RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 KDELR1P24390 212 aa13.96□□□□□ -0.17
PBRM1-219ENST00000462207 L1CAMP32004 1257 aa13.96□□□□□ -0.17
PBRM1-219ENST00000462207 MTHFRP42898 656 aa13.96□□□□□ -0.17
PBRM1-219ENST00000462207 DPYSL3Q14195 570 aa13.96□□□□□ -0.17
PBRM1-219ENST00000462207 KRT81Q14533 505 aa13.96□□□□□ -0.17
PBRM1-219ENST00000462207 DPYSL2Q16555 572 aa13.96□□□□□ -0.17
PBRM1-219ENST00000462207 ARL13BQ3SXY8 428 aa13.96□□□□□ -0.17
PBRM1-219ENST00000462207 MS4A13Q5J8X5 152 aa13.96□□□□□ -0.17
PBRM1-219ENST00000462207 RAP1GAP2Q684P5 730 aa13.96□□□□□ -0.17
PBRM1-219ENST00000462207 C14orf80Q86SX3 495 aa13.96□□□□□ -0.17
PBRM1-219ENST00000462207 CCDC50Q8IVM0 306 aa13.96□□□□□ -0.17
PBRM1-219ENST00000462207 KCTD6Q8NC69 237 aa13.96□□□□□ -0.17
PBRM1-219ENST00000462207 SUSD6Q92537 303 aa13.96□□□□□ -0.17
PBRM1-219ENST00000462207 MYEOVQ96EZ4 313 aa13.96□□□□□ -0.17
PBRM1-219ENST00000462207 MS4A14Q96JA4 679 aa13.96□□□□□ -0.17
PBRM1-219ENST00000462207 BTN2A3PQ96KV6 586 aa13.96□□□□□ -0.17
PBRM1-219ENST00000462207 CALN1Q9BXU9 219 aa13.96□□□□□ -0.17
PBRM1-219ENST00000462207 TDP1Q9NUW8 608 aa13.96□□□□□ -0.17
PBRM1-219ENST00000462207 DDX56Q9NY93 547 aaKnown RBP13.96□□□□□ -0.17
PBRM1-219ENST00000462207 CDH7Q9ULB5 785 aa13.96□□□□□ -0.17
PBRM1-219ENST00000462207 NUP210Q8TEM1 1887 aaPredicted RBP13.96□□□□□ -0.18
PBRM1-219ENST00000462207 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.96□□□□□ -0.18
PBRM1-219ENST00000462207 VIPR2P41587 438 aa13.96□□□□□ -0.18
PBRM1-219ENST00000462207 HARS2P49590 506 aaKnown RBP13.96□□□□□ -0.18
PBRM1-219ENST00000462207 VCPP55072 806 aaKnown RBP13.96□□□□□ -0.18
PBRM1-219ENST00000462207 SEMA3BQ13214 749 aa13.96□□□□□ -0.18
PBRM1-219ENST00000462207 DNTTIP2Q5QJE6 756 aaKnown RBP13.96□□□□□ -0.18
PBRM1-219ENST00000462207 ARTNQ5T4W7 220 aa13.96□□□□□ -0.18
PBRM1-219ENST00000462207 SPOCD1Q6ZMY3 1216 aa13.96□□□□□ -0.18
PBRM1-219ENST00000462207 ATP6V0D2Q8N8Y2 350 aa13.96□□□□□ -0.18
PBRM1-219ENST00000462207 EXD1Q8NHP7 514 aa13.96□□□□□ -0.18
PBRM1-219ENST00000462207 KIF18AQ8NI77 898 aa13.96□□□□□ -0.18
PBRM1-219ENST00000462207 CAPZA3Q96KX2 299 aa13.96□□□□□ -0.18
PBRM1-219ENST00000462207 LRRC3BQ96PB8 259 aa13.96□□□□□ -0.18
PBRM1-219ENST00000462207 AGO1Q9UL18 857 aaKnown RBP13.96□□□□□ -0.18
PBRM1-219ENST00000462207 TRDMT1O14717 391 aaKnown RBP13.95□□□□□ -0.18
PBRM1-219ENST00000462207 CREB3O43889 395 aa13.95□□□□□ -0.18
PBRM1-219ENST00000462207 CEP104O60308 925 aa13.95□□□□□ -0.18
PBRM1-219ENST00000462207 URI1O94763 535 aaPredicted RBP13.95□□□□□ -0.18
PBRM1-219ENST00000462207 ZRANB2O95218 330 aaKnown RBP eCLIP13.95□□□□□ -0.18
PBRM1-219ENST00000462207 TUBB4AP04350 444 aa13.95□□□□□ -0.18
PBRM1-219ENST00000462207 KRT10P13645 584 aa13.95□□□□□ -0.18
PBRM1-219ENST00000462207 GOT1P17174 413 aa13.95□□□□□ -0.18
PBRM1-219ENST00000462207 SLC6A4P31645 630 aa13.95□□□□□ -0.18
PBRM1-219ENST00000462207 CDKN2BP42772 138 aa13.95□□□□□ -0.18
PBRM1-219ENST00000462207 IRAK1P51617 712 aa13.95□□□□□ -0.18
PBRM1-219ENST00000462207 AIF1P55008 147 aa13.95□□□□□ -0.18
PBRM1-219ENST00000462207 USP4Q13107 963 aa13.95□□□□□ -0.18
PBRM1-219ENST00000462207 ZNF77Q15935 545 aa13.95□□□□□ -0.18
PBRM1-219ENST00000462207 FAM133BQ5BKY9 247 aaKnown RBP13.95□□□□□ -0.18
PBRM1-219ENST00000462207 RFWD3Q6PCD5 774 aa13.95□□□□□ -0.18
PBRM1-219ENST00000462207 Q6ZNB5 142 aa13.95□□□□□ -0.18
PBRM1-219ENST00000462207 CHSY1Q86X52 802 aa13.95□□□□□ -0.18
PBRM1-219ENST00000462207 UNC45BQ8IWX7 931 aa13.95□□□□□ -0.18
PBRM1-219ENST00000462207 BBS7Q8IWZ6 715 aa13.95□□□□□ -0.18
PBRM1-219ENST00000462207 ASB16Q96NS5 453 aa13.95□□□□□ -0.18
PBRM1-219ENST00000462207 HAPLN3Q96S86 360 aa13.95□□□□□ -0.18
PBRM1-219ENST00000462207 CARD9Q9H257 536 aa13.95□□□□□ -0.18
PBRM1-219ENST00000462207 CWC15Q9P013 229 aaKnown RBP13.95□□□□□ -0.18
PBRM1-219ENST00000462207 OR12D3Q9UGF7 316 aa13.95□□□□□ -0.18
PBRM1-219ENST00000462207 NEU3Q9UQ49 428 aa13.95□□□□□ -0.18
PBRM1-219ENST00000462207 SAR1BQ9Y6B6 198 aa13.95□□□□□ -0.18
PBRM1-219ENST00000462207 SOBPA7XYQ1 873 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 ACSL4O60488 711 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 LRIG2O94898 1065 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 TCP1P17987 556 aaKnown RBP13.94□□□□□ -0.18
PBRM1-219ENST00000462207 FCARP24071 287 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 IL4RP24394 825 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 GBP2P32456 591 aaPredicted RBP13.94□□□□□ -0.18
PBRM1-219ENST00000462207 ADCY2Q08462 1091 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 ODF2Q5BJF6 829 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 KAZNQ674X7 775 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 PSTKQ8IV42 348 aaKnown RBP13.94□□□□□ -0.18
PBRM1-219ENST00000462207 RCOR2Q8IZ40 523 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 FAM71BQ8TC56 605 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 TSC1Q92574 1164 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 SMARCD2Q92925 531 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 RBM41Q96IZ5 413 aaKnown RBP13.94□□□□□ -0.18
PBRM1-219ENST00000462207 PRMT1Q99873 361 aaKnown RBP13.94□□□□□ -0.18
PBRM1-219ENST00000462207 HEMGNQ9BXL5 484 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 OSBPL2Q9H1P3 480 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 VANGL2Q9ULK5 521 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 SH3BP1Q9Y3L3 701 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 MFHAS1Q9Y4C4 1052 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 hCG_1818297A0A087WSY0 165 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 TCRBV7S2A1N4TA0A589 114 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 MBTPS2O43462 519 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 TACR2P21452 398 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 SLC11A2P49281 568 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 SGSHP51688 502 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 SMAD4Q13485 552 aaKnown RBP13.94□□□□□ -0.18
PBRM1-219ENST00000462207 AUHQ13825 339 aaKnown RBP13.94□□□□□ -0.18
PBRM1-219ENST00000462207 MANEALQ5VSG8 457 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 CIR1Q86X95 450 aaPredicted RBP13.94□□□□□ -0.18
PBRM1-219ENST00000462207 ZNF683Q8IZ20 524 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 PRICKLE1Q96MT3 831 aaPredicted RBP13.94□□□□□ -0.18
PBRM1-219ENST00000462207 CSPG4P5Q96PW8 444 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 PRDM6Q9NQX0 595 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 GDE1Q9NZC3 331 aa13.94□□□□□ -0.18
PBRM1-219ENST00000462207 SLC12A6Q9UHW9 1150 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms