RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 ETFBKMTQ8IXQ9 262 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 FAM172AQ8WUF8 416 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 CTNNBL1Q8WYA6 563 aaPredicted RBP12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 CENPIQ92674 756 aaPredicted RBP12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 ADAM33Q9BZ11 813 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 FOXQ1Q9C009 403 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 TKTL2Q9H0I9 626 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 THAP2Q9H0W7 228 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 ARHGEF38Q9NXL2 777 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 MYO1AQ9UBC5 1043 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 SIT1Q9Y3P8 196 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 FAM170BA6NMN3 283 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 CCP110O43303 1012 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 CYP1A2P05177 515 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 H2AFZP0C0S5 128 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 PSMA2P25787 234 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 CYLC1P35663 651 aaPredicted RBP12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 OPRD1P41143 372 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 GALK1P51570 392 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 GALCP54803 685 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 HDAC4P56524 1084 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 GSDMDP57764 484 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 C15orf59Q2T9L4 293 aaPredicted RBP12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 MS4A13Q5J8X5 152 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 DGKKQ5KSL6 1271 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 PIK3R6Q5UE93 754 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 NADSYN1Q6IA69 706 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 NUDT18Q6ZVK8 323 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 H2AFVQ71UI9 128 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 CHSY1Q86X52 802 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 FAM131BQ86XD5 332 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 CCDC105Q8IYK2 499 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 ZNF687Q8N1G0 1237 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 SYNPOQ8N3V7 929 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 ZNF557Q8N988 423 aaPredicted RBP12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 SPC24Q8NBT2 197 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 HJURPQ8NCD3 748 aaPredicted RBP12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 CCDC26Q8TAB7 109 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 DDI1Q8WTU0 396 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 TMA16Q96EY4 203 aaKnown RBP12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 PNKPQ96T60 521 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 NCAPGQ9BPX3 1015 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 SLC2A11Q9BYW1 496 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 LUC7LQ9NQ29 371 aaKnown RBP12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 SPTLC3Q9NUV7 552 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 DEC1Q9P2X7 70 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 NDRG2Q9UN36 371 aaKnown RBP12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 F5P12259 2224 aa12.08□□□□□ -0.48
TRAF3IP1-204ENST00000462122 F5H5T6 163 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 TSPAN3O60637 253 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 TULP3O75386 442 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 PAGE1O75459 146 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 IPO7O95373 1038 aaKnown RBP12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 TMEM253P0C7T8 217 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 TACR2P21452 398 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 SLC6A4P31645 630 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 GRIA2P42262 883 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 RPS9P46781 194 aaKnown RBP12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 ATXN1P54253 815 aaKnown RBP12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 AIF1P55008 147 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 CCINQ13939 588 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 FBXO43Q4G163 708 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 RABGAP1LQ5R372 815 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 TTC39BQ5VTQ0 682 aaPredicted RBP12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 RAP1GAP2Q684P5 730 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 RNF43Q68DV7 783 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 GRAMD4Q6IC98 578 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 RFWD3Q6PCD5 774 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 C12orf40Q86WS4 652 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 NAT16Q8N8M0 369 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 NTAN1Q96AB6 310 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 CLDN23Q96B33 292 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 HAPLN3Q96S86 360 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 PRMT1Q99873 361 aaKnown RBP12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 BAG1Q99933 345 aaPredicted RBP12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 IER2Q9BTL4 223 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 NUP85Q9BW27 656 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 ARHGEF4Q9NR80 690 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 DNAJC17Q9NVM6 304 aaKnown RBP12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 UVRAGQ9P2Y5 699 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 XPO7Q9UIA9 1087 aaKnown RBP12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 LCMT1Q9UIC8 334 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 FBXO10Q9UK96 956 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 INTUQ9ULD6 942 aa12.07□□□□□ -0.48
TRAF3IP1-204ENST00000462122 GOLGA6L7A0A1B0GV03 622 aa12.06□□□□□ -0.48
TRAF3IP1-204ENST00000462122 TBL1XO60907 577 aa12.06□□□□□ -0.48
TRAF3IP1-204ENST00000462122 RNF8O76064 485 aa12.06□□□□□ -0.48
TRAF3IP1-204ENST00000462122 KAT7O95251 611 aa12.06□□□□□ -0.48
TRAF3IP1-204ENST00000462122 LCA5LO95447 670 aa12.06□□□□□ -0.48
TRAF3IP1-204ENST00000462122 APODP05090 189 aa12.06□□□□□ -0.48
TRAF3IP1-204ENST00000462122 CHRNB1P11230 501 aa12.06□□□□□ -0.48
TRAF3IP1-204ENST00000462122 HOXD9P28356 352 aaPredicted RBP12.06□□□□□ -0.48
TRAF3IP1-204ENST00000462122 SLC6A11P48066 632 aa12.06□□□□□ -0.48
TRAF3IP1-204ENST00000462122 DGKGP49619 791 aa12.06□□□□□ -0.48
TRAF3IP1-204ENST00000462122 MRE11P49959 708 aa12.06□□□□□ -0.48
TRAF3IP1-204ENST00000462122 NUBP1P53384 320 aa12.06□□□□□ -0.48
TRAF3IP1-204ENST00000462122 OGDHQ02218 1023 aa12.06□□□□□ -0.48
TRAF3IP1-204ENST00000462122 PIGHQ14442 188 aaPredicted RBP12.06□□□□□ -0.48
TRAF3IP1-204ENST00000462122 ACAP1Q15027 740 aa12.06□□□□□ -0.48
TRAF3IP1-204ENST00000462122 SPA17Q15506 151 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms