RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 TTYH3Q9C0H2 523 aa13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 VPS45Q9NRW7 570 aa13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 RRN3Q9NYV6 651 aa13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 MARK1Q9P0L2 795 aa13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 CAPN11Q9UMQ6 739 aa13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 NAALADL1Q9UQQ1 740 aa13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 BZW2Q9Y6E2 419 aaKnown RBP13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 SLC30A4O14863 429 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 CACNG3O60359 315 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 FYNP06241 537 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 CORO1AP31146 461 aaKnown RBP13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 HOXC13P31276 330 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 MPLP40238 635 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 KIR2DL1P43626 348 aaPredicted RBP13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 DGKGP49619 791 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 TBX4P57082 545 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 CREB5Q02930 508 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 RING1Q06587 406 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 NNTQ13423 1086 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 TRIM14Q14142 442 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 CLEC16AQ2KHT3 1053 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 TSR1Q2NL82 804 aaKnown RBP13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 DCAF6Q58WW2 860 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 NUGGCQ68CJ6 796 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 SPECC1LQ69YQ0 1117 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 RALGAPA1Q6GYQ0 2036 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 OLFML1Q6UWY5 402 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 ITIH6Q6UXX5 1313 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 SLC26A9Q7LBE3 791 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 RASSF3Q86WH2 238 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 TERB1Q8NA31 727 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 CPLX3Q8WVH0 158 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 TPSD1Q9BZJ3 242 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 DUSP15Q9H1R2 295 aaPredicted RBP13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 SPTBN4Q9H254 2564 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 TJP2Q9UDY2 1190 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 SLC12A6Q9UHW9 1150 aa13.77□□□□□ -0.21
RAB11FIP3-207ENST00000461009 SGK1O00141 431 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 GREM1O60565 184 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 LATS1O95835 1130 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 CALB1P05937 261 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 SLC2A3P11169 496 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 UNGP13051 313 aaPredicted RBP13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 MMP8P22894 467 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 NTSR1P30989 418 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 NOS2P35228 1153 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 PRKCIP41743 596 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 SLC11A2P49281 568 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 RNASE9P60153 205 aaKnown RBP13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 EMC10Q5UCC4 262 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 Q6ZNB5 142 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 LPCAT2Q7L5N7 544 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 VPS36Q86VN1 386 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 XYLT1Q86Y38 959 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 DENND1CQ8IV53 801 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 DEFB106AQ8N104 65 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 MDGA1Q8NFP4 955 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 SLC30A5Q8TAD4 765 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 DQX1Q8TE96 717 aaKnown RBP13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 HMGB4Q8WW32 186 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 WBP2Q969T9 261 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 AZIN2Q96A70 460 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 DDX50Q9BQ39 737 aaKnown RBP13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 TRIM5Q9C035 493 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 HAUS4Q9H6D7 363 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 ADAM22Q9P0K1 906 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 AGO1Q9UL18 857 aaKnown RBP13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 INVSQ9Y283 1065 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 TLR6Q9Y2C9 796 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 STARD13Q9Y3M8 1113 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 GPR179Q6PRD1 2367 aa13.76□□□□□ -0.21
RAB11FIP3-207ENST00000461009 TCRBV21S2A2A0A5A6 115 aa13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 DCDC2BA2VCK2 349 aa13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 DCLK1O15075 740 aa13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 DAB1O75553 588 aa13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 GRAP2O75791 330 aa13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 TRUB2O95900 331 aaKnown RBP13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 F9P00740 461 aa13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 KLKB1P03952 638 aa13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 HOXB2P14652 356 aa13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 DPP6P42658 865 aa13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 MATKP42679 507 aa13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 LIMK1P53667 647 aa13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 CENPCQ03188 943 aa13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 MTA1Q13330 715 aa13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 TAF5Q15542 800 aa13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 FAM102AQ5T9C2 384 aaPredicted RBP13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 SYPL2Q5VXT5 272 aa13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 ACAD10Q6JQN1 1059 aa13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 SARM1Q6SZW1 724 aa13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 TMEM92Q6UXU6 159 aa13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 MMS22LQ6ZRQ5 1243 aa13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 ARCQ7LC44 396 aa13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 PHF13Q86YI8 300 aaPredicted RBP13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 CHPFQ8IZ52 775 aa13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 PHTF2Q8N3S3 785 aa13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 UCMAQ8WVF2 138 aa13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 RNF34Q969K3 372 aa13.75□□□□□ -0.21
RAB11FIP3-207ENST00000461009 SLC2A13Q96QE2 648 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms