RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 MTAPQ13126 283 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 GAS6Q14393 721 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 PPP2R5DQ14738 602 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 ARID5BQ14865 1188 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 CDO1Q16878 200 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 C15orf59Q2T9L4 293 aaPredicted RBP12.84□□□□□ -0.35
CHPF2-202ENST00000465601 MPPE1Q53F39 396 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 RAB6CQ53S08 254 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 SH3PXD2AQ5TCZ1 1133 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 PIK3R6Q5UE93 754 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 RAP1GAP2Q684P5 730 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 GRAMD4Q6IC98 578 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 DCUN1D2Q6PH85 259 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 SND1Q7KZF4 910 aaKnown RBP eCLIP12.84□□□□□ -0.35
CHPF2-202ENST00000465601 PHTF2Q8N3S3 785 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 MYEOVQ96EZ4 313 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 PGAP3Q96FM1 320 aaPredicted RBP12.84□□□□□ -0.35
CHPF2-202ENST00000465601 MRFAP1L1Q96HT8 127 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 BTN2A3PQ96KV6 586 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 CHP1Q99653 195 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 DDX50Q9BQ39 737 aaKnown RBP12.84□□□□□ -0.35
CHPF2-202ENST00000465601 RAB6CQ9H0N0 254 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 ISCUQ9H1K1 167 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 CHRDQ9H2X0 955 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 WDCPQ9H6R7 721 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 ABHD10Q9NUJ1 306 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 SPATA6Q9NWH7 488 aaPredicted RBP12.84□□□□□ -0.35
CHPF2-202ENST00000465601 TBC1D3BA6NDS4 549 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 K7EQS6 105 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 GALR2O43603 387 aaPredicted RBP12.83□□□□□ -0.36
CHPF2-202ENST00000465601 TBL1XO60907 577 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 RNF40O75150 1001 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 TACR2P21452 398 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 GPD1P21695 349 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 HOXD9P28356 352 aaPredicted RBP12.83□□□□□ -0.36
CHPF2-202ENST00000465601 RDXP35241 583 aaKnown RBP12.83□□□□□ -0.36
CHPF2-202ENST00000465601 GRIA2P42262 883 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 MAGEA9P43362 315 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 DGKGP49619 791 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 SEC13P55735 322 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 RPS24P62847 133 aaKnown RBP12.83□□□□□ -0.36
CHPF2-202ENST00000465601 MAMLD1Q13495 774 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 MS4A13Q5J8X5 152 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 PPP1R15BQ5SWA1 713 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 CCDC122Q5T0U0 273 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 EMC10Q5UCC4 262 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 PLEKHA7Q6IQ23 1121 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 BNIPLQ7Z465 357 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 CHSY1Q86X52 802 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 CNGA4Q8IV77 575 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 LGI2Q8N0V4 545 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 SYNPOQ8N3V7 929 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 ZNF653Q96CK0 615 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 MCEEQ96PE7 176 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 TKTL2Q9H0I9 626 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 ANLNQ9NQW6 1124 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 TMPRSS4Q9NRS4 437 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 ARHGEF38Q9NXL2 777 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 STIM2Q9P246 746 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 MYO1AQ9UBC5 1043 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 CNOT8Q9UFF9 292 aaKnown RBP12.83□□□□□ -0.36
CHPF2-202ENST00000465601 FBXO10Q9UK96 956 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 DOCK4Q8N1I0 1966 aa12.83□□□□□ -0.36
CHPF2-202ENST00000465601 A0A0A0MRY4 1105 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 ANKRD62A6NC57 917 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 I6L893 689 aaPredicted RBP12.82□□□□□ -0.36
CHPF2-202ENST00000465601 PAGE1O75459 146 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 ENDOD1O94919 500 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 COL9A1P20849 921 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 GGCXP38435 758 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 PTPN9P43378 593 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 NUBP1P53384 320 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 OGDHQ02218 1023 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 GFPT1Q06210 699 aaPredicted RBP12.82□□□□□ -0.36
CHPF2-202ENST00000465601 MAPK8IP2Q13387 824 aaPredicted RBP12.82□□□□□ -0.36
CHPF2-202ENST00000465601 FBXO43Q4G163 708 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 PREPLQ4J6C6 727 aaPredicted RBP12.82□□□□□ -0.36
CHPF2-202ENST00000465601 C2orf27AQ580R0 203 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 BRMS1LQ5PSV4 323 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 PKN3Q6P5Z2 889 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 ALKBH5Q6P6C2 394 aaKnown RBP12.82□□□□□ -0.36
CHPF2-202ENST00000465601 C14orf80Q86SX3 495 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 FAM131BQ86XD5 332 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 C1orf210Q8IVY1 113 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 CFAP52Q8N1V2 620 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 TC2NQ8N9U0 490 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 TERB1Q8NA31 727 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 PRSS33Q8NF86 280 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 FAM172AQ8WUF8 416 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 CENPIQ92674 756 aaPredicted RBP12.82□□□□□ -0.36
CHPF2-202ENST00000465601 PRICKLE1Q96MT3 831 aaPredicted RBP12.82□□□□□ -0.36
CHPF2-202ENST00000465601 PRMT1Q99873 361 aaKnown RBP12.82□□□□□ -0.36
CHPF2-202ENST00000465601 SIK2Q9H0K1 926 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 DEF6Q9H4E7 631 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 PARVAQ9NVD7 372 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 POLR3BQ9NW08 1133 aaPredicted RBP12.82□□□□□ -0.36
CHPF2-202ENST00000465601 C2orf42Q9NWW7 574 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 SNX10Q9Y5X0 201 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 HS3ST4Q9Y661 456 aa12.82□□□□□ -0.36
CHPF2-202ENST00000465601 GON4LQ3T8J9 2241 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms