RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 PAXBP1Q9Y5B6 917 aa10.98□□□□□ -0.65
TRAPPC12-213ENST00000461577 PCDHGA2Q9Y5H1 932 aa10.98□□□□□ -0.65
TRAPPC12-213ENST00000461577 R4GN57 208 aa10.98□□□□□ -0.65
TRAPPC12-213ENST00000461577 TMCO5BA8MYB1 307 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 KCNU1A8MYU2 1149 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 F5H5T6 163 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 K7ESF4 209 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 GFRA2O00451 464 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 TPM1P09493 284 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 KRT3P12035 628 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 SKILP12757 684 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 TDGF1P13385 188 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 TACR2P21452 398 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 FLT3P36888 993 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 NBL1P41271 181 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 PRKCIP41743 596 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 KIR2DL1P43626 348 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 FNTBP49356 437 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 SGSHP51688 502 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 GSCP56915 257 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 C1QBPQ07021 282 aaKnown RBP10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 PTP4A2Q12974 167 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 EIF4EBP2Q13542 120 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 E2F5Q15329 346 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 TDRD12Q587J7 1177 aaKnown RBP10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 MS4A13Q5J8X5 152 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 BRMS1LQ5PSV4 323 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 MPP7Q5T2T1 576 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 HEATR6Q6AI08 1181 aaKnown RBP10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 SDE2Q6IQ49 451 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 DNAJC24Q6P3W2 148 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 ARCQ7LC44 396 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 ZNF571Q7Z3V5 609 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 CAMKK1Q8N5S9 505 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 ALLCQ8N6M5 410 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 TXNDC5Q8NBS9 432 aaKnown RBP10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 UCMAQ8WVF2 138 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 RXFP2Q8WXD0 754 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 PGAP3Q96FM1 320 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 P2RY11Q96G91 374 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 HHIPQ96QV1 700 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 TBCBQ99426 244 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 PHOX2BQ99453 314 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 WDCPQ9H6R7 721 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 POLR3BQ9NW08 1133 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 XPO7Q9UIA9 1087 aaKnown RBP10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 TMEM59LQ9UK28 342 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 CAPN11Q9UMQ6 739 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 SLC27A6Q9Y2P4 619 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 LUC7L2Q9Y383 392 aaKnown RBP10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 STARD13Q9Y3M8 1113 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 BZW2Q9Y6E2 419 aaKnown RBP10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 ITIH6Q6UXX5 1313 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 FANCMQ8IYD8 2048 aa10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 MYO18AQ92614 2054 aaKnown RBP10.97□□□□□ -0.65
TRAPPC12-213ENST00000461577 ANKRD62A6NC57 917 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 ANTXRLA6NF34 631 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 PRRT4C9JH25 899 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 ALDH1A2O94788 518 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 GJB6O95452 261 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 APBB3O95704 486 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 PDGFRAP16234 1089 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 TFE3P19532 575 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 NTSR1P30989 418 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 SDC4P31431 198 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 RDXP35241 583 aaKnown RBP10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 CXCR3P49682 368 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 ATP11AP98196 1134 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 DMWDQ09019 674 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 TRIM14Q14142 442 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 GEN1Q17RS7 908 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 RABGAP1LQ5R372 815 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 OTUD1Q5VV17 481 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 EGFLAMQ63HQ2 1017 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 E4F1Q66K89 784 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 MON1BQ7L1V2 547 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 VPS36Q86VN1 386 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 WDR5BQ86VZ2 330 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 LONP2Q86WA8 852 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 MFN1Q8IWA4 741 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 CHPFQ8IZ52 775 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 MCOLN2Q8IZK6 566 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 CFAP52Q8N1V2 620 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 CARNMT1Q8N4J0 409 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 EMC1Q8N766 993 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 IL17RCQ8NAC3 791 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 C3orf20Q8ND61 904 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 TSTD1Q8NFU3 115 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 WFIKKN2Q8TEU8 576 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 SYN2Q92777 582 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 NKD2Q969F2 451 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 NT5C3BQ969T7 300 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 VCPIP1Q96JH7 1222 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 CFAP57Q96MR6 1250 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 PRICKLE1Q96MT3 831 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 SYT11Q9BT88 431 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 CIPCQ9C0C6 399 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 TKTL2Q9H0I9 626 aa10.96□□□□□ -0.65
TRAPPC12-213ENST00000461577 SEMA4AQ9H3S1 761 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms