RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 C12orf50Q8NA57 414 aaPredicted RBP16.84■□□□□ 0.29
CPSF6-203ENST00000456847 WFIKKN2Q8TEU8 576 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 AZIN2Q96A70 460 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 SLC39A13Q96H72 371 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 GANQ9H2C0 597 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 ABCB8Q9NUT2 735 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 ASNSD1Q9NWL6 643 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 ELOVL2Q9NXB9 296 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 CALCOCO1Q9P1Z2 691 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 PCDHGA5Q9Y5G8 931 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 FAM170AA1A519 330 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 WASH3PC4AMC7 463 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 NPC1O15118 1278 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 P2RY2P41231 377 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 POLR2FP61218 127 aaKnown RBP16.84■□□□□ 0.29
CPSF6-203ENST00000456847 ZC3H12AQ5D1E8 599 aaKnown RBP16.84■□□□□ 0.29
CPSF6-203ENST00000456847 CAVIN1Q6NZI2 390 aaKnown RBP16.84■□□□□ 0.29
CPSF6-203ENST00000456847 CHST9Q7L1S5 443 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 CHSY1Q86X52 802 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 CCDC117Q8IWD4 279 aaPredicted RBP16.84■□□□□ 0.29
CPSF6-203ENST00000456847 ATP6V0D2Q8N8Y2 350 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 RNF34Q969K3 372 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 IRX2Q9BZI1 471 aaPredicted RBP16.84■□□□□ 0.29
CPSF6-203ENST00000456847 NAT10Q9H0A0 1025 aaKnown RBP16.84■□□□□ 0.29
CPSF6-203ENST00000456847 NUCKS1Q9H1E3 243 aaKnown RBP16.84■□□□□ 0.29
CPSF6-203ENST00000456847 NLRC4Q9NPP4 1024 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 DDIT4Q9NX09 232 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 THAP10Q9P2Z0 257 aaPredicted RBP16.84■□□□□ 0.29
CPSF6-203ENST00000456847 GGA2Q9UJY4 613 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 NUP205Q92621 2012 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 FOXD2O60548 495 aaPredicted RBP16.83■□□□□ 0.28
CPSF6-203ENST00000456847 DAB1O75553 588 aa16.83■□□□□ 0.28
CPSF6-203ENST00000456847 PABPC1P11940 636 aaKnown RBP16.83■□□□□ 0.28
CPSF6-203ENST00000456847 NDUFV2P19404 249 aa16.83■□□□□ 0.28
CPSF6-203ENST00000456847 SDHBP21912 280 aa16.83■□□□□ 0.28
CPSF6-203ENST00000456847 HLA-FP30511 346 aa16.83■□□□□ 0.28
CPSF6-203ENST00000456847 IL12RB1P42701 662 aa16.83■□□□□ 0.28
CPSF6-203ENST00000456847 DHPSP49366 369 aaPredicted RBP16.83■□□□□ 0.28
CPSF6-203ENST00000456847 PITX1P78337 314 aaPredicted RBP16.83■□□□□ 0.28
CPSF6-203ENST00000456847 ZNF234Q14588 700 aa16.83■□□□□ 0.28
CPSF6-203ENST00000456847 AASDHQ4L235 1098 aaPredicted RBP16.83■□□□□ 0.28
CPSF6-203ENST00000456847 OLFML1Q6UWY5 402 aa16.83■□□□□ 0.28
CPSF6-203ENST00000456847 KIAA1324Q6UXG2 1013 aaKnown RBP16.83■□□□□ 0.28
CPSF6-203ENST00000456847 MFN1Q8IWA4 741 aa16.83■□□□□ 0.28
CPSF6-203ENST00000456847 AHI1Q8N157 1196 aa16.83■□□□□ 0.28
CPSF6-203ENST00000456847 ZNF557Q8N988 423 aaPredicted RBP16.83■□□□□ 0.28
CPSF6-203ENST00000456847 MSANTD4Q8NCY6 345 aa16.83■□□□□ 0.28
CPSF6-203ENST00000456847 SORCS1Q8WY21 1168 aa16.83■□□□□ 0.28
CPSF6-203ENST00000456847 PRICKLE1Q96MT3 831 aaPredicted RBP16.83■□□□□ 0.28
CPSF6-203ENST00000456847 SLC2A13Q96QE2 648 aa16.83■□□□□ 0.28
CPSF6-203ENST00000456847 SPAG5Q96R06 1193 aa16.83■□□□□ 0.28
CPSF6-203ENST00000456847 LIMA1Q9UHB6 759 aaKnown RBP16.83■□□□□ 0.28
CPSF6-203ENST00000456847 SLC12A6Q9UHW9 1150 aa16.83■□□□□ 0.28
CPSF6-203ENST00000456847 CEP192Q8TEP8 1941 aa16.83■□□□□ 0.28
CPSF6-203ENST00000456847 SDK1Q7Z5N4 2213 aa16.83■□□□□ 0.28
CPSF6-203ENST00000456847 LGALS16A8MUM7 142 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 SYNCRIPO60506 623 aaKnown RBP16.82■□□□□ 0.28
CPSF6-203ENST00000456847 GFPT2O94808 682 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 SLC6A3Q01959 620 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 SYCP1Q15431 976 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 ANO6Q4KMQ2 910 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 FNDC3BQ53EP0 1204 aaKnown RBP16.82■□□□□ 0.28
CPSF6-203ENST00000456847 MPP7Q5T2T1 576 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 RAP1GAP2Q684P5 730 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 SERPINA13PQ6UXR4 307 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 LPCAT2Q7L5N7 544 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 CYP2U1Q7Z449 544 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 NOP9Q86U38 636 aaKnown RBP16.82■□□□□ 0.28
CPSF6-203ENST00000456847 CARNMT1Q8N4J0 409 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 ABCA7Q8IZY2 2146 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 CFAP54Q96N23 3096 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.82■□□□□ 0.28
CPSF6-203ENST00000456847 TIMM44O43615 452 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 IGLV3-25P01717 112 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 UBXN1Q04323 297 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 CDH18Q13634 790 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 PUM1Q14671 1186 aaKnown RBP eCLIP16.82■□□□□ 0.286e-6■■■■□ 24.2
CPSF6-203ENST00000456847 SF3A2Q15428 464 aaKnown RBP16.82■□□□□ 0.28
CPSF6-203ENST00000456847 MAP7D1Q3KQU3 841 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 MS4A13Q5J8X5 152 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 ARMCX6Q7L4S7 300 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 SLC26A9Q7LBE3 791 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 ERICH1Q86X53 443 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 ZDHHC17Q8IUH5 632 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 LGI2Q8N0V4 545 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 FRMD1Q8N878 549 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 NEK11Q8NG66 645 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 WFDC5Q8TCV5 224 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 EPS8L1Q8TE68 723 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 BTN2A3PQ96KV6 586 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 SLC6A17Q9H1V8 727 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 SMOC1Q9H4F8 434 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 VPS45Q9NRW7 570 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.82■□□□□ 0.28
CPSF6-203ENST00000456847 XPO7Q9UIA9 1087 aaKnown RBP16.82■□□□□ 0.28
CPSF6-203ENST00000456847 DAAM1Q9Y4D1 1078 aa16.82■□□□□ 0.28
CPSF6-203ENST00000456847 CKAP5Q14008 2032 aa16.81■□□□□ 0.28
CPSF6-203ENST00000456847 MUC22E2RYF6 1773 aaPredicted RBP16.81■□□□□ 0.28
CPSF6-203ENST00000456847 TNRC6BQ9UPQ9 1833 aaKnown RBP16.81■□□□□ 0.28
CPSF6-203ENST00000456847 LSM8O95777 96 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms