RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 SCYL2Q6P3W7 929 aa12.22□□□□□ -0.45
CPNE1-221ENST00000462352 RFWD3Q6PCD5 774 aa12.22□□□□□ -0.45
CPNE1-221ENST00000462352 TRIM67Q6ZTA4 783 aa12.22□□□□□ -0.45
CPNE1-221ENST00000462352 TPRG1Q6ZUI0 275 aa12.22□□□□□ -0.45
CPNE1-221ENST00000462352 CHSY1Q86X52 802 aa12.22□□□□□ -0.45
CPNE1-221ENST00000462352 ARFGAP1Q8N6T3 406 aa12.22□□□□□ -0.45
CPNE1-221ENST00000462352 CCDC185Q8N715 623 aa12.22□□□□□ -0.45
CPNE1-221ENST00000462352 CHFRQ96EP1 664 aa12.22□□□□□ -0.45
CPNE1-221ENST00000462352 P2RY11Q96G91 374 aa12.22□□□□□ -0.45
CPNE1-221ENST00000462352 DDX50Q9BQ39 737 aaKnown RBP12.22□□□□□ -0.45
CPNE1-221ENST00000462352 DESI2Q9BSY9 194 aa12.22□□□□□ -0.45
CPNE1-221ENST00000462352 BBS2Q9BXC9 721 aa12.22□□□□□ -0.45
CPNE1-221ENST00000462352 C8orf33Q9H7E9 229 aaPredicted RBP12.22□□□□□ -0.45
CPNE1-221ENST00000462352 MARK1Q9P0L2 795 aa12.22□□□□□ -0.45
CPNE1-221ENST00000462352 IP6K2Q9UHH9 426 aa12.22□□□□□ -0.45
CPNE1-221ENST00000462352 HS3ST4Q9Y661 456 aa12.22□□□□□ -0.45
CPNE1-221ENST00000462352 COL4A3Q01955 1670 aa12.22□□□□□ -0.45
CPNE1-221ENST00000462352 RCCD1A6NED2 376 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 SHISA7A6NL88 538 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 NEDD8-MDP1E9PL57 170 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 HOXC11O43248 304 aaPredicted RBP12.21□□□□□ -0.45
CPNE1-221ENST00000462352 NRDCO43847 1150 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 LRCH4O75427 683 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 MTA2O94776 668 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 PENKP01210 267 aaPredicted RBP12.21□□□□□ -0.45
CPNE1-221ENST00000462352 CYBBP04839 570 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 PTMAP06454 111 aaKnown RBP12.21□□□□□ -0.45
CPNE1-221ENST00000462352 TYRP14679 529 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 GLULP15104 373 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 CTHP32929 405 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 ADRA1BP35368 520 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 GGCXP38435 758 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 SGSHP51688 502 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 VAV2P52735 878 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 PRKCQQ04759 706 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 ACAP1Q15027 740 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 ARL13BQ3SXY8 428 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 MPPE1Q53F39 396 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 FYB2Q5VWT5 728 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 TXNDC11Q6PKC3 985 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 RALGPS2Q86X27 583 aaPredicted RBP12.21□□□□□ -0.45
CPNE1-221ENST00000462352 SIX5Q8N196 739 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 NIPA2Q8N8Q9 360 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 BHMTQ93088 406 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 NTAN1Q96AB6 310 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 TMA16Q96EY4 203 aaKnown RBP12.21□□□□□ -0.45
CPNE1-221ENST00000462352 MYEOVQ96EZ4 313 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 MSANTD3Q96H12 275 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 PRICKLE1Q96MT3 831 aaPredicted RBP12.21□□□□□ -0.45
CPNE1-221ENST00000462352 PRMT1Q99873 361 aaKnown RBP12.21□□□□□ -0.45
CPNE1-221ENST00000462352 IRX2Q9BZI1 471 aaPredicted RBP12.21□□□□□ -0.45
CPNE1-221ENST00000462352 SIK2Q9H0K1 926 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 PLK2Q9NYY3 685 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 LCMT1Q9UIC8 334 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 ADGRG1Q9Y653 693 aa12.21□□□□□ -0.45
CPNE1-221ENST00000462352 A0A0A6YYK5 440 aaPredicted RBP12.2□□□□□ -0.46
CPNE1-221ENST00000462352 F5H5T6 163 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 PJA2O43164 708 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 PROSCO94903 275 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 CD72P21854 359 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 MIPP30301 263 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 PCK1P35558 622 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 OPRD1P41143 372 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 STARD6P59095 220 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 AMPD2Q01433 879 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 SCAPQ12770 1279 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 AUHQ13825 339 aaKnown RBP12.2□□□□□ -0.46
CPNE1-221ENST00000462352 DAB2IPQ5VWQ8 1189 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 NAIF1Q69YI7 327 aaPredicted RBP12.2□□□□□ -0.46
CPNE1-221ENST00000462352 FBXL22Q6P050 247 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 SLFN11Q7Z7L1 901 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 C14orf80Q86SX3 495 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 KIAA1328Q86T90 577 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 C12orf40Q86WS4 652 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 LGI2Q8N0V4 545 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 NAT16Q8N8M0 369 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 HJURPQ8NCD3 748 aaPredicted RBP12.2□□□□□ -0.46
CPNE1-221ENST00000462352 DDI1Q8WTU0 396 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 SHDQ96IW2 340 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 C1orf74Q96LT6 269 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 HAPLN3Q96S86 360 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 PEBP4Q96S96 227 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 NCAPGQ9BPX3 1015 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 LACRTQ9GZZ8 138 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 EPHX3Q9H6B9 360 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 PCSK1NQ9UHG2 260 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 FZD10Q9ULW2 581 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 SNX10Q9Y5X0 201 aa12.2□□□□□ -0.46
CPNE1-221ENST00000462352 TRIOO75962 3097 aa12.19□□□□□ -0.46
CPNE1-221ENST00000462352 TMEM110-MUSTN1A8MSY1 372 aa12.19□□□□□ -0.46
CPNE1-221ENST00000462352 BTNL10A8MVZ5 291 aa12.19□□□□□ -0.46
CPNE1-221ENST00000462352 MAN2B1O00754 1011 aa12.19□□□□□ -0.46
CPNE1-221ENST00000462352 PRPSAP2O60256 369 aa12.19□□□□□ -0.46
CPNE1-221ENST00000462352 CACNG3O60359 315 aa12.19□□□□□ -0.46
CPNE1-221ENST00000462352 TBL1XO60907 577 aa12.19□□□□□ -0.46
CPNE1-221ENST00000462352 TCF4P15884 667 aa12.19□□□□□ -0.46
CPNE1-221ENST00000462352 HOXD9P28356 352 aaPredicted RBP12.19□□□□□ -0.46
CPNE1-221ENST00000462352 ARHGAP25P42331 645 aa12.19□□□□□ -0.46
CPNE1-221ENST00000462352 NOP2P46087 812 aaKnown RBP12.19□□□□□ -0.46
CPNE1-221ENST00000462352 SLC6A11P48066 632 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms