RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 ZNF513Q8N8E2 541 aaPredicted RBP16.75■□□□□ 0.27
CD28-203ENST00000458610 PGAP3Q96FM1 320 aaPredicted RBP16.75■□□□□ 0.27
CD28-203ENST00000458610 VCPIP1Q96JH7 1222 aa16.75■□□□□ 0.27
CD28-203ENST00000458610 C11orf70Q9BRQ4 267 aa16.75■□□□□ 0.27
CD28-203ENST00000458610 SELENOOQ9BVL4 669 aa16.75■□□□□ 0.27
CD28-203ENST00000458610 TTYH3Q9C0H2 523 aa16.75■□□□□ 0.27
CD28-203ENST00000458610 WDCPQ9H6R7 721 aa16.75■□□□□ 0.27
CD28-203ENST00000458610 POLMQ9NP87 494 aaPredicted RBP16.75■□□□□ 0.27
CD28-203ENST00000458610 COX16Q9P0S2 106 aa16.75■□□□□ 0.27
CD28-203ENST00000458610 TMEM59LQ9UK28 342 aa16.75■□□□□ 0.27
CD28-203ENST00000458610 CAPN11Q9UMQ6 739 aa16.75■□□□□ 0.27
CD28-203ENST00000458610 LUC7L2Q9Y383 392 aaKnown RBP16.75■□□□□ 0.27
CD28-203ENST00000458610 GOLGA6L7A0A1B0GV03 622 aa16.74■□□□□ 0.27
CD28-203ENST00000458610 F5H5T6 163 aa16.74■□□□□ 0.27
CD28-203ENST00000458610 K7ESF4 209 aa16.74■□□□□ 0.27
CD28-203ENST00000458610 GFRA2O00451 464 aa16.74■□□□□ 0.27
CD28-203ENST00000458610 TBL1XO60907 577 aa16.74■□□□□ 0.27
CD28-203ENST00000458610 KLF8O95600 359 aaPredicted RBP16.74■□□□□ 0.27
CD28-203ENST00000458610 APBB3O95704 486 aa16.74■□□□□ 0.27
CD28-203ENST00000458610 KRT3P12035 628 aa16.74■□□□□ 0.27
CD28-203ENST00000458610 TDGF1P13385 188 aa16.74■□□□□ 0.27
CD28-203ENST00000458610 GSCP56915 257 aaPredicted RBP16.74■□□□□ 0.27
CD28-203ENST00000458610 ZBED6P86452 979 aa16.74■□□□□ 0.27
CD28-203ENST00000458610 FAM133BQ5BKY9 247 aaKnown RBP16.74■□□□□ 0.27
CD28-203ENST00000458610 MS4A13Q5J8X5 152 aa16.74■□□□□ 0.27
CD28-203ENST00000458610 RABGAP1LQ5R372 815 aa16.74■□□□□ 0.27
CD28-203ENST00000458610 EMC10Q5UCC4 262 aa16.74■□□□□ 0.27
CD28-203ENST00000458610 PKN3Q6P5Z2 889 aa16.74■□□□□ 0.27
CD28-203ENST00000458610 RFWD3Q6PCD5 774 aa16.74■□□□□ 0.27
CD28-203ENST00000458610 CHSY1Q86X52 802 aa16.74■□□□□ 0.27
CD28-203ENST00000458610 CCDC33Q8N5R6 958 aa16.74■□□□□ 0.27
CD28-203ENST00000458610 ALLCQ8N6M5 410 aa16.74■□□□□ 0.27
CD28-203ENST00000458610 IL17RCQ8NAC3 791 aa16.74■□□□□ 0.27
CD28-203ENST00000458610 TXNDC5Q8NBS9 432 aaKnown RBP16.74■□□□□ 0.27
CD28-203ENST00000458610 TSTD1Q8NFU3 115 aa16.74■□□□□ 0.27
CD28-203ENST00000458610 WFIKKN2Q8TEU8 576 aa16.74■□□□□ 0.27
CD28-203ENST00000458610 NT5C3BQ969T7 300 aa16.74■□□□□ 0.27
CD28-203ENST00000458610 PPP1R9BQ96SB3 815 aa16.74■□□□□ 0.27
CD28-203ENST00000458610 XPO4Q9C0E2 1151 aaKnown RBP16.74■□□□□ 0.27
CD28-203ENST00000458610 HAUS4Q9H6D7 363 aa16.74■□□□□ 0.27
CD28-203ENST00000458610 R4GN57 208 aa16.74■□□□□ 0.27
CD28-203ENST00000458610 ITIH6Q6UXX5 1313 aa16.73■□□□□ 0.27
CD28-203ENST00000458610 CACNA1IQ9P0X4 2223 aa16.73■□□□□ 0.27
CD28-203ENST00000458610 TRIM24O15164 1050 aa16.73■□□□□ 0.27
CD28-203ENST00000458610 TPM1P09493 284 aa16.73■□□□□ 0.27
CD28-203ENST00000458610 GZMAP12544 262 aa16.73■□□□□ 0.27
CD28-203ENST00000458610 HNRNPLP14866 589 aaKnown RBP eCLIP16.73■□□□□ 0.27
CD28-203ENST00000458610 TACR2P21452 398 aa16.73■□□□□ 0.27
CD28-203ENST00000458610 HOXD9P28356 352 aaPredicted RBP16.73■□□□□ 0.27
CD28-203ENST00000458610 NTSR1P30989 418 aa16.73■□□□□ 0.27
CD28-203ENST00000458610 SDC4P31431 198 aa16.73■□□□□ 0.27
CD28-203ENST00000458610 SLC6A4P31645 630 aa16.73■□□□□ 0.27
CD28-203ENST00000458610 CXCR3P49682 368 aa16.73■□□□□ 0.27
CD28-203ENST00000458610 OXCT1P55809 520 aa16.73■□□□□ 0.27
CD28-203ENST00000458610 PITX1P78337 314 aaPredicted RBP16.73■□□□□ 0.27
CD28-203ENST00000458610 MESP2Q0VG99 397 aa16.73■□□□□ 0.27
CD28-203ENST00000458610 TRIM14Q14142 442 aa16.73■□□□□ 0.27
CD28-203ENST00000458610 CRY1Q16526 586 aa16.73■□□□□ 0.27
CD28-203ENST00000458610 C2CD6Q53TS8 623 aa16.73■□□□□ 0.27
CD28-203ENST00000458610 TTC39BQ5VTQ0 682 aaPredicted RBP16.73■□□□□ 0.27
CD28-203ENST00000458610 NADSYN1Q6IA69 706 aa16.73■□□□□ 0.27
CD28-203ENST00000458610 WDR5BQ86VZ2 330 aa16.73■□□□□ 0.27
CD28-203ENST00000458610 CHPFQ8IZ52 775 aa16.73■□□□□ 0.27
CD28-203ENST00000458610 LGI2Q8N0V4 545 aa16.73■□□□□ 0.27
CD28-203ENST00000458610 RNF214Q8ND24 703 aa16.73■□□□□ 0.27
CD28-203ENST00000458610 C3orf20Q8ND61 904 aa16.73■□□□□ 0.27
CD28-203ENST00000458610 METTL5Q9NRN9 209 aaKnown RBP16.73■□□□□ 0.27
CD28-203ENST00000458610 SIGLEC16A6NMB1 481 aa16.72■□□□□ 0.27
CD28-203ENST00000458610 PRRT4C9JH25 899 aa16.72■□□□□ 0.27
CD28-203ENST00000458610 LILRB5O75023 590 aa16.72■□□□□ 0.27
CD28-203ENST00000458610 LMNAP02545 664 aaKnown RBP16.72■□□□□ 0.27
CD28-203ENST00000458610 PDGFRAP16234 1089 aa16.72■□□□□ 0.27
CD28-203ENST00000458610 RDXP35241 583 aaKnown RBP16.72■□□□□ 0.27
CD28-203ENST00000458610 FLT3P36888 993 aa16.72■□□□□ 0.27
CD28-203ENST00000458610 FNTBP49356 437 aa16.72■□□□□ 0.27
CD28-203ENST00000458610 PTP4A2Q12974 167 aa16.72■□□□□ 0.27
CD28-203ENST00000458610 TSR1Q2NL82 804 aaKnown RBP16.72■□□□□ 0.27
CD28-203ENST00000458610 ARL13BQ3SXY8 428 aa16.72■□□□□ 0.27
CD28-203ENST00000458610 RAP1GAP2Q684P5 730 aa16.72■□□□□ 0.27
CD28-203ENST00000458610 HEATR6Q6AI08 1181 aaKnown RBP16.72■□□□□ 0.27
CD28-203ENST00000458610 LRRC31Q6UY01 552 aa16.72■□□□□ 0.27
CD28-203ENST00000458610 MFN1Q8IWA4 741 aa16.72■□□□□ 0.27
CD28-203ENST00000458610 AHI1Q8N157 1196 aa16.72■□□□□ 0.27
CD28-203ENST00000458610 FIBINQ8TAL6 211 aa16.72■□□□□ 0.27
CD28-203ENST00000458610 CPLX3Q8WVH0 158 aa16.72■□□□□ 0.27
CD28-203ENST00000458610 ELOVL2Q9NXB9 296 aa16.72■□□□□ 0.27
CD28-203ENST00000458610 STIM2Q9P246 746 aa16.72■□□□□ 0.27
CD28-203ENST00000458610 EBF1Q9UH73 591 aa16.72■□□□□ 0.27
CD28-203ENST00000458610 RAB23Q9ULC3 237 aa16.72■□□□□ 0.27
CD28-203ENST00000458610 PLA2G4CQ9UP65 541 aa16.72■□□□□ 0.27
CD28-203ENST00000458610 CACNA1HO95180 2353 aa16.72■□□□□ 0.27
CD28-203ENST00000458610 H0Y626 953 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 AXIN1O15169 862 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 ENDOD1O94919 500 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 MOCS3O95396 460 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 SERPING1P05155 500 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 ATP5BP06576 529 aaKnown RBP16.71■□□□□ 0.27
CD28-203ENST00000458610 PABPC1P11940 636 aaKnown RBP16.71■□□□□ 0.27
CD28-203ENST00000458610 PTPN9P43378 593 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 CDH18Q13634 790 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms