RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 AMFRQ9UKV5 643 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 AP4E1Q9UPM8 1137 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 PCDHA3Q9Y5H8 950 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 SNX10Q9Y5X0 201 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 HS3ST4Q9Y661 456 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 NUP205Q92621 2012 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 TCF20Q9UGU0 1960 aaKnown RBP11.54□□□□□ -0.56
VCP-204ENST00000466100 CCDC66A2RUB6 948 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 C3orf70A6NLC5 250 aaPredicted RBP11.54□□□□□ -0.56
VCP-204ENST00000466100 HEPACAM2A8MVW5 462 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 MIF4GDA9UHW6 222 aaKnown RBP11.54□□□□□ -0.56
VCP-204ENST00000466100 FAM72CH0Y354 149 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 SCAMP3O14828 347 aaKnown RBP11.54□□□□□ -0.56
VCP-204ENST00000466100 ACSL4O60488 711 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 KRT7P08729 469 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 IL9P15248 144 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 SLC6A4P31645 630 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 GGCXP38435 758 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 HARS2P49590 506 aaKnown RBP11.54□□□□□ -0.56
VCP-204ENST00000466100 MLLT6P55198 1093 aaPredicted RBP11.54□□□□□ -0.56
VCP-204ENST00000466100 GNG11P61952 73 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 ETF1P62495 437 aaKnown RBP11.54□□□□□ -0.56
VCP-204ENST00000466100 FCHO2Q0JRZ9 810 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 MTA1Q13330 715 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 TAZQ16635 292 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 HADHQ16836 314 aaKnown RBP11.54□□□□□ -0.56
VCP-204ENST00000466100 C5orf22Q49AR2 442 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 BOLA3Q53S33 107 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 MS4A13Q5J8X5 152 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 FAM72AQ5TYM5 149 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 DCAF12L1Q5VU92 463 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 FAM72DQ6L9T8 149 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 PARM1Q6UWI2 310 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 VITQ6UXI7 678 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 C14orf80Q86SX3 495 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 FAM72BQ86X60 149 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 DENND1CQ8IV53 801 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 BBS7Q8IWZ6 715 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 KATNAL2Q8IYT4 538 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 PYROXD2Q8N2H3 581 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 ATP6V0D2Q8N8Y2 350 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 TSC1Q92574 1164 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 RNF34Q969K3 372 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 ELSPBP1Q96BH3 223 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 MYEOVQ96EZ4 313 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 ASIC4Q96FT7 647 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 P2RY11Q96G91 374 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 C1orf74Q96LT6 269 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 KCTD15Q96SI1 283 aaPredicted RBP11.54□□□□□ -0.56
VCP-204ENST00000466100 PLA2G2FQ9BZM2 168 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.54□□□□□ -0.56
VCP-204ENST00000466100 KLHL11Q9NVR0 708 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 THEGQ9P2T0 379 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 LSM7Q9UK45 103 aaKnown RBP11.54□□□□□ -0.56
VCP-204ENST00000466100 JRKLQ9Y4A0 524 aa11.54□□□□□ -0.56
VCP-204ENST00000466100 IGLV3-10A0A075B6K4 115 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 GOLGA6L7A0A1B0GV03 622 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 ECI2O75521 394 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 ATP1A1P05023 1023 aaKnown RBP11.53□□□□□ -0.56
VCP-204ENST00000466100 CD48P09326 243 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 TACR2P21452 398 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 SP100P23497 879 aaPredicted RBP11.53□□□□□ -0.56
VCP-204ENST00000466100 HOXC13P31276 330 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 L1CAMP32004 1257 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 GJC1P36383 396 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 SSR1P43307 286 aaKnown RBP11.53□□□□□ -0.56
VCP-204ENST00000466100 SLC11A2P49281 568 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 AUHQ13825 339 aaKnown RBP11.53□□□□□ -0.56
VCP-204ENST00000466100 ARL13BQ3SXY8 428 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 EFHC2Q5JST6 749 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 ADGRF1Q5T601 910 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 RAP1GAP2Q684P5 730 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 RNF43Q68DV7 783 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 MTSS1LQ765P7 747 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 ANKS1BQ7Z6G8 1248 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 MFSD6LQ8IWD5 586 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 ZDHHC14Q8IZN3 488 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 CPXM2Q8N436 756 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 TDRD5Q8NAT2 981 aaKnown RBP11.53□□□□□ -0.56
VCP-204ENST00000466100 ST13P5Q8NFI4 369 aaPredicted RBP11.53□□□□□ -0.56
VCP-204ENST00000466100 BPIFB1Q8TDL5 484 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 RAPGEF5Q92565 580 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 HSPH1Q92598 858 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 E2F7Q96AV8 911 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 FAF2Q96CS3 445 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 PRICKLE1Q96MT3 831 aaPredicted RBP11.53□□□□□ -0.56
VCP-204ENST00000466100 RPP25Q9BUL9 199 aaKnown RBP11.53□□□□□ -0.56
VCP-204ENST00000466100 PCDH18Q9HCL0 1135 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 ZFP14Q9HCL3 533 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 DDX56Q9NY93 547 aaKnown RBP11.53□□□□□ -0.56
VCP-204ENST00000466100 ZNF510Q9Y2H8 683 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 SH3BP1Q9Y3L3 701 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 NR2E1Q9Y466 385 aa11.53□□□□□ -0.56
VCP-204ENST00000466100 NYNRINQ9P2P1 1898 aaKnown RBP11.53□□□□□ -0.56
VCP-204ENST00000466100 F5P12259 2224 aa11.52□□□□□ -0.56
VCP-204ENST00000466100 ZNF487B1APH4 448 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 LOC730098B7Z3J9 87 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 ENC1O14682 589 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 LRIG2O94898 1065 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 KRT1P04264 644 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms