RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 RHBDF2Q6PJF5 856 aa16.57■□□□□ 0.24
GPC1-207ENST00000466624 SLFN11Q7Z7L1 901 aa16.57■□□□□ 0.24
GPC1-207ENST00000466624 PSTKQ8IV42 348 aaKnown RBP16.57■□□□□ 0.24
GPC1-207ENST00000466624 MSANTD3Q96H12 275 aa16.57■□□□□ 0.24
GPC1-207ENST00000466624 PRMT1Q99873 361 aaKnown RBP16.57■□□□□ 0.24
GPC1-207ENST00000466624 OSBPL2Q9H1P3 480 aa16.57■□□□□ 0.24
GPC1-207ENST00000466624 XPO7Q9UIA9 1087 aaKnown RBP16.57■□□□□ 0.24
GPC1-207ENST00000466624 HOXC11O43248 304 aaPredicted RBP16.56■□□□□ 0.24
GPC1-207ENST00000466624 KRT86O43790 486 aa16.56■□□□□ 0.24
GPC1-207ENST00000466624 PRPSAP2O60256 369 aa16.56■□□□□ 0.24
GPC1-207ENST00000466624 TACR2P21452 398 aa16.56■□□□□ 0.24
GPC1-207ENST00000466624 MIPP30301 263 aa16.56■□□□□ 0.24
GPC1-207ENST00000466624 SLC6A4P31645 630 aa16.56■□□□□ 0.24
GPC1-207ENST00000466624 GAD2Q05329 585 aa16.56■□□□□ 0.24
GPC1-207ENST00000466624 TNK2Q07912 1038 aa16.56■□□□□ 0.24
GPC1-207ENST00000466624 MESDQ14696 234 aa16.56■□□□□ 0.24
GPC1-207ENST00000466624 MPPE1Q53F39 396 aa16.56■□□□□ 0.24
GPC1-207ENST00000466624 LY6G5CQ5SRR4 150 aa16.56■□□□□ 0.24
GPC1-207ENST00000466624 MPP7Q5T2T1 576 aa16.56■□□□□ 0.24
GPC1-207ENST00000466624 PIK3R6Q5UE93 754 aa16.56■□□□□ 0.24
GPC1-207ENST00000466624 C11orf63Q6NUN7 778 aa16.56■□□□□ 0.24
GPC1-207ENST00000466624 SCYL2Q6P3W7 929 aa16.56■□□□□ 0.24
GPC1-207ENST00000466624 RNF10Q8N5U6 811 aaKnown RBP16.56■□□□□ 0.24
GPC1-207ENST00000466624 CCDC185Q8N715 623 aa16.56■□□□□ 0.24
GPC1-207ENST00000466624 C8orf33Q9H7E9 229 aaPredicted RBP16.56■□□□□ 0.24
GPC1-207ENST00000466624 ANLNQ9NQW6 1124 aa16.56■□□□□ 0.24
GPC1-207ENST00000466624 GTSE1Q9NYZ3 720 aa16.56■□□□□ 0.24
GPC1-207ENST00000466624 WNT16Q9UBV4 365 aa16.56■□□□□ 0.24
GPC1-207ENST00000466624 MUTYHQ9UIF7 546 aa16.56■□□□□ 0.24
GPC1-207ENST00000466624 SALL4Q9UJQ4 1053 aa16.56■□□□□ 0.24
GPC1-207ENST00000466624 FZD10Q9ULW2 581 aa16.56■□□□□ 0.24
GPC1-207ENST00000466624 USP18Q9UMW8 372 aa16.56■□□□□ 0.24
GPC1-207ENST00000466624 HS3ST4Q9Y661 456 aa16.56■□□□□ 0.24
GPC1-207ENST00000466624 MIA3Q5JRA6 1907 aa16.56■□□□□ 0.24
GPC1-207ENST00000466624 F5H5T6 163 aa16.55■□□□□ 0.24
GPC1-207ENST00000466624 PENKP01210 267 aaPredicted RBP16.55■□□□□ 0.24
GPC1-207ENST00000466624 CYBBP04839 570 aa16.55■□□□□ 0.24
GPC1-207ENST00000466624 ADH5P11766 374 aa16.55■□□□□ 0.24
GPC1-207ENST00000466624 AMPD2Q01433 879 aa16.55■□□□□ 0.24
GPC1-207ENST00000466624 SLC25A11Q02978 314 aaKnown RBP16.55■□□□□ 0.24
GPC1-207ENST00000466624 HADHQ16836 314 aaKnown RBP16.55■□□□□ 0.24
GPC1-207ENST00000466624 C5orf22Q49AR2 442 aa16.55■□□□□ 0.24
GPC1-207ENST00000466624 BOLA3Q53S33 107 aa16.55■□□□□ 0.24
GPC1-207ENST00000466624 EFHC2Q5JST6 749 aa16.55■□□□□ 0.24
GPC1-207ENST00000466624 ERMARDQ5T6L9 678 aa16.55■□□□□ 0.24
GPC1-207ENST00000466624 TTC39BQ5VTQ0 682 aaPredicted RBP16.55■□□□□ 0.24
GPC1-207ENST00000466624 RAP1GAP2Q684P5 730 aa16.55■□□□□ 0.24
GPC1-207ENST00000466624 RNF43Q68DV7 783 aa16.55■□□□□ 0.24
GPC1-207ENST00000466624 C1orf228Q6PIY5 440 aa16.55■□□□□ 0.24
GPC1-207ENST00000466624 CYP4V2Q6ZWL3 525 aaPredicted RBP16.55■□□□□ 0.24
GPC1-207ENST00000466624 CHSY1Q86X52 802 aa16.55■□□□□ 0.24
GPC1-207ENST00000466624 TMEM25Q86YD3 366 aa16.55■□□□□ 0.24
GPC1-207ENST00000466624 TPCN2Q8NHX9 752 aa16.55■□□□□ 0.24
GPC1-207ENST00000466624 TEKT4Q8WW24 435 aa16.55■□□□□ 0.24
GPC1-207ENST00000466624 ZNF830Q96NB3 372 aaPredicted RBP16.55■□□□□ 0.24
GPC1-207ENST00000466624 PEBP4Q96S96 227 aa16.55■□□□□ 0.24
GPC1-207ENST00000466624 PPP2R2CQ9Y2T4 447 aa16.55■□□□□ 0.24
GPC1-207ENST00000466624 DUSP10Q9Y6W6 482 aa16.55■□□□□ 0.24
GPC1-207ENST00000466624 GOLGA6L7A0A1B0GV03 622 aa16.54■□□□□ 0.24
GPC1-207ENST00000466624 TYW5A2RUC4 315 aaKnown RBP16.54■□□□□ 0.24
GPC1-207ENST00000466624 OTOL1A6NHN0 477 aaPredicted RBP16.54■□□□□ 0.24
GPC1-207ENST00000466624 BUB1BO60566 1050 aaPredicted RBP16.54■□□□□ 0.24
GPC1-207ENST00000466624 GJA4P35212 333 aa16.54■□□□□ 0.24
GPC1-207ENST00000466624 EIF2DP41214 584 aaKnown RBP16.54■□□□□ 0.24
GPC1-207ENST00000466624 ZNF135P52742 658 aaPredicted RBP16.54■□□□□ 0.24
GPC1-207ENST00000466624 ZXDAP98168 799 aa16.54■□□□□ 0.24
GPC1-207ENST00000466624 AUHQ13825 339 aaKnown RBP16.54■□□□□ 0.24
GPC1-207ENST00000466624 RABGAP1LQ5R372 815 aa16.54■□□□□ 0.24
GPC1-207ENST00000466624 FYB2Q5VWT5 728 aa16.54■□□□□ 0.24
GPC1-207ENST00000466624 POLNQ7Z5Q5 900 aa16.54■□□□□ 0.24
GPC1-207ENST00000466624 RALGPS2Q86X27 583 aaPredicted RBP16.54■□□□□ 0.24
GPC1-207ENST00000466624 HJURPQ8NCD3 748 aaPredicted RBP16.54■□□□□ 0.24
GPC1-207ENST00000466624 TMA16Q96EY4 203 aaKnown RBP16.54■□□□□ 0.24
GPC1-207ENST00000466624 PRICKLE1Q96MT3 831 aaPredicted RBP16.54■□□□□ 0.24
GPC1-207ENST00000466624 BBS2Q9BXC9 721 aa16.54■□□□□ 0.24
GPC1-207ENST00000466624 RETREG1Q9H6L5 497 aa16.54■□□□□ 0.24
GPC1-207ENST00000466624 TMPRSS4Q9NRS4 437 aa16.54■□□□□ 0.24
GPC1-207ENST00000466624 PCSK1NQ9UHG2 260 aa16.54■□□□□ 0.24
GPC1-207ENST00000466624 AP4E1Q9UPM8 1137 aa16.54■□□□□ 0.24
GPC1-207ENST00000466624 IGLV3-10A0A075B6K4 115 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 A0A0U1RQJ8 604 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 ZSCAN12O43309 604 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 DCXO43602 365 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 BUB1O43683 1085 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 CACNG3O60359 315 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 IL1R2P27930 398 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 L1CAMP32004 1257 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 HTR7P34969 479 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 VCPP55072 806 aaKnown RBP16.53■□□□□ 0.24
GPC1-207ENST00000466624 PRKCQQ04759 706 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 SEMA3BQ13214 749 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 GAB4Q2WGN9 574 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 SLC44A4Q53GD3 710 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 MANEALQ5VSG8 457 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 LRRC38Q5VT99 294 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 DAB2IPQ5VWQ8 1189 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 FBXL22Q6P050 247 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 RFWD3Q6PCD5 774 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 LRRC31Q6UY01 552 aa16.53■□□□□ 0.24
GPC1-207ENST00000466624 TPGS1Q6ZTW0 290 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms