RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 PPP3CCP48454 512 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 KPNA1P52294 538 aaPredicted RBP25.23■■□□□ 1.63
U2AF1-204ENST00000459639 NRG1Q02297 640 aaPredicted RBP25.23■■□□□ 1.63
U2AF1-204ENST00000459639 MREGQ8N565 214 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 GLIS1Q8NBF1 620 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 FBXO25Q8TCJ0 367 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 PSMG2Q969U7 264 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 GDAP1L1Q96MZ0 367 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 OLFM3Q96PB7 478 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 CCSER2Q9H7U1 834 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 ALG13Q9NP73 1137 aaKnown RBP25.23■■□□□ 1.63
U2AF1-204ENST00000459639 DTLQ9NZJ0 730 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 MTCL1Q9Y4B5 1905 aaKnown RBP25.23■■□□□ 1.63
U2AF1-204ENST00000459639 ZNF840PA6NDX5 716 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 TGM5O43548 720 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 LRIG2O94898 1065 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 TBX18O95935 607 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 IGLV3-27P01718 113 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 ERCC2P18074 760 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 VPS41P49754 854 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 GDF10P55107 478 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 ERVFC1P60507 584 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 CAV1Q03135 178 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 RING1Q06587 406 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 SLC10A2Q12908 348 aaPredicted RBP25.23■■□□□ 1.63
U2AF1-204ENST00000459639 LILRA6Q6PI73 481 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 ITIH5Q86UX2 942 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 UNC45BQ8IWX7 931 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 SPPL3Q8TCT6 385 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 C17orf80Q9BSJ5 609 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 TLR9Q9NR96 1032 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 TRPM5Q9NZQ8 1165 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 MTRF1LQ9UGC7 380 aaKnown RBP25.23■■□□□ 1.63
U2AF1-204ENST00000459639 SNX10Q9Y5X0 201 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 RAD54BQ9Y620 910 aa25.23■■□□□ 1.63
U2AF1-204ENST00000459639 NDC80O14777 642 aa25.22■■□□□ 1.63
U2AF1-204ENST00000459639 MFSD11O43934 449 aa25.22■■□□□ 1.63
U2AF1-204ENST00000459639 SASH3O75995 380 aa25.22■■□□□ 1.63
U2AF1-204ENST00000459639 IFNB1P01574 187 aa25.22■■□□□ 1.63
U2AF1-204ENST00000459639 RB1P06400 928 aa25.22■■□□□ 1.63
U2AF1-204ENST00000459639 TUBP50607 506 aa25.22■■□□□ 1.63
U2AF1-204ENST00000459639 MTA1Q13330 715 aa25.22■■□□□ 1.63
U2AF1-204ENST00000459639 C9orf50Q5SZB4 431 aa25.22■■□□□ 1.63
U2AF1-204ENST00000459639 MANEALQ5VSG8 457 aa25.22■■□□□ 1.63
U2AF1-204ENST00000459639 KLHDC10Q6PID8 442 aa25.22■■□□□ 1.63
U2AF1-204ENST00000459639 PDZD4Q76G19 769 aaPredicted RBP25.22■■□□□ 1.63
U2AF1-204ENST00000459639 POF1BQ8WVV4 589 aa25.22■■□□□ 1.63
U2AF1-204ENST00000459639 LRRC45Q96CN5 670 aa25.22■■□□□ 1.63
U2AF1-204ENST00000459639 QKIQ96PU8 341 aaKnown RBP eCLIP25.22■■□□□ 1.63
U2AF1-204ENST00000459639 C10orf88Q9H8K7 445 aa25.22■■□□□ 1.63
U2AF1-204ENST00000459639 VIPAS39Q9H9C1 493 aa25.22■■□□□ 1.63
U2AF1-204ENST00000459639 HBS1LQ9Y450 684 aaKnown RBP25.22■■□□□ 1.63
U2AF1-204ENST00000459639 MFHAS1Q9Y4C4 1052 aa25.22■■□□□ 1.63
U2AF1-204ENST00000459639 ASB3Q9Y575 518 aa25.22■■□□□ 1.63
U2AF1-204ENST00000459639 HACD1B0YJ81 288 aa25.21■■□□□ 1.63
U2AF1-204ENST00000459639 ETS1P14921 441 aa25.21■■□□□ 1.63
U2AF1-204ENST00000459639 HOXC13P31276 330 aa25.21■■□□□ 1.63
U2AF1-204ENST00000459639 SLC45A4Q5BKX6 768 aa25.21■■□□□ 1.63
U2AF1-204ENST00000459639 HECTD3Q5T447 861 aa25.21■■□□□ 1.63
U2AF1-204ENST00000459639 CCDC149Q6ZUS6 474 aa25.21■■□□□ 1.63
U2AF1-204ENST00000459639 PRUNE1Q86TP1 453 aa25.21■■□□□ 1.63
U2AF1-204ENST00000459639 MIB1Q86YT6 1006 aa25.21■■□□□ 1.63
U2AF1-204ENST00000459639 ATP6V0D2Q8N8Y2 350 aa25.21■■□□□ 1.63
U2AF1-204ENST00000459639 MRPL43Q8N983 215 aaKnown RBP25.21■■□□□ 1.63
U2AF1-204ENST00000459639 FAM71DQ8N9W8 422 aa25.21■■□□□ 1.63
U2AF1-204ENST00000459639 RTP4Q96DX8 246 aa25.21■■□□□ 1.63
U2AF1-204ENST00000459639 ABHD8Q96I13 439 aa25.21■■□□□ 1.63
U2AF1-204ENST00000459639 C1orf74Q96LT6 269 aa25.21■■□□□ 1.63
U2AF1-204ENST00000459639 SIK2Q9H0K1 926 aa25.21■■□□□ 1.63
U2AF1-204ENST00000459639 DNMT3LQ9UJW3 386 aa25.21■■□□□ 1.63
U2AF1-204ENST00000459639 NR2E3Q9Y5X4 410 aa25.21■■□□□ 1.63
U2AF1-204ENST00000459639 SLC12A8A0AV02 714 aa25.2■■□□□ 1.63
U2AF1-204ENST00000459639 C2orf71A6NGG8 1288 aa25.2■■□□□ 1.63
U2AF1-204ENST00000459639 MOCS2O96007 188 aaPredicted RBP25.2■■□□□ 1.63
U2AF1-204ENST00000459639 ZSCAN5DPP0CG00 497 aa25.2■■□□□ 1.63
U2AF1-204ENST00000459639 EPHB2P29323 1055 aa25.2■■□□□ 1.63
U2AF1-204ENST00000459639 ATP5C1P36542 298 aaKnown RBP25.2■■□□□ 1.63
U2AF1-204ENST00000459639 HSPA9P38646 679 aaKnown RBP25.2■■□□□ 1.63
U2AF1-204ENST00000459639 MAGEA10P43363 369 aaPredicted RBP25.2■■□□□ 1.63
U2AF1-204ENST00000459639 ITGA8P53708 1063 aa25.2■■□□□ 1.63
U2AF1-204ENST00000459639 P3H1Q32P28 736 aa25.2■■□□□ 1.63
U2AF1-204ENST00000459639 ACBD5Q5T8D3 534 aaPredicted RBP25.2■■□□□ 1.63
U2AF1-204ENST00000459639 IZUMO3Q5VZ72 239 aa25.2■■□□□ 1.63
U2AF1-204ENST00000459639 PLPP4Q5VZY2 271 aa25.2■■□□□ 1.63
U2AF1-204ENST00000459639 DNAJB7Q7Z6W7 309 aaPredicted RBP25.2■■□□□ 1.63
U2AF1-204ENST00000459639 USP29Q9HBJ7 922 aa25.2■■□□□ 1.63
U2AF1-204ENST00000459639 SLC12A6Q9UHW9 1150 aa25.2■■□□□ 1.63
U2AF1-204ENST00000459639 NEU3Q9UQ49 428 aa25.2■■□□□ 1.63
U2AF1-204ENST00000459639 DNALI1O14645 258 aaPredicted RBP25.2■■□□□ 1.62
U2AF1-204ENST00000459639 TP73O15350 636 aa25.2■■□□□ 1.62
U2AF1-204ENST00000459639 MAP3K6O95382 1288 aa25.2■■□□□ 1.62
U2AF1-204ENST00000459639 SERPINB6P35237 376 aa25.2■■□□□ 1.62
U2AF1-204ENST00000459639 GGCXP38435 758 aa25.2■■□□□ 1.62
U2AF1-204ENST00000459639 GPS1Q13098 491 aa25.2■■□□□ 1.62
U2AF1-204ENST00000459639 RHBDF2Q6PJF5 856 aa25.2■■□□□ 1.62
U2AF1-204ENST00000459639 TBC1D31Q96DN5 1066 aa25.2■■□□□ 1.62
U2AF1-204ENST00000459639 BTN2A3PQ96KV6 586 aa25.2■■□□□ 1.62
U2AF1-204ENST00000459639 SAMD11Q96NU1 681 aa25.2■■□□□ 1.62
U2AF1-204ENST00000459639 HS3ST4Q9Y661 456 aa25.2■■□□□ 1.62
U2AF1-204ENST00000459639 DENND4CQ5VZ89 1909 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms