RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 EIF3DO15371 548 aaKnown RBP eCLIP7.95□□□□□ -1.14
UBE4B-204ENST00000462658 XPOTO43592 962 aaKnown RBP7.95□□□□□ -1.14
UBE4B-204ENST00000462658 PPFIA4O75335 1185 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 ALDH1A2O94788 518 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 FGFR1OPO95684 399 aaKnown RBP7.95□□□□□ -1.14
UBE4B-204ENST00000462658 PTMAP06454 111 aaKnown RBP7.95□□□□□ -1.14
UBE4B-204ENST00000462658 RBP3P10745 1247 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 MARK3P27448 753 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 KIR2DL3P43628 341 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 SLC26A2P50443 739 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 CASP5P51878 434 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 POLGP54098 1239 aaPredicted RBP7.95□□□□□ -1.14
UBE4B-204ENST00000462658 KCNJ12Q14500 433 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 PLCB4Q15147 1175 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 KNOP1Q1ED39 458 aaKnown RBP7.95□□□□□ -1.14
UBE4B-204ENST00000462658 BMT2Q1RMZ1 405 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 ZC2HC1CQ53FD0 456 aaPredicted RBP7.95□□□□□ -1.14
UBE4B-204ENST00000462658 TCP11X2Q5H9J9 407 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 FOXR2Q6PJQ5 311 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 CREBRFQ8IUR6 639 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 FAM114A1Q8IWE2 563 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 GPR135Q8IZ08 494 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 PPM1NQ8N819 430 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 SPC24Q8NBT2 197 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 MCPH1Q8NEM0 835 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 ANKRD20A12PQ8NF67 263 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 OR6J1Q8NGC5 347 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 ATP8B4Q8TF62 1192 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 AFG1LQ8WV93 481 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 JADE3Q92613 823 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 KIFAP3Q92845 792 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 NAP1L5Q96NT1 182 aaPredicted RBP7.95□□□□□ -1.14
UBE4B-204ENST00000462658 CTAGE1Q96RT6 745 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 FIZ1Q96SL8 496 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 SSBP3Q9BWW4 388 aaPredicted RBP7.95□□□□□ -1.14
UBE4B-204ENST00000462658 ATP6V0A4Q9HBG4 840 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 DMRT3Q9NQL9 472 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 TYW1Q9NV66 732 aaKnown RBP7.95□□□□□ -1.14
UBE4B-204ENST00000462658 LIMA1Q9UHB6 759 aaKnown RBP7.95□□□□□ -1.14
UBE4B-204ENST00000462658 GABRQQ9UN88 632 aa7.95□□□□□ -1.14
UBE4B-204ENST00000462658 GOLGA6L6A8MZA4 724 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 K7ENM7 598 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 PDXKO00764 312 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 GPR42O15529 346 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 CALUO43852 315 aaPredicted RBP7.94□□□□□ -1.14
UBE4B-204ENST00000462658 HBP1O60381 514 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 PRAMEF4O60810 478 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 LGALS2P05162 132 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 TPM3P06753 285 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 EEF1GP26641 437 aaKnown RBP7.94□□□□□ -1.14
UBE4B-204ENST00000462658 HOXD13P35453 343 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 FLT3LGP49771 235 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 PEX3P56589 373 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 FKBP3Q00688 224 aaKnown RBP7.94□□□□□ -1.14
UBE4B-204ENST00000462658 ALCAMQ13740 583 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 ODF1Q14990 250 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 EMC2Q15006 297 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 KRT31Q15323 416 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 ADRM1Q16186 407 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 FILIP1LQ4L180 1135 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 ZCWPW2Q504Y3 356 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 MFSD14CQ5VZR4 134 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 GLB1LQ6UWU2 654 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 TAS1R1Q7RTX1 841 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 APTXQ7Z2E3 356 aaKnown RBP7.94□□□□□ -1.14
UBE4B-204ENST00000462658 EXOC8Q8IYI6 725 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 GLB1L3Q8NCI6 653 aaPredicted RBP7.94□□□□□ -1.14
UBE4B-204ENST00000462658 SLC17A8Q8NDX2 589 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 TRIM44Q96DX7 344 aaPredicted RBP7.94□□□□□ -1.14
UBE4B-204ENST00000462658 EEF2KMTQ96G04 330 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 CEP89Q96ST8 783 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 NTPCRQ9BSD7 190 aaKnown RBP7.94□□□□□ -1.14
UBE4B-204ENST00000462658 STRA6Q9BX79 667 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 DHX33Q9H6R0 707 aaKnown RBP7.94□□□□□ -1.14
UBE4B-204ENST00000462658 C17orf75Q9HAS0 396 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 XPNPEP1Q9NQW7 623 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 ERAP1Q9NZ08 941 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 NCDNQ9UBB6 729 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 TRAF3IP3Q9Y228 551 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 UBE4BO95155 1302 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 KIAA0100Q14667 2235 aaKnown RBP7.94□□□□□ -1.14
UBE4B-204ENST00000462658 DOCK5Q9H7D0 1870 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 PLXNA1Q9UIW2 1896 aa7.94□□□□□ -1.14
UBE4B-204ENST00000462658 CCDC169A6NNP5 214 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 CETN3O15182 167 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 SLC16A4O15374 487 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 ADCY6O43306 1168 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 TPM2P07951 284 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 MMP3P08254 477 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 LTA4HP09960 611 aaKnown RBP7.93□□□□□ -1.14
UBE4B-204ENST00000462658 VSIG10L2P0DP72 767 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 HOXD10P28358 340 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 MTIF2P46199 727 aaKnown RBP7.93□□□□□ -1.14
UBE4B-204ENST00000462658 NPTX2P47972 431 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 COPB1P53618 953 aaKnown RBP7.93□□□□□ -1.14
UBE4B-204ENST00000462658 SOX10P56693 466 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 GTF2BQ00403 316 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 PRKCZQ05513 592 aa7.93□□□□□ -1.14
UBE4B-204ENST00000462658 DMP1Q13316 513 aaPredicted RBP7.93□□□□□ -1.14
UBE4B-204ENST00000462658 RIN1Q13671 783 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms