RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 MXD4Q14582 209 aaPredicted RBP18.6■□□□□ 0.57
SNAPC3-205ENST00000467062 INAQ16352 499 aa18.6■□□□□ 0.57
SNAPC3-205ENST00000467062 TFDP3Q5H9I0 405 aa18.6■□□□□ 0.57
SNAPC3-205ENST00000467062 MPZL3Q6UWV2 235 aa18.6■□□□□ 0.57
SNAPC3-205ENST00000467062 PRPF39Q86UA1 669 aaKnown RBP18.6■□□□□ 0.57
SNAPC3-205ENST00000467062 UBA3Q8TBC4 463 aa18.6■□□□□ 0.57
SNAPC3-205ENST00000467062 MAD1L1Q9Y6D9 718 aa18.6■□□□□ 0.57
SNAPC3-205ENST00000467062 FAM237BA0A1B0GVD1 139 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 FUOMA2VDF0 154 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 ADCY6O43306 1168 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 CCNT2O60583 730 aaKnown RBP18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 CST8O60676 142 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 LRCH4O75427 683 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 ATP5BP06576 529 aaKnown RBP18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 PPARGP37231 505 aaPredicted RBP18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 CDK9P50750 372 aaKnown RBP18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 ZNF200P98182 395 aaPredicted RBP18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 C1orf127Q8N9H9 656 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 ACTL9Q8TC94 416 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 LRRN4Q8WUT4 740 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 CDT1Q9H211 546 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 PTPRHQ9HD43 1115 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 TRIM17Q9Y577 477 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 DNALI1O14645 258 aaPredicted RBP18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 DNAJA2O60884 412 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 GRAP2O75791 330 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 TNNC2P02585 160 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 NEK2P51955 445 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 OTUD4Q01804 1114 aaKnown RBP18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 TGFBIQ15582 683 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 MDH1BQ5I0G3 518 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 OGFRL1Q5TC84 451 aaPredicted RBP18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 ANKRD22Q5VYY1 191 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 GPC2Q8N158 579 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 BANPQ8N9N5 519 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 HSPH1Q92598 858 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 ANKRD36BP1Q96IX9 119 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 PRPF18Q99633 342 aaKnown RBP18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 CGREF1Q99674 301 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 WWP1Q9H0M0 922 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 ALG13Q9NP73 1137 aaKnown RBP18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 SLC17A7Q9P2U7 560 aa18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 GPC6Q9Y625 555 aaPredicted RBP18.59■□□□□ 0.57
SNAPC3-205ENST00000467062 LACTBL1A8MY62 500 aa18.58■□□□□ 0.57
SNAPC3-205ENST00000467062 ACKR2O00590 384 aa18.58■□□□□ 0.57
SNAPC3-205ENST00000467062 ITM2AO43736 263 aa18.58■□□□□ 0.57
SNAPC3-205ENST00000467062 VTNP04004 478 aa18.58■□□□□ 0.57
SNAPC3-205ENST00000467062 ERBB2P04626 1255 aa18.58■□□□□ 0.57
SNAPC3-205ENST00000467062 PDGFRBP09619 1106 aa18.58■□□□□ 0.57
SNAPC3-205ENST00000467062 ZNF12P17014 697 aa18.58■□□□□ 0.57
SNAPC3-205ENST00000467062 NFKBIAP25963 317 aa18.58■□□□□ 0.57
SNAPC3-205ENST00000467062 PPP1R10Q96QC0 940 aaKnown RBP18.58■□□□□ 0.57
SNAPC3-205ENST00000467062 HAUS8Q9BT25 410 aa18.58■□□□□ 0.57
SNAPC3-205ENST00000467062 FETUBQ9UGM5 382 aa18.58■□□□□ 0.57
SNAPC3-205ENST00000467062 INPP5FQ9Y2H2 1132 aa18.58■□□□□ 0.57
SNAPC3-205ENST00000467062 DCAF8L1A6NGE4 600 aa18.58■□□□□ 0.56
SNAPC3-205ENST00000467062 CAPN8A6NHC0 703 aa18.58■□□□□ 0.56
SNAPC3-205ENST00000467062 FAM58BPP0C7Q3 252 aa18.58■□□□□ 0.56
SNAPC3-205ENST00000467062 SRGAP2BP0DMP2 458 aa18.58■□□□□ 0.56
SNAPC3-205ENST00000467062 PHKA2P46019 1235 aa18.58■□□□□ 0.56
SNAPC3-205ENST00000467062 PDIA2Q13087 525 aaKnown RBP18.58■□□□□ 0.56
SNAPC3-205ENST00000467062 CCNIQ14094 377 aa18.58■□□□□ 0.56
SNAPC3-205ENST00000467062 EFTUD2Q15029 972 aaKnown RBP eCLIP18.58■□□□□ 0.562e-6■■■■□ 23.1
SNAPC3-205ENST00000467062 OASLQ15646 514 aaKnown RBP18.58■□□□□ 0.56
SNAPC3-205ENST00000467062 CNGA3Q16281 694 aa18.58■□□□□ 0.56
SNAPC3-205ENST00000467062 EFHC2Q5JST6 749 aa18.58■□□□□ 0.56
SNAPC3-205ENST00000467062 JADE1Q6IE81 842 aa18.58■□□□□ 0.56
SNAPC3-205ENST00000467062 SULF1Q8IWU6 871 aa18.58■□□□□ 0.56
SNAPC3-205ENST00000467062 ZMAT2Q96NC0 199 aaKnown RBP18.58■□□□□ 0.56
SNAPC3-205ENST00000467062 LTBP3Q9NS15 1303 aa18.58■□□□□ 0.56
SNAPC3-205ENST00000467062 A0A087WZ62 844 aa18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 IGKV6-21A0A0C4DH24 114 aa18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 TCRBV7S3A2A0A539 114 aa18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 C3orf70A6NLC5 250 aaPredicted RBP18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 MAP3K6O95382 1288 aa18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 RAG1P15918 1043 aa18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 ALDH1A3P47895 512 aa18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 ENTPD1P49961 510 aa18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 BCAP31P51572 246 aa18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 PIGHQ14442 188 aaPredicted RBP18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 MSS51Q4VC12 460 aa18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 RABGAP1LQ5R372 815 aa18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 DCUN1D1Q96GG9 259 aa18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 PIWIL1Q96J94 861 aaKnown RBP18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 FDXACB1Q9BRP7 624 aaPredicted RBP18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 CXCL16Q9H2A7 254 aa18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 FZD8Q9H461 694 aa18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 NRDE2Q9H7Z3 1164 aa18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 RPF1Q9H9Y2 349 aaKnown RBP18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 ADAM23O75077 832 aa18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 LSM8O95777 96 aaKnown RBP18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 PROZP22891 400 aa18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 SSTR1P30872 391 aa18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 MYBPC1Q00872 1141 aa18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 MBTD1Q05BQ5 628 aa18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 MMRN1Q13201 1228 aa18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 ZNF667Q5HYK9 610 aa18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 CCDC106Q9BWC9 280 aa18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 CALN1Q9BXU9 219 aa18.57■□□□□ 0.56
SNAPC3-205ENST00000467062 TRPC7Q9HCX4 862 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms