RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 CFAP54Q96N23 3096 aa24.04■■□□□ 1.44
CBX3-204ENST00000456948 SYNJ2BP-COX16A0A087WUM0 186 aa24.04■■□□□ 1.44
CBX3-204ENST00000456948 A0A1B0GTH6 734 aa24.04■■□□□ 1.44
CBX3-204ENST00000456948 GFRA2O00451 464 aa24.04■■□□□ 1.44
CBX3-204ENST00000456948 TEX33O43247 280 aa24.04■■□□□ 1.44
CBX3-204ENST00000456948 IGLV3-25P01717 112 aa24.04■■□□□ 1.44
CBX3-204ENST00000456948 NSFP46459 744 aaKnown RBP24.04■■□□□ 1.44
CBX3-204ENST00000456948 PXNP49023 591 aaPredicted RBP24.04■■□□□ 1.44
CBX3-204ENST00000456948 SFTPA1Q8IWL2 248 aa24.04■■□□□ 1.44
CBX3-204ENST00000456948 PIWIL1Q96J94 861 aaKnown RBP24.04■■□□□ 1.44
CBX3-204ENST00000456948 COX16Q9P0S2 106 aa24.04■■□□□ 1.44
CBX3-204ENST00000456948 FAM186AA6NE01 2351 aa24.04■■□□□ 1.44
CBX3-204ENST00000456948 KCNU1A8MYU2 1149 aa24.03■■□□□ 1.44
CBX3-204ENST00000456948 PRRT4C9JH25 899 aa24.03■■□□□ 1.44
CBX3-204ENST00000456948 M0QYT0 321 aa24.03■■□□□ 1.44
CBX3-204ENST00000456948 SGK1O00141 431 aa24.03■■□□□ 1.44
CBX3-204ENST00000456948 HRO43593 1189 aa24.03■■□□□ 1.44
CBX3-204ENST00000456948 TBL1XO60907 577 aa24.03■■□□□ 1.44
CBX3-204ENST00000456948 CYP1A1P04798 512 aaPredicted RBP24.03■■□□□ 1.44
CBX3-204ENST00000456948 HOXB2P14652 356 aa24.03■■□□□ 1.44
CBX3-204ENST00000456948 HNRNPLP14866 589 aaKnown RBP eCLIP24.03■■□□□ 1.44
CBX3-204ENST00000456948 HOXD9P28356 352 aaPredicted RBP24.03■■□□□ 1.44
CBX3-204ENST00000456948 NME3Q13232 169 aa24.03■■□□□ 1.44
CBX3-204ENST00000456948 STARD3Q14849 445 aa24.03■■□□□ 1.44
CBX3-204ENST00000456948 LAIR1Q6GTX8 287 aa24.03■■□□□ 1.44
CBX3-204ENST00000456948 ANO7Q6IWH7 933 aa24.03■■□□□ 1.44
CBX3-204ENST00000456948 PPP1R2P3Q6NXS1 205 aa24.03■■□□□ 1.44
CBX3-204ENST00000456948 RFWD3Q6PCD5 774 aa24.03■■□□□ 1.44
CBX3-204ENST00000456948 LUZP1Q86V48 1076 aa24.03■■□□□ 1.44
CBX3-204ENST00000456948 XYLT1Q86Y38 959 aa24.03■■□□□ 1.44
CBX3-204ENST00000456948 PGBD3Q8N328 593 aa24.03■■□□□ 1.44
CBX3-204ENST00000456948 GPR161Q8N6U8 529 aaKnown RBP24.03■■□□□ 1.44
CBX3-204ENST00000456948 SLC20A1Q8WUM9 679 aa24.03■■□□□ 1.44
CBX3-204ENST00000456948 PLA2G4CQ9UP65 541 aa24.03■■□□□ 1.44
CBX3-204ENST00000456948 F5H5T6 163 aa24.02■■□□□ 1.44
CBX3-204ENST00000456948 TPM3P06753 285 aa24.02■■□□□ 1.44
CBX3-204ENST00000456948 FMO1Q01740 532 aa24.02■■□□□ 1.44
CBX3-204ENST00000456948 FAM133BQ5BKY9 247 aaKnown RBP24.02■■□□□ 1.44
CBX3-204ENST00000456948 MS4A13Q5J8X5 152 aa24.02■■□□□ 1.44
CBX3-204ENST00000456948 ACBD5Q5T8D3 534 aaPredicted RBP24.02■■□□□ 1.44
CBX3-204ENST00000456948 ARCQ7LC44 396 aa24.02■■□□□ 1.44
CBX3-204ENST00000456948 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.02■■□□□ 1.44
CBX3-204ENST00000456948 CHSY1Q86X52 802 aa24.02■■□□□ 1.44
CBX3-204ENST00000456948 NUP58Q9BVL2 599 aa24.02■■□□□ 1.44
CBX3-204ENST00000456948 EDEM3Q9BZQ6 932 aa24.02■■□□□ 1.44
CBX3-204ENST00000456948 CIPCQ9C0C6 399 aa24.02■■□□□ 1.44
CBX3-204ENST00000456948 POLR3BQ9NW08 1133 aaPredicted RBP24.02■■□□□ 1.44
CBX3-204ENST00000456948 ELOVL2Q9NXB9 296 aa24.02■■□□□ 1.44
CBX3-204ENST00000456948 STIM2Q9P246 746 aa24.02■■□□□ 1.44
CBX3-204ENST00000456948 GOLGA6L7A0A1B0GV03 622 aa24.01■■□□□ 1.43
CBX3-204ENST00000456948 GOLGA8SH3BPF8 625 aa24.01■■□□□ 1.43
CBX3-204ENST00000456948 ATP5BP06576 529 aaKnown RBP24.01■■□□□ 1.43
CBX3-204ENST00000456948 MMP8P22894 467 aa24.01■■□□□ 1.43
CBX3-204ENST00000456948 UBASH3AP57075 661 aa24.01■■□□□ 1.43
CBX3-204ENST00000456948 CDH18Q13634 790 aa24.01■■□□□ 1.43
CBX3-204ENST00000456948 NR1I3Q14994 352 aa24.01■■□□□ 1.43
CBX3-204ENST00000456948 GEN1Q17RS7 908 aa24.01■■□□□ 1.43
CBX3-204ENST00000456948 RABGAP1LQ5R372 815 aa24.01■■□□□ 1.43
CBX3-204ENST00000456948 TTC39BQ5VTQ0 682 aaPredicted RBP24.01■■□□□ 1.43
CBX3-204ENST00000456948 EGFLAMQ63HQ2 1017 aa24.01■■□□□ 1.43
CBX3-204ENST00000456948 TMEM92Q6UXU6 159 aa24.01■■□□□ 1.43
CBX3-204ENST00000456948 MFN1Q8IWA4 741 aa24.01■■□□□ 1.43
CBX3-204ENST00000456948 AHI1Q8N157 1196 aa24.01■■□□□ 1.43
CBX3-204ENST00000456948 AGPAT1Q99943 283 aa24.01■■□□□ 1.43
CBX3-204ENST00000456948 WDCPQ9H6R7 721 aa24.01■■□□□ 1.43
CBX3-204ENST00000456948 SYNCRIPO60506 623 aaKnown RBP24■■□□□ 1.43
CBX3-204ENST00000456948 ADAM23O75077 832 aa24■■□□□ 1.43
CBX3-204ENST00000456948 CALB1P05937 261 aa24■■□□□ 1.43
CBX3-204ENST00000456948 CHRNB2P17787 502 aa24■■□□□ 1.43
CBX3-204ENST00000456948 SLC6A4P31645 630 aa24■■□□□ 1.43
CBX3-204ENST00000456948 SULT1E1P49888 294 aa24■■□□□ 1.43
CBX3-204ENST00000456948 FANCCQ00597 558 aa24■■□□□ 1.43
CBX3-204ENST00000456948 SLC25A52Q3SY17 297 aa24■■□□□ 1.43
CBX3-204ENST00000456948 BRMS1LQ5PSV4 323 aa24■■□□□ 1.43
CBX3-204ENST00000456948 RASSF3Q86WH2 238 aa24■■□□□ 1.43
CBX3-204ENST00000456948 LGI2Q8N0V4 545 aa24■■□□□ 1.43
CBX3-204ENST00000456948 IQCDQ96DY2 449 aa24■■□□□ 1.43
CBX3-204ENST00000456948 SPACA7Q96KW9 195 aa24■■□□□ 1.43
CBX3-204ENST00000456948 NAP1L5Q96NT1 182 aaPredicted RBP24■■□□□ 1.43
CBX3-204ENST00000456948 PPP1R9BQ96SB3 815 aa24■■□□□ 1.43
CBX3-204ENST00000456948 GABRG3Q99928 467 aa24■■□□□ 1.43
CBX3-204ENST00000456948 NUCKS1Q9H1E3 243 aaKnown RBP24■■□□□ 1.43
CBX3-204ENST00000456948 ADAM22Q9P0K1 906 aa24■■□□□ 1.43
CBX3-204ENST00000456948 GGA2Q9UJY4 613 aa24■■□□□ 1.43
CBX3-204ENST00000456948 TCRBV21S2A2A0A5A6 115 aa23.99■■□□□ 1.43
CBX3-204ENST00000456948 RHOBTB1O94844 696 aa23.99■■□□□ 1.43
CBX3-204ENST00000456948 MOCS3O95396 460 aa23.99■■□□□ 1.43
CBX3-204ENST00000456948 POLR2EP19388 210 aaKnown RBP23.99■■□□□ 1.43
CBX3-204ENST00000456948 TACR2P21452 398 aa23.99■■□□□ 1.43
CBX3-204ENST00000456948 TNFAIP3P21580 790 aa23.99■■□□□ 1.43
CBX3-204ENST00000456948 OXCT1P55809 520 aa23.99■■□□□ 1.43
CBX3-204ENST00000456948 DEUP1Q05D60 604 aa23.99■■□□□ 1.43
CBX3-204ENST00000456948 EIF4EBP2Q13542 120 aaPredicted RBP23.99■■□□□ 1.43
CBX3-204ENST00000456948 ELF2Q15723 593 aa23.99■■□□□ 1.43
CBX3-204ENST00000456948 CLEC16AQ2KHT3 1053 aa23.99■■□□□ 1.43
CBX3-204ENST00000456948 RAP1GAP2Q684P5 730 aa23.99■■□□□ 1.43
CBX3-204ENST00000456948 NADSYN1Q6IA69 706 aa23.99■■□□□ 1.43
CBX3-204ENST00000456948 MMS22LQ6ZRQ5 1243 aa23.99■■□□□ 1.43
CBX3-204ENST00000456948 CARNMT1Q8N4J0 409 aa23.99■■□□□ 1.43
CBX3-204ENST00000456948 DCLK2Q8N568 766 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms