RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 ZNF234Q14588 700 aa13.73□□□□□ -0.21
C9orf3-210ENST00000462125 DRAP1Q14919 205 aaPredicted RBP13.73□□□□□ -0.21
C9orf3-210ENST00000462125 TAF5Q15542 800 aa13.73□□□□□ -0.21
C9orf3-210ENST00000462125 HSP90AA4PQ58FG1 418 aa13.73□□□□□ -0.21
C9orf3-210ENST00000462125 EFHC1Q5JVL4 640 aa13.73□□□□□ -0.21
C9orf3-210ENST00000462125 CDKAL1Q5VV42 579 aa13.73□□□□□ -0.21
C9orf3-210ENST00000462125 NADSYN1Q6IA69 706 aa13.73□□□□□ -0.21
C9orf3-210ENST00000462125 RFWD3Q6PCD5 774 aa13.73□□□□□ -0.21
C9orf3-210ENST00000462125 SLC36A4Q6YBV0 504 aa13.73□□□□□ -0.21
C9orf3-210ENST00000462125 ADIPOR2Q86V24 386 aa13.73□□□□□ -0.21
C9orf3-210ENST00000462125 SLC47A2Q86VL8 602 aa13.73□□□□□ -0.21
C9orf3-210ENST00000462125 TMEFF1Q8IYR6 380 aa13.73□□□□□ -0.21
C9orf3-210ENST00000462125 WFIKKN2Q8TEU8 576 aa13.73□□□□□ -0.21
C9orf3-210ENST00000462125 LMLNQ96KR4 655 aa13.73□□□□□ -0.21
C9orf3-210ENST00000462125 CPXM1Q96SM3 734 aa13.73□□□□□ -0.21
C9orf3-210ENST00000462125 DDX50Q9BQ39 737 aaKnown RBP13.73□□□□□ -0.21
C9orf3-210ENST00000462125 SMOC1Q9H4F8 434 aa13.73□□□□□ -0.21
C9orf3-210ENST00000462125 TJP2Q9UDY2 1190 aa13.73□□□□□ -0.21
C9orf3-210ENST00000462125 KMT2BQ9UMN6 2715 aaPredicted RBP13.72□□□□□ -0.21
C9orf3-210ENST00000462125 LAMA1P25391 3075 aa13.72□□□□□ -0.21
C9orf3-210ENST00000462125 IGHV1OR15-9A0A0B4J2B8 117 aa13.72□□□□□ -0.21
C9orf3-210ENST00000462125 TRUB2O95900 331 aaKnown RBP13.72□□□□□ -0.21
C9orf3-210ENST00000462125 UCHL3P15374 230 aa13.72□□□□□ -0.21
C9orf3-210ENST00000462125 KRT9P35527 623 aa13.72□□□□□ -0.21
C9orf3-210ENST00000462125 PTGER3P43115 390 aa13.72□□□□□ -0.21
C9orf3-210ENST00000462125 DHPSP49366 369 aaPredicted RBP13.72□□□□□ -0.21
C9orf3-210ENST00000462125 STARD3Q14849 445 aa13.72□□□□□ -0.21
C9orf3-210ENST00000462125 FUT11Q495W5 492 aa13.72□□□□□ -0.21
C9orf3-210ENST00000462125 AASDHQ4L235 1098 aaPredicted RBP13.72□□□□□ -0.21
C9orf3-210ENST00000462125 MS4A13Q5J8X5 152 aa13.72□□□□□ -0.21
C9orf3-210ENST00000462125 TAC4Q86UU9 113 aa13.72□□□□□ -0.21
C9orf3-210ENST00000462125 ZNF557Q8N988 423 aaPredicted RBP13.72□□□□□ -0.21
C9orf3-210ENST00000462125 FIBINQ8TAL6 211 aa13.72□□□□□ -0.21
C9orf3-210ENST00000462125 ADAM32Q8TC27 787 aa13.72□□□□□ -0.21
C9orf3-210ENST00000462125 SORCS1Q8WY21 1168 aa13.72□□□□□ -0.21
C9orf3-210ENST00000462125 NOX5Q96PH1 765 aa13.72□□□□□ -0.21
C9orf3-210ENST00000462125 SLC2A13Q96QE2 648 aa13.72□□□□□ -0.21
C9orf3-210ENST00000462125 MKRN2Q9H000 416 aaKnown RBP13.72□□□□□ -0.21
C9orf3-210ENST00000462125 TMEM245Q9H330 911 aa13.72□□□□□ -0.21
C9orf3-210ENST00000462125 PLCB1Q9NQ66 1216 aa13.72□□□□□ -0.21
C9orf3-210ENST00000462125 ITM2CQ9NQX7 267 aa13.72□□□□□ -0.21
C9orf3-210ENST00000462125 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.72□□□□□ -0.21
C9orf3-210ENST00000462125 DCDC2BA2VCK2 349 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 GOLGA6L3A6NEY3 463 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 LRRC10BA6NIK2 292 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 KCNU1A8MYU2 1149 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 KHNYNO15037 678 aaKnown RBP13.71□□□□□ -0.21
C9orf3-210ENST00000462125 AP5Z1O43299 807 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 TBL1XO60907 577 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 PNMA6AP0CW24 399 aaPredicted RBP13.71□□□□□ -0.21
C9orf3-210ENST00000462125 PABPC1P11940 636 aaKnown RBP13.71□□□□□ -0.21
C9orf3-210ENST00000462125 CYP11B1P15538 503 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 CDH5P33151 784 aaPredicted RBP13.71□□□□□ -0.21
C9orf3-210ENST00000462125 DPP6P42658 865 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 SNX16P57768 344 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 PITX1P78337 314 aaPredicted RBP13.71□□□□□ -0.21
C9orf3-210ENST00000462125 PTPRNQ16849 979 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 DCAF6Q58WW2 860 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 ZC3H12AQ5D1E8 599 aaKnown RBP13.71□□□□□ -0.21
C9orf3-210ENST00000462125 STPG1Q5TH74 334 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 PEAR1Q5VY43 1037 aaPredicted RBP13.71□□□□□ -0.21
C9orf3-210ENST00000462125 TCEAL6Q6IPX3 200 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 C11orf57Q6ZUT1 292 aaPredicted RBP13.71□□□□□ -0.21
C9orf3-210ENST00000462125 CHST9Q7L1S5 443 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 CYP2U1Q7Z449 544 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 SYT12Q8IV01 421 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 PASD1Q8IV76 773 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 DEFB106AQ8N104 65 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 AHI1Q8N157 1196 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 ZNF397Q8NF99 534 aaPredicted RBP13.71□□□□□ -0.21
C9orf3-210ENST00000462125 DDX1Q92499 740 aaKnown RBP13.71□□□□□ -0.21
C9orf3-210ENST00000462125 PIGKQ92643 395 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 TCEAL3Q969E4 200 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 TTC17Q96AE7 1141 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 MYEOVQ96EZ4 313 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 BTN2A3PQ96KV6 586 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 PRICKLE1Q96MT3 831 aaPredicted RBP13.71□□□□□ -0.21
C9orf3-210ENST00000462125 STK33Q9BYT3 514 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 CIPCQ9C0C6 399 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 TMEM74BQ9NUR3 256 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 ABCB8Q9NUT2 735 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 EVLQ9UI08 416 aaPredicted RBP13.71□□□□□ -0.21
C9orf3-210ENST00000462125 GGA2Q9UJY4 613 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 PILRBQ9UKJ0 227 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 PLA2G4CQ9UP65 541 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 FHOD1Q9Y613 1164 aa13.71□□□□□ -0.21
C9orf3-210ENST00000462125 THADAQ6YHU6 1953 aa13.71□□□□□ -0.22
C9orf3-210ENST00000462125 CACNA1BQ00975 2339 aa13.7□□□□□ -0.22
C9orf3-210ENST00000462125 SYNCRIPO60506 623 aaKnown RBP13.7□□□□□ -0.22
C9orf3-210ENST00000462125 HSF2BPO75031 334 aa13.7□□□□□ -0.22
C9orf3-210ENST00000462125 ERBB2P04626 1255 aa13.7□□□□□ -0.22
C9orf3-210ENST00000462125 ATP5BP06576 529 aaKnown RBP13.7□□□□□ -0.22
C9orf3-210ENST00000462125 DLDP09622 509 aaKnown RBP13.7□□□□□ -0.22
C9orf3-210ENST00000462125 PRKCHP24723 683 aa13.7□□□□□ -0.22
C9orf3-210ENST00000462125 CD70P32970 193 aa13.7□□□□□ -0.22
C9orf3-210ENST00000462125 HOXD12P35452 270 aa13.7□□□□□ -0.22
C9orf3-210ENST00000462125 COPAP53621 1224 aa13.7□□□□□ -0.22
C9orf3-210ENST00000462125 RPS24P62847 133 aaKnown RBP13.7□□□□□ -0.22
C9orf3-210ENST00000462125 IRX4P78413 519 aa13.7□□□□□ -0.22
C9orf3-210ENST00000462125 CDK17Q00537 523 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms