RNA–Protein interactions for RNA: ENST00000462641.1

EIF3D-209, Transcript of eukaryotic translation initiation factor 3 subunit D, human

TSL 2

Gene EIF3D, Length 887 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF3D-209	ENST00000462641	USP3	Q9Y6I4	520 aa		11.44	□□□□□ -0.58
EIF3D-209	ENST00000462641	TP53BP1	Q12888	1972 aa	Predicted RBP	11.44	□□□□□ -0.58
EIF3D-209	ENST00000462641	KNL1	Q8NG31	2342 aa		11.44	□□□□□ -0.58
EIF3D-209	ENST00000462641	NUMA1	Q14980	2115 aa		11.44	□□□□□ -0.58
EIF3D-209	ENST00000462641	FAM47DP	A6NHR8	397 aa		11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	PLK4	O00444	970 aa		11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	KCNK3	O14649	394 aa		11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	RRP8	O43159	456 aa	Known RBP	11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	RNASEH1	O60930	286 aa	Known RBP	11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	CDK4	P11802	303 aa		11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	POLR2E	P19388	210 aa	Known RBP	11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	HOXD9	P28356	352 aa	Predicted RBP	11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	GCLM	P48507	274 aa		11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	ST8SIA6	P61647	398 aa		11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	PDE4C	Q08493	712 aa		11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	CAMK2B	Q13554	666 aa		11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	PKP1	Q13835	747 aa		11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	PTPRN	Q16849	979 aa		11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	TMEM215	Q68D42	235 aa		11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	ZNF776	Q68DI1	518 aa	Predicted RBP	11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	INTS8	Q75QN2	995 aa	Known RBP	11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	FMNL3	Q8IVF7	1028 aa		11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	CCDC47	Q96A33	483 aa	Known RBP	11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	CRELD1	Q96HD1	420 aa		11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	IPO9	Q96P70	1041 aa	Known RBP	11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	ABCB8	Q9NUT2	735 aa		11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	SUN2	Q9UH99	717 aa		11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	GGA2	Q9UJY4	613 aa		11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	AK5	Q9Y6K8	562 aa		11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	SLCO1B1	Q9Y6L6	691 aa		11.43	□□□□□ -0.58
EIF3D-209	ENST00000462641	HELZ2	Q9BYK8	2649 aa	Known RBP	11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	TYW5	A2RUC4	315 aa	Known RBP	11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	ENC1	O14682	589 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	RFPL3	O75679	317 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	ZIC2	O95409	532 aa	Predicted RBP	11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	ZBED1	O96006	694 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	ITGAV	P06756	1048 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	TRIM49	P0CI25	452 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	TRIM49C	P0CI26	452 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	PABPC1	P11940	636 aa	Known RBP	11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	PDIA4	P13667	645 aa	Known RBP	11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	HLA-F	P30511	346 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	CTSK	P43235	329 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	TKTL1	P51854	596 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	RPS14	P62263	151 aa	Known RBP	11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	RACK1	P63244	317 aa	Known RBP	11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	SEMG2	Q02383	582 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	STK4	Q13043	487 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	PIGZ	Q86VD9	579 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	CCDC117	Q8IWD4	279 aa	Predicted RBP	11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	FAM217A	Q8IXS0	508 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	GRAMD1C	Q8IYS0	662 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	ZNF557	Q8N988	423 aa	Predicted RBP	11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	KIAA0895	Q8NCT3	520 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	TAS1R2	Q8TE23	839 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	TMEM174	Q8WUU8	243 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	SLC39A7	Q92504	469 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	BAP1	Q92560	729 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	TMA16	Q96EY4	203 aa	Known RBP	11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	CNDP2	Q96KP4	475 aa	Known RBP	11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	TMEM245	Q9H330	911 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	LRRC4	Q9HBW1	653 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	APOBEC3G	Q9HC16	384 aa	Known RBP	11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	PRSS16	Q9NQE7	514 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	AASDHPPT	Q9NRN7	309 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	SCML1	Q9UN30	329 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	ZDHHC9	Q9Y397	364 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	HBS1L	Q9Y450	684 aa	Known RBP	11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	PCDHGA1	Q9Y5H4	931 aa		11.42	□□□□□ -0.58
EIF3D-209	ENST00000462641	MUC22	E2RYF6	1773 aa	Predicted RBP	11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	SHROOM3	Q8TF72	1996 aa		11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641		A0A1B0GTQ1	180 aa		11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	LRRC72	A6NJI9	287 aa		11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	TK2	O00142	265 aa		11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	CAPN9	O14815	690 aa		11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	MAPK13	O15264	365 aa		11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	YKT6	O15498	198 aa		11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	PAPSS1	O43252	624 aa	Predicted RBP	11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	LDOC1	O95751	146 aa	Predicted RBP	11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	DLD	P09622	509 aa	Known RBP	11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	SLFN14	P0C7P3	912 aa		11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	ZSCAN22	P10073	491 aa	Predicted RBP	11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	NR2F2	P24468	414 aa		11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	ARRB1	P49407	418 aa	Predicted RBP	11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	TRIP4	Q15650	581 aa	Predicted RBP	11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	KMT5B	Q4FZB7	885 aa		11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	MBLAC2	Q68D91	279 aa		11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	KIAA0895L	Q68EN5	471 aa		11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	GATAD2A	Q86YP4	633 aa		11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	FAM186B	Q8IYM0	893 aa		11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	SIX6OS1	Q8N1H7	587 aa		11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	RBBP8NL	Q8NC74	664 aa	Predicted RBP	11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	ADAM32	Q8TC27	787 aa		11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	TMEM176A	Q96HP8	235 aa		11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	ELF4	Q99607	663 aa	Predicted RBP	11.41	□□□□□ -0.58
EIF3D-209	ENST00000462641	ULBP1	Q9BZM6	244 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms