 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 JAK3P52333 1124 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 EIF5P55010 431 aaKnown RBP4.55□□□□□ -1.68
VPS13A-209ENST00000467124 DCAF7P61962 342 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 GPC5P78333 572 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 SHC2P98077 582 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 PTPRRQ15256 657 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 AWAT1Q58HT5 328 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 RUNDC3AQ59EK9 446 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 SH2D4BQ5SQS7 431 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 MZT2BQ6NZ67 158 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 WDR93Q6P2C0 686 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 MTHFD1LQ6UB35 978 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 DSTYKQ6XUX3 929 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 PARS2Q7L3T8 475 aaKnown RBP4.55□□□□□ -1.68
VPS13A-209ENST00000467124 RNF144BQ7Z419 303 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 TSPYL6Q8N831 410 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 PNPLA1Q8N8W4 532 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 SLC2A12Q8TD20 617 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 KIF1BPQ96EK5 621 aa4.55□□□□□ -1.68
VPS13A-209ENST00000467124 RNFT2Q96EX2 444 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 396.3 ms