RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 MYEOVQ96EZ4 313 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 PRICKLE1Q96MT3 831 aaPredicted RBP14.65□□□□□ -0.06
SMPD4-215ENST00000457039 BBS2Q9BXC9 721 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 FOXQ1Q9C009 403 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 TKTL2Q9H0I9 626 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 WDCPQ9H6R7 721 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 FBRSL1Q9HCM7 1045 aaKnown RBP14.65□□□□□ -0.06
SMPD4-215ENST00000457039 FBXO10Q9UK96 956 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 MTF2Q9Y483 593 aaPredicted RBP14.65□□□□□ -0.06
SMPD4-215ENST00000457039 PAXBP1Q9Y5B6 917 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 MYOFQ9NZM1 2061 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 EIF3CLB5ME19 914 aaKnown RBP14.64□□□□□ -0.07
SMPD4-215ENST00000457039 NEDD8-MDP1E9PL57 170 aa14.64□□□□□ -0.07
SMPD4-215ENST00000457039 PAGE1O75459 146 aa14.64□□□□□ -0.07
SMPD4-215ENST00000457039 TACR2P21452 398 aa14.64□□□□□ -0.07
SMPD4-215ENST00000457039 TARSP26639 723 aaKnown RBP14.64□□□□□ -0.07
SMPD4-215ENST00000457039 GALK1P51570 392 aa14.64□□□□□ -0.07
SMPD4-215ENST00000457039 GSDMDP57764 484 aa14.64□□□□□ -0.07
SMPD4-215ENST00000457039 PON2Q15165 354 aa14.64□□□□□ -0.07
SMPD4-215ENST00000457039 MPPE1Q53F39 396 aa14.64□□□□□ -0.07
SMPD4-215ENST00000457039 TMEM196Q5HYL7 178 aa14.64□□□□□ -0.07
SMPD4-215ENST00000457039 C10orf76Q5T2E6 689 aa14.64□□□□□ -0.07
SMPD4-215ENST00000457039 ARTNQ5T4W7 220 aa14.64□□□□□ -0.07
SMPD4-215ENST00000457039 RAP1GAP2Q684P5 730 aa14.64□□□□□ -0.07
SMPD4-215ENST00000457039 RAD9BQ6WBX8 426 aa14.64□□□□□ -0.07
SMPD4-215ENST00000457039 SND1Q7KZF4 910 aaKnown RBP eCLIP14.64□□□□□ -0.07
SMPD4-215ENST00000457039 FAM131BQ86XD5 332 aa14.64□□□□□ -0.07
SMPD4-215ENST00000457039 ARFGAP1Q8N6T3 406 aa14.64□□□□□ -0.07
SMPD4-215ENST00000457039 CD101Q93033 1021 aa14.64□□□□□ -0.07
SMPD4-215ENST00000457039 PBXIP1Q96AQ6 731 aa14.64□□□□□ -0.07
SMPD4-215ENST00000457039 NELL2Q99435 816 aa14.64□□□□□ -0.07
SMPD4-215ENST00000457039 EIF3CQ99613 913 aaKnown RBP14.64□□□□□ -0.07
SMPD4-215ENST00000457039 BAG1Q99933 345 aaPredicted RBP14.64□□□□□ -0.07
SMPD4-215ENST00000457039 P2RY13Q9BPV8 354 aa14.64□□□□□ -0.07
SMPD4-215ENST00000457039 DDX50Q9BQ39 737 aaKnown RBP14.64□□□□□ -0.07
SMPD4-215ENST00000457039 NUP85Q9BW27 656 aa14.64□□□□□ -0.07
SMPD4-215ENST00000457039 OSBPL6Q9BZF3 934 aa14.64□□□□□ -0.07
SMPD4-215ENST00000457039 TMPRSS4Q9NRS4 437 aa14.64□□□□□ -0.07
SMPD4-215ENST00000457039 SLC12A6Q9UHW9 1150 aa14.64□□□□□ -0.07
SMPD4-215ENST00000457039 INTUQ9ULD6 942 aa14.64□□□□□ -0.07
SMPD4-215ENST00000457039 HS3ST4Q9Y661 456 aa14.64□□□□□ -0.07
SMPD4-215ENST00000457039 EPN1Q9Y6I3 576 aaPredicted RBP14.64□□□□□ -0.07
SMPD4-215ENST00000457039 GOLGA6L6A8MZA4 724 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 PRR33A8MZF0 331 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 TSPAN3O60637 253 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 TULP3O75386 442 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 NDUFA10O95299 355 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 CYBBP04839 570 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 CHRNB1P11230 501 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 AOC1P19801 751 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 PSMA2P25787 234 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 HOXD9P28356 352 aaPredicted RBP14.63□□□□□ -0.07
SMPD4-215ENST00000457039 ADRA1BP35368 520 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 CYLC1P35663 651 aaPredicted RBP14.63□□□□□ -0.07
SMPD4-215ENST00000457039 CLCN5P51795 746 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 MESP2Q0VG99 397 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 AUHQ13825 339 aaKnown RBP14.63□□□□□ -0.07
SMPD4-215ENST00000457039 CCINQ13939 588 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 C5orf22Q49AR2 442 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 MPP7Q5T2T1 576 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 FSTL4Q6MZW2 842 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 CHSY1Q86X52 802 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 CCDC105Q8IYK2 499 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 ZNF683Q8IZ20 524 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 FBXL6Q8N531 539 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 NAT16Q8N8M0 369 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 FLCNQ8NFG4 579 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 PJA1Q8NG27 643 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 DDI1Q8WTU0 396 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 CTNNBL1Q8WYA6 563 aaPredicted RBP14.63□□□□□ -0.07
SMPD4-215ENST00000457039 EZH1Q92800 747 aaPredicted RBP14.63□□□□□ -0.07
SMPD4-215ENST00000457039 NTAN1Q96AB6 310 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 TMA16Q96EY4 203 aaKnown RBP14.63□□□□□ -0.07
SMPD4-215ENST00000457039 C1orf74Q96LT6 269 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 HAPLN3Q96S86 360 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 C1QTNF1Q9BXJ1 281 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 MFSD1Q9H3U5 465 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 PLK2Q9NYY3 685 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 UVRAGQ9P2Y5 699 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 CLEC4EQ9ULY5 219 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 MRPS17Q9Y2R5 130 aaKnown RBP14.63□□□□□ -0.07
SMPD4-215ENST00000457039 KIAA1549LQ6ZVL6 1849 aa14.63□□□□□ -0.07
SMPD4-215ENST00000457039 A0A0A0MRY4 1105 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 FAM170BA6NMN3 283 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 TRIM24O15164 1050 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 PI15O43692 258 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 CISD3P0C7P0 127 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 GGCXP38435 758 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 MAGEA1P43355 309 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 RPS24P62847 133 aaKnown RBP14.62□□□□□ -0.07
SMPD4-215ENST00000457039 SCAPQ12770 1279 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 UBXN2BQ14CS0 331 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 ACAP1Q15027 740 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 TCEAL1Q15170 157 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 TMEM31Q5JXX7 168 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 ACBD5Q5T8D3 534 aaPredicted RBP14.62□□□□□ -0.07
SMPD4-215ENST00000457039 ASTLQ6HA08 431 aaPredicted RBP14.62□□□□□ -0.07
SMPD4-215ENST00000457039 FBXL22Q6P050 247 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 C14orf80Q86SX3 495 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 SUGP1Q8IWZ8 645 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms