RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 HLA-FP30511 346 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 OXTRP30559 389 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 SLC11A2P49281 568 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 TBX4P57082 545 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 RPL6Q02878 288 aaKnown RBP9.53□□□□□ -0.88
BRCA1-207ENST00000461798 ZNF33AQ06730 810 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 ZNF234Q14588 700 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 CAMK4Q16566 473 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 DUOXA1Q1HG43 343 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 FUT11Q495W5 492 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 FAM133BQ5BKY9 247 aaKnown RBP9.53□□□□□ -0.88
BRCA1-207ENST00000461798 TRIM61Q5EBN2 209 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 N4BP2L1Q5TBK1 243 aaPredicted RBP9.53□□□□□ -0.88
BRCA1-207ENST00000461798 PIK3R6Q5UE93 754 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 DENND1BQ6P3S1 775 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 TRIM65Q6PJ69 517 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 GBP6Q6ZN66 633 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 RABEPKQ7Z6M1 372 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 ADIPOR2Q86V24 386 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 SLC41A1Q8IVJ1 513 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 SCUBE3Q8IX30 993 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 GOLGA1Q92805 767 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 LMLNQ96KR4 655 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 DDX50Q9BQ39 737 aaKnown RBP9.53□□□□□ -0.88
BRCA1-207ENST00000461798 TRIM62Q9BVG3 475 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 NUSAP1Q9BXS6 441 aaKnown RBP9.53□□□□□ -0.88
BRCA1-207ENST00000461798 MKRN2Q9H000 416 aaKnown RBP9.53□□□□□ -0.88
BRCA1-207ENST00000461798 TMEM245Q9H330 911 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 PRDM16Q9HAZ2 1276 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 CAPN10Q9HC96 672 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 WSB2Q9NYS7 404 aaPredicted RBP9.53□□□□□ -0.88
BRCA1-207ENST00000461798 USP36Q9P275 1121 aaKnown RBP9.53□□□□□ -0.88
BRCA1-207ENST00000461798 CYP8B1Q9UNU6 501 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 NFE2L3Q9Y4A8 694 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 GON4LQ3T8J9 2241 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 ACACBO00763 2458 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 BECN2A8MW95 431 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 UPK3BL1B0FP48 263 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 UPK3BL2E5RIL1 263 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 PIK3R2O00459 728 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 PAPSS1O43252 624 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-207ENST00000461798 SYNCRIPO60506 623 aaKnown RBP9.52□□□□□ -0.89
BRCA1-207ENST00000461798 TSPAN3O60637 253 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 LETM1O95202 739 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-207ENST00000461798 SERPINF2P08697 491 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 KRT5P13647 590 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 SLC9A1P19634 815 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 PON1P27169 355 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 ERCC5P28715 1186 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-207ENST00000461798 PMLP29590 882 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 CD6P30203 668 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 SLC6A4P31645 630 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 COPAP53621 1224 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 SHC2P98077 582 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 EIF4EBP2Q13542 120 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-207ENST00000461798 CAMK2GQ13555 558 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-207ENST00000461798 CT47A1Q5JQC4 288 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-207ENST00000461798 THSD4Q6ZMP0 1018 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 CLEC17AQ6ZS10 378 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 ARMCX6Q7L4S7 300 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 TMPRSS6Q8IU80 811 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 WDTC1Q8N5D0 677 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 CADM4Q8NFZ8 388 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 FIBINQ8TAL6 211 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 DQX1Q8TE96 717 aaKnown RBP9.52□□□□□ -0.89
BRCA1-207ENST00000461798 CLEC4CQ8WTT0 213 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 DNASE2BQ8WZ79 361 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 SHC3Q92529 594 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 FOXJ1Q92949 421 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 FCRL2Q96LA5 508 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-207ENST00000461798 SERPINB11Q96P15 392 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 CRACR2AQ9BSW2 395 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 CIPCQ9C0C6 399 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 MIS12Q9H081 205 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 SLC6A17Q9H1V8 727 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 CLSTN2Q9H4D0 955 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 THAP9Q9H5L6 903 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 APEX2Q9UBZ4 518 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 CYTH4Q9UIA0 394 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 GGA2Q9UJY4 613 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 PLA2G4CQ9UP65 541 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 NAALADL1Q9UQQ1 740 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 TLR6Q9Y2C9 796 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 PLXND1Q9Y4D7 1925 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 THADAQ6YHU6 1953 aa9.52□□□□□ -0.89
BRCA1-207ENST00000461798 GOLGA6L7A0A1B0GV03 622 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 IGLV3-25P01717 112 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 GLI1P08151 1106 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 DLDP09622 509 aaKnown RBP9.51□□□□□ -0.89
BRCA1-207ENST00000461798 PABPC1P11940 636 aaKnown RBP9.51□□□□□ -0.89
BRCA1-207ENST00000461798 CEACAM1P13688 526 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 ENGP17813 658 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 PRKCHP24723 683 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 GNA15P30679 374 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 TPMTP51580 245 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 YWHAZP63104 245 aaKnown RBP9.51□□□□□ -0.89
BRCA1-207ENST00000461798 ZBTB16Q05516 673 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 PTPRNQ16849 979 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 EXOC3L4Q17RC7 722 aa9.51□□□□□ -0.89
BRCA1-207ENST00000461798 WDR45BQ5MNZ6 344 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms