RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 PXNP49023 591 aaPredicted RBP17.68■□□□□ 0.42
VPS52-215ENST00000464425 SGSHP51688 502 aa17.68■□□□□ 0.42
VPS52-215ENST00000464425 MRPS21P82921 87 aaKnown RBP17.68■□□□□ 0.42
VPS52-215ENST00000464425 FAM133BQ5BKY9 247 aaKnown RBP17.68■□□□□ 0.42
VPS52-215ENST00000464425 ALLCQ8N6M5 410 aa17.68■□□□□ 0.42
VPS52-215ENST00000464425 ATRIPQ8WXE1 791 aa17.68■□□□□ 0.42
VPS52-215ENST00000464425 ZSCAN32Q9NX65 697 aa17.68■□□□□ 0.42
VPS52-215ENST00000464425 FBXO10Q9UK96 956 aa17.68■□□□□ 0.42
VPS52-215ENST00000464425 PRRT4C9JH25 899 aa17.67■□□□□ 0.42
VPS52-215ENST00000464425 GFRA2O00451 464 aa17.67■□□□□ 0.42
VPS52-215ENST00000464425 PAPSS2O95340 614 aaPredicted RBP17.67■□□□□ 0.42
VPS52-215ENST00000464425 KLF8O95600 359 aaPredicted RBP17.67■□□□□ 0.42
VPS52-215ENST00000464425 SKILP12757 684 aa17.67■□□□□ 0.42
VPS52-215ENST00000464425 TFE3P19532 575 aaPredicted RBP17.67■□□□□ 0.42
VPS52-215ENST00000464425 TNFAIP3P21580 790 aa17.67■□□□□ 0.42
VPS52-215ENST00000464425 HOXD9P28356 352 aaPredicted RBP17.67■□□□□ 0.42
VPS52-215ENST00000464425 KIR2DL1P43626 348 aaPredicted RBP17.67■□□□□ 0.42
VPS52-215ENST00000464425 FNTBP49356 437 aa17.67■□□□□ 0.42
VPS52-215ENST00000464425 NRLP54845 237 aa17.67■□□□□ 0.42
VPS52-215ENST00000464425 EIF4EBP2Q13542 120 aaPredicted RBP17.67■□□□□ 0.42
VPS52-215ENST00000464425 DMC1Q14565 340 aa17.67■□□□□ 0.42
VPS52-215ENST00000464425 PIK3R6Q5UE93 754 aa17.67■□□□□ 0.42
VPS52-215ENST00000464425 WDR59Q6PJI9 974 aa17.67■□□□□ 0.42
VPS52-215ENST00000464425 SYT13Q7L8C5 426 aa17.67■□□□□ 0.42
VPS52-215ENST00000464425 ZNF571Q7Z3V5 609 aaPredicted RBP17.67■□□□□ 0.42
VPS52-215ENST00000464425 TC2NQ8N9U0 490 aa17.67■□□□□ 0.42
VPS52-215ENST00000464425 TXNDC5Q8NBS9 432 aaKnown RBP17.67■□□□□ 0.42
VPS52-215ENST00000464425 NELL1Q92832 810 aa17.67■□□□□ 0.42
VPS52-215ENST00000464425 ACDQ96AP0 544 aa17.67■□□□□ 0.42
VPS52-215ENST00000464425 MYEOVQ96EZ4 313 aa17.67■□□□□ 0.42
VPS52-215ENST00000464425 HHIPQ96QV1 700 aa17.67■□□□□ 0.42
VPS52-215ENST00000464425 DDX50Q9BQ39 737 aaKnown RBP17.67■□□□□ 0.42
VPS52-215ENST00000464425 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.67■□□□□ 0.42
VPS52-215ENST00000464425 ADAM22Q9P0K1 906 aa17.67■□□□□ 0.42
VPS52-215ENST00000464425 CALCOCO1Q9P1Z2 691 aa17.67■□□□□ 0.42
VPS52-215ENST00000464425 STIM2Q9P246 746 aa17.67■□□□□ 0.42
VPS52-215ENST00000464425 TBL1XO60907 577 aa17.66■□□□□ 0.42
VPS52-215ENST00000464425 CHRM1P11229 460 aaPredicted RBP17.66■□□□□ 0.42
VPS52-215ENST00000464425 CCR1P32246 355 aa17.66■□□□□ 0.42
VPS52-215ENST00000464425 FLT3P36888 993 aa17.66■□□□□ 0.42
VPS52-215ENST00000464425 SCNN1AP37088 669 aa17.66■□□□□ 0.42
VPS52-215ENST00000464425 SULT1E1P49888 294 aa17.66■□□□□ 0.42
VPS52-215ENST00000464425 CENPCQ03188 943 aa17.66■□□□□ 0.42
VPS52-215ENST00000464425 GEN1Q17RS7 908 aa17.66■□□□□ 0.42
VPS52-215ENST00000464425 RAP1GAP2Q684P5 730 aa17.66■□□□□ 0.42
VPS52-215ENST00000464425 PPP1R2P3Q6NXS1 205 aa17.66■□□□□ 0.42
VPS52-215ENST00000464425 ZC3H14Q6PJT7 736 aaKnown RBP17.66■□□□□ 0.42
VPS52-215ENST00000464425 VPS36Q86VN1 386 aa17.66■□□□□ 0.42
VPS52-215ENST00000464425 IL17RCQ8NAC3 791 aa17.66■□□□□ 0.42
VPS52-215ENST00000464425 OLIG1Q8TAK6 271 aa17.66■□□□□ 0.42
VPS52-215ENST00000464425 BTN2A3PQ96KV6 586 aa17.66■□□□□ 0.42
VPS52-215ENST00000464425 PANX2Q96RD6 677 aa17.66■□□□□ 0.42
VPS52-215ENST00000464425 TBCBQ99426 244 aa17.66■□□□□ 0.42
VPS52-215ENST00000464425 NPY6RQ99463 290 aa17.66■□□□□ 0.42
VPS52-215ENST00000464425 FAM126AQ9BYI3 521 aaPredicted RBP17.66■□□□□ 0.42
VPS52-215ENST00000464425 ADAM33Q9BZ11 813 aa17.66■□□□□ 0.42
VPS52-215ENST00000464425 METTL5Q9NRN9 209 aaKnown RBP17.66■□□□□ 0.42
VPS52-215ENST00000464425 SLC12A6Q9UHW9 1150 aa17.66■□□□□ 0.42
VPS52-215ENST00000464425 TMEM59LQ9UK28 342 aa17.66■□□□□ 0.42
VPS52-215ENST00000464425 HCN2Q9UL51 889 aa17.66■□□□□ 0.42
VPS52-215ENST00000464425 STAP1Q9ULZ2 295 aa17.66■□□□□ 0.42
VPS52-215ENST00000464425 PCDHGA2Q9Y5H1 932 aa17.66■□□□□ 0.42
VPS52-215ENST00000464425 VPS13AQ96RL7 3174 aa17.66■□□□□ 0.42
VPS52-215ENST00000464425 KCNU1A8MYU2 1149 aa17.65■□□□□ 0.42
VPS52-215ENST00000464425 SGK1O00141 431 aa17.65■□□□□ 0.42
VPS52-215ENST00000464425 GJB6O95452 261 aa17.65■□□□□ 0.42
VPS52-215ENST00000464425 SLC2A3P11169 496 aa17.65■□□□□ 0.42
VPS52-215ENST00000464425 GZMAP12544 262 aa17.65■□□□□ 0.42
VPS52-215ENST00000464425 ABCB4P21439 1286 aa17.65■□□□□ 0.42
VPS52-215ENST00000464425 WASP42768 502 aa17.65■□□□□ 0.42
VPS52-215ENST00000464425 RPS24P62847 133 aaKnown RBP17.65■□□□□ 0.42
VPS52-215ENST00000464425 PTP4A2Q12974 167 aa17.65■□□□□ 0.42
VPS52-215ENST00000464425 MS4A13Q5J8X5 152 aa17.65■□□□□ 0.42
VPS52-215ENST00000464425 OTUD1Q5VV17 481 aaPredicted RBP17.65■□□□□ 0.42
VPS52-215ENST00000464425 EGFLAMQ63HQ2 1017 aa17.65■□□□□ 0.42
VPS52-215ENST00000464425 TRNP1Q6NT89 227 aa17.65■□□□□ 0.42
VPS52-215ENST00000464425 ALYREFQ86V81 257 aaKnown RBP17.65■□□□□ 0.42
VPS52-215ENST00000464425 CHSY1Q86X52 802 aa17.65■□□□□ 0.42
VPS52-215ENST00000464425 PHF13Q86YI8 300 aaPredicted RBP17.65■□□□□ 0.42
VPS52-215ENST00000464425 LGI2Q8N0V4 545 aa17.65■□□□□ 0.42
VPS52-215ENST00000464425 CFAP52Q8N1V2 620 aa17.65■□□□□ 0.42
VPS52-215ENST00000464425 EMC1Q8N766 993 aa17.65■□□□□ 0.42
VPS52-215ENST00000464425 ZNF513Q8N8E2 541 aaPredicted RBP17.65■□□□□ 0.42
VPS52-215ENST00000464425 ATP6V0D2Q8N8Y2 350 aa17.65■□□□□ 0.42
VPS52-215ENST00000464425 ZBTB44Q8NCP5 570 aa17.65■□□□□ 0.42
VPS52-215ENST00000464425 NKD2Q969F2 451 aaPredicted RBP17.65■□□□□ 0.42
VPS52-215ENST00000464425 PRICKLE1Q96MT3 831 aaPredicted RBP17.65■□□□□ 0.42
VPS52-215ENST00000464425 SLC2A11Q9BYW1 496 aa17.65■□□□□ 0.42
VPS52-215ENST00000464425 PIGVQ9NUD9 493 aa17.65■□□□□ 0.42
VPS52-215ENST00000464425 RRN3Q9NYV6 651 aa17.65■□□□□ 0.42
VPS52-215ENST00000464425 ARHGAP20Q9P2F6 1191 aa17.65■□□□□ 0.42
VPS52-215ENST00000464425 MMP17Q9ULZ9 603 aa17.65■□□□□ 0.42
VPS52-215ENST00000464425 SLC27A6Q9Y2P4 619 aa17.65■□□□□ 0.42
VPS52-215ENST00000464425 STARD13Q9Y3M8 1113 aa17.65■□□□□ 0.42
VPS52-215ENST00000464425 MYO18AQ92614 2054 aaKnown RBP17.65■□□□□ 0.42
VPS52-215ENST00000464425 MYO15AQ9UKN7 3530 aa17.64■□□□□ 0.42
VPS52-215ENST00000464425 SSU72P8A0A1W2PR75 194 aa17.64■□□□□ 0.41
VPS52-215ENST00000464425 TMCO5BA8MYB1 307 aa17.64■□□□□ 0.41
VPS52-215ENST00000464425 GOLGA6L6A8MZA4 724 aa17.64■□□□□ 0.41
VPS52-215ENST00000464425 ADAM23O75077 832 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms