RNA–Protein interactions for RNA: ENST00000457839.6

MBD1-210, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD1, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-210ENST00000457839 XRCC4Q13426 336 aa16.86■□□□□ 0.29
MBD1-210ENST00000457839 EFTUD2Q15029 972 aaKnown RBP eCLIP16.86■□□□□ 0.292e-6■■■■■ 37.3
MBD1-210ENST00000457839 PDIK1LQ8N165 341 aa16.86■□□□□ 0.29
MBD1-210ENST00000457839 P2RY11Q96G91 374 aa16.86■□□□□ 0.29
MBD1-210ENST00000457839 SELENOSQ9BQE4 189 aa16.86■□□□□ 0.29
MBD1-210ENST00000457839 RRN3Q9NYV6 651 aa16.86■□□□□ 0.29
MBD1-210ENST00000457839 GMIPQ9P107 970 aa16.86■□□□□ 0.29
MBD1-210ENST00000457839 TBX21Q9UL17 535 aa16.86■□□□□ 0.29
MBD1-210ENST00000457839 CDY1Q9Y6F8 540 aa16.86■□□□□ 0.29
MBD1-210ENST00000457839 MTMR11A4FU01 709 aa16.86■□□□□ 0.29
MBD1-210ENST00000457839 IRAK2O43187 625 aa16.86■□□□□ 0.29
MBD1-210ENST00000457839 ALDH7A1P49419 539 aaKnown RBP16.86■□□□□ 0.29
MBD1-210ENST00000457839 RWDD4Q6NW29 188 aaKnown RBP16.86■□□□□ 0.29
MBD1-210ENST00000457839 LRRC31Q6UY01 552 aa16.86■□□□□ 0.29
MBD1-210ENST00000457839 FUBP3Q96I24 572 aaKnown RBP eCLIP16.86■□□□□ 0.29
MBD1-210ENST00000457839 PAWRQ96IZ0 340 aaKnown RBP16.86■□□□□ 0.29
MBD1-210ENST00000457839 CELF6Q96J87 481 aaKnown RBP16.86■□□□□ 0.29
MBD1-210ENST00000457839 ZNF333Q96JL9 665 aa16.86■□□□□ 0.29
MBD1-210ENST00000457839 ROPN1BQ9BZX4 212 aaPredicted RBP16.86■□□□□ 0.29
MBD1-210ENST00000457839 ROPN1Q9HAT0 212 aaPredicted RBP16.86■□□□□ 0.29
MBD1-210ENST00000457839 PIH1D1Q9NWS0 290 aaKnown RBP16.86■□□□□ 0.29
MBD1-210ENST00000457839 CDH23Q9H251 3354 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 EXOC1LA0A1B0GW35 172 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 HOXA2O43364 376 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 IGLV3-25P01717 112 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 MDH1P40925 334 aaKnown RBP16.85■□□□□ 0.29
MBD1-210ENST00000457839 ELK3P41970 407 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 VSTM1Q6UX27 236 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 C3orf62Q6ZUJ4 267 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 EXOC3L1Q86VI1 746 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 SCML4Q8N228 414 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 LRRC43Q8N309 656 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 GIPC2Q8TF65 315 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 TOX2Q96NM4 488 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 SERPINB12Q96P63 405 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 TRIM56Q9BRZ2 755 aaKnown RBP16.85■□□□□ 0.29
MBD1-210ENST00000457839 TTPALQ9BTX7 342 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 MRPL9Q9BYD2 267 aaKnown RBP16.85■□□□□ 0.29
MBD1-210ENST00000457839 FNDC1Q4ZHG4 1894 aaPredicted RBP16.85■□□□□ 0.29
MBD1-210ENST00000457839 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.85■□□□□ 0.29
MBD1-210ENST00000457839 GCAP28676 217 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 EIF4EBP2Q13542 120 aaPredicted RBP16.85■□□□□ 0.29
MBD1-210ENST00000457839 IKBKEQ14164 716 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 LRRC26Q2I0M4 334 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 ANKRD20A2Q5SQ80 823 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 ANKRD20A1Q5TYW2 823 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 EMC10Q5UCC4 262 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 ANKRD20A3Q5VUR7 823 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 FOXR1Q6PIV2 292 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 ARHGEF18Q6ZSZ5 1173 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 VN1R3Q9BXE9 311 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 KLC2Q9H0B6 622 aa16.85■□□□□ 0.29
MBD1-210ENST00000457839 PRDM5Q9NQX1 630 aaPredicted RBP16.85■□□□□ 0.29
MBD1-210ENST00000457839 A0A087WUV0 522 aaPredicted RBP16.84■□□□□ 0.29
MBD1-210ENST00000457839 RNF103O00237 685 aa16.84■□□□□ 0.29
MBD1-210ENST00000457839 CHADO15335 359 aa16.84■□□□□ 0.29
MBD1-210ENST00000457839 PAGE1O75459 146 aa16.84■□□□□ 0.29
MBD1-210ENST00000457839 GCATO75600 419 aa16.84■□□□□ 0.29
MBD1-210ENST00000457839 AGTP01019 485 aa16.84■□□□□ 0.29
MBD1-210ENST00000457839 SEC24CP53992 1094 aa16.84■□□□□ 0.29
MBD1-210ENST00000457839 AIF1P55008 147 aa16.84■□□□□ 0.29
MBD1-210ENST00000457839 PAFAH1B3Q15102 231 aaKnown RBP16.84■□□□□ 0.29
MBD1-210ENST00000457839 MFSD5Q6N075 450 aa16.84■□□□□ 0.29
MBD1-210ENST00000457839 VPS52Q8N1B4 723 aa16.84■□□□□ 0.29
MBD1-210ENST00000457839 ARHGEF2Q92974 986 aaKnown RBP16.84■□□□□ 0.29
MBD1-210ENST00000457839 C8orf48Q96LL4 319 aa16.84■□□□□ 0.29
MBD1-210ENST00000457839 TANC1Q9C0D5 1861 aa16.84■□□□□ 0.29
MBD1-210ENST00000457839 MYO16Q9Y6X6 1858 aa16.84■□□□□ 0.29
MBD1-210ENST00000457839 OR6C75A6NL08 312 aa16.84■□□□□ 0.29
MBD1-210ENST00000457839 TRIM66O15016 1216 aa16.84■□□□□ 0.29
MBD1-210ENST00000457839 LSP1P33241 339 aa16.84■□□□□ 0.29
MBD1-210ENST00000457839 DEFB103AP81534 67 aa16.84■□□□□ 0.29
MBD1-210ENST00000457839 TNFAIP8L3Q5GJ75 292 aa16.84■□□□□ 0.29
MBD1-210ENST00000457839 CAND1Q86VP6 1230 aaKnown RBP16.84■□□□□ 0.29
MBD1-210ENST00000457839 EPAS1Q99814 870 aa16.84■□□□□ 0.29
MBD1-210ENST00000457839 SMOC2Q9H3U7 446 aa16.84■□□□□ 0.29
MBD1-210ENST00000457839 PPANQ9NQ55 473 aaKnown RBP16.84■□□□□ 0.29
MBD1-210ENST00000457839 MAGED2Q9UNF1 606 aaPredicted RBP16.84■□□□□ 0.29
MBD1-210ENST00000457839 SCML2Q9UQR0 700 aa16.84■□□□□ 0.29
MBD1-210ENST00000457839 PATJQ8NI35 1801 aa16.83■□□□□ 0.29
MBD1-210ENST00000457839 MICAL3Q7RTP6 2002 aa16.83■□□□□ 0.28
MBD1-210ENST00000457839 C5orf60A6NFR6 353 aa16.83■□□□□ 0.28
MBD1-210ENST00000457839 VGLL3A8MV65 326 aa16.83■□□□□ 0.28
MBD1-210ENST00000457839 E7ESA3 106 aa16.83■□□□□ 0.28
MBD1-210ENST00000457839 EIF3HO15372 352 aaKnown RBP eCLIP16.83■□□□□ 0.285e-7■■□□□ 12.6
MBD1-210ENST00000457839 CSF2RAP15509 400 aa16.83■□□□□ 0.28
MBD1-210ENST00000457839 GPR17Q13304 367 aa16.83■□□□□ 0.28
MBD1-210ENST00000457839 STAT4Q14765 748 aa16.83■□□□□ 0.28
MBD1-210ENST00000457839 PDK1Q15118 436 aa16.83■□□□□ 0.28
MBD1-210ENST00000457839 PRKD1Q15139 912 aaPredicted RBP16.83■□□□□ 0.28
MBD1-210ENST00000457839 TMED2Q15363 201 aa16.83■□□□□ 0.28
MBD1-210ENST00000457839 SPOUT1Q5T280 376 aaKnown RBP16.83■□□□□ 0.28
MBD1-210ENST00000457839 CEP128Q6ZU80 1094 aa16.83■□□□□ 0.28
MBD1-210ENST00000457839 MON1AQ86VX9 555 aa16.83■□□□□ 0.28
MBD1-210ENST00000457839 PALM2Q8IXS6 379 aa16.83■□□□□ 0.28
MBD1-210ENST00000457839 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.83■□□□□ 0.28
MBD1-210ENST00000457839 TTC25Q96NG3 672 aa16.83■□□□□ 0.28
MBD1-210ENST00000457839 RANBP2P49792 3224 aaKnown RBP16.83■□□□□ 0.28
MBD1-210ENST00000457839 E7EVH7 732 aa16.82■□□□□ 0.28
MBD1-210ENST00000457839 TBC1D4O60343 1298 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms