RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 NAA20P61599 178 aa10.6□□□□□ -0.71
CLIP4-208ENST00000456385 CREB5Q02930 508 aa10.6□□□□□ -0.71
CLIP4-208ENST00000456385 ENPEPQ07075 957 aa10.6□□□□□ -0.71
CLIP4-208ENST00000456385 CEACAM7Q14002 265 aa10.6□□□□□ -0.71
CLIP4-208ENST00000456385 PPP2R5DQ14738 602 aa10.6□□□□□ -0.71
CLIP4-208ENST00000456385 ZNF423Q2M1K9 1284 aa10.6□□□□□ -0.71
CLIP4-208ENST00000456385 NIPA1Q7RTP0 329 aa10.6□□□□□ -0.71
CLIP4-208ENST00000456385 PTAR1Q7Z6K3 402 aaPredicted RBP10.6□□□□□ -0.71
CLIP4-208ENST00000456385 SNX32Q86XE0 403 aa10.6□□□□□ -0.71
CLIP4-208ENST00000456385 CPNE9Q8IYJ1 553 aa10.6□□□□□ -0.71
CLIP4-208ENST00000456385 ADCY4Q8NFM4 1077 aa10.6□□□□□ -0.71
CLIP4-208ENST00000456385 TMEM143Q96AN5 459 aa10.6□□□□□ -0.71
CLIP4-208ENST00000456385 CGRRF1Q99675 332 aa10.6□□□□□ -0.71
CLIP4-208ENST00000456385 EBNA1BP2Q99848 306 aaKnown RBP10.6□□□□□ -0.71
CLIP4-208ENST00000456385 MSTO1Q9BUK6 570 aa10.6□□□□□ -0.71
CLIP4-208ENST00000456385 ZNF518BQ9C0D4 1074 aa10.6□□□□□ -0.71
CLIP4-208ENST00000456385 MTMR12Q9C0I1 747 aa10.6□□□□□ -0.71
CLIP4-208ENST00000456385 KLC2Q9H0B6 622 aa10.6□□□□□ -0.71
CLIP4-208ENST00000456385 SDCBP2Q9H190 292 aa10.6□□□□□ -0.71
CLIP4-208ENST00000456385 SEMA6AQ9H2E6 1030 aa10.6□□□□□ -0.71
CLIP4-208ENST00000456385 PFDN4Q9NQP4 134 aa10.6□□□□□ -0.71
CLIP4-208ENST00000456385 PAIP2BQ9ULR5 123 aaKnown RBP10.6□□□□□ -0.71
CLIP4-208ENST00000456385 NR2E3Q9Y5X4 410 aa10.6□□□□□ -0.71
CLIP4-208ENST00000456385 SH3PXD2BA1X283 911 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 RNASEH2AO75792 299 aaKnown RBP10.59□□□□□ -0.71
CLIP4-208ENST00000456385 STBD1O95210 358 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 ATG7O95352 703 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 HMGCRP04035 888 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 RALBP11234 206 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 MYL4P12829 197 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 PSMC3P17980 439 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 CDH5P33151 784 aaPredicted RBP10.59□□□□□ -0.71
CLIP4-208ENST00000456385 CDK9P50750 372 aaKnown RBP10.59□□□□□ -0.71
CLIP4-208ENST00000456385 JAK3P52333 1124 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 NDST2P52849 883 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 PIGGQ5H8A4 983 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 ITPRIPL1Q6GPH6 555 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 SWSAP1Q6NVH7 229 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 NAPRTQ6XQN6 538 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 Q6ZNX1 250 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 PQLC3Q8N755 202 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 PLD5Q8N7P1 536 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 ZSCAN18Q8TBC5 510 aaPredicted RBP10.59□□□□□ -0.71
CLIP4-208ENST00000456385 NLRP7Q8WX94 980 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 TUT1Q9H6E5 874 aaKnown RBP10.59□□□□□ -0.71
CLIP4-208ENST00000456385 WDR55Q9H6Y2 383 aaPredicted RBP10.59□□□□□ -0.71
CLIP4-208ENST00000456385 CAAP1Q9H8G2 361 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 PDLIM7Q9NR12 457 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 THEGQ9P2T0 379 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 EPS15L1Q9UBC2 864 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 COPG2Q9UBF2 871 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 SEPT9Q9UHD8 586 aaPredicted RBP10.59□□□□□ -0.71
CLIP4-208ENST00000456385 ZNF831Q5JPB2 1677 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 NEMP1O14524 444 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 ZBED1O96006 694 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 P4HA1P13674 534 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 ZNF23P17027 643 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 ZNF26P17031 533 aaPredicted RBP10.59□□□□□ -0.71
CLIP4-208ENST00000456385 SERPINB9P50453 376 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 CDH15P55291 814 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 PGM5Q15124 567 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 CDO1Q16878 200 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 C15orf59Q2T9L4 293 aaPredicted RBP10.59□□□□□ -0.71
CLIP4-208ENST00000456385 EPGNQ6UW88 154 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 TIFABQ6ZNK6 161 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 CYP4V2Q6ZWL3 525 aaPredicted RBP10.59□□□□□ -0.71
CLIP4-208ENST00000456385 PATL1Q86TB9 770 aaKnown RBP10.59□□□□□ -0.71
CLIP4-208ENST00000456385 XYLT1Q86Y38 959 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 CHERPQ8IWX8 916 aaKnown RBP10.59□□□□□ -0.71
CLIP4-208ENST00000456385 TMEM130Q8N3G9 435 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 KYQ8NBH2 561 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.59□□□□□ -0.71
CLIP4-208ENST00000456385 SYTL5Q8TDW5 730 aaPredicted RBP10.59□□□□□ -0.71
CLIP4-208ENST00000456385 GIPC3Q8TF64 312 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 SLC35B4Q969S0 331 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 WRNIP1Q96S55 665 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 XPNPEP3Q9NQH7 507 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 GPATCH2LQ9NWQ4 482 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 MOCS1Q9NZB8 636 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 EBF1Q9UH73 591 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 BARX2Q9UMQ3 279 aaPredicted RBP10.59□□□□□ -0.71
CLIP4-208ENST00000456385 DOLKQ9UPQ8 538 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 PCDHA11Q9Y5I1 949 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 PCDHA10Q9Y5I2 948 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 STYXL1Q9Y6J8 313 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 LTBP1Q14766 1721 aa10.59□□□□□ -0.71
CLIP4-208ENST00000456385 PRSS51A0A1B0GVH4 220 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 WDR27A2RRH5 827 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 GLRA3O75311 464 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 ENTPD3O75355 529 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 CSPG5O95196 566 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 COL6A2P12110 1019 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 ENO3P13929 434 aaPredicted RBP10.58□□□□□ -0.72
CLIP4-208ENST00000456385 FGFR3P22607 806 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 IL4RP24394 825 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 GRK2P25098 689 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 PIK3R1P27986 724 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 ALDH1B1P30837 517 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 SFNP31947 248 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 MAGEA3P43357 314 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms