RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 DCLK1O15075 740 aa15.52■□□□□ 0.08
LDLR-202ENST00000455727 RARBP10826 455 aa15.52■□□□□ 0.08
LDLR-202ENST00000455727 RPL9P32969 192 aaKnown RBP15.52■□□□□ 0.08
LDLR-202ENST00000455727 RASSF2P50749 326 aa15.52■□□□□ 0.08
LDLR-202ENST00000455727 HUNKP57058 714 aa15.52■□□□□ 0.08
LDLR-202ENST00000455727 AP1B1Q10567 949 aa15.52■□□□□ 0.08
LDLR-202ENST00000455727 CDHR3Q6ZTQ4 885 aa15.52■□□□□ 0.08
LDLR-202ENST00000455727 RFX8Q6ZV50 586 aa15.52■□□□□ 0.08
LDLR-202ENST00000455727 PDZD4Q76G19 769 aaPredicted RBP15.52■□□□□ 0.08
LDLR-202ENST00000455727 KIF2BQ8N4N8 673 aa15.52■□□□□ 0.08
LDLR-202ENST00000455727 IGSF9Q9P2J2 1179 aa15.52■□□□□ 0.08
LDLR-202ENST00000455727 BAIAP2L1Q9UHR4 511 aa15.52■□□□□ 0.08
LDLR-202ENST00000455727 CDH9Q9ULB4 789 aa15.52■□□□□ 0.08
LDLR-202ENST00000455727 GIT1Q9Y2X7 761 aa15.52■□□□□ 0.08
LDLR-202ENST00000455727 TRAFD1O14545 582 aaPredicted RBP15.52■□□□□ 0.07
LDLR-202ENST00000455727 NRP1O14786 923 aa15.52■□□□□ 0.07
LDLR-202ENST00000455727 HGSO14964 777 aaPredicted RBP15.52■□□□□ 0.07
LDLR-202ENST00000455727 HNRNPCL1O60812 293 aaKnown RBP15.52■□□□□ 0.07
LDLR-202ENST00000455727 CRHR1P34998 444 aa15.52■□□□□ 0.07
LDLR-202ENST00000455727 MLH1P40692 756 aa15.52■□□□□ 0.07
LDLR-202ENST00000455727 SEMA3BQ13214 749 aa15.52■□□□□ 0.07
LDLR-202ENST00000455727 NME3Q13232 169 aa15.52■□□□□ 0.07
LDLR-202ENST00000455727 HFE2Q6ZVN8 426 aa15.52■□□□□ 0.07
LDLR-202ENST00000455727 MARK2Q7KZI7 788 aaKnown RBP15.52■□□□□ 0.07
LDLR-202ENST00000455727 FAM35AQ86V20 835 aa15.52■□□□□ 0.07
LDLR-202ENST00000455727 RASAL3Q86YV0 1011 aa15.52■□□□□ 0.07
LDLR-202ENST00000455727 GAD1Q99259 594 aa15.52■□□□□ 0.07
LDLR-202ENST00000455727 SMOQ99835 787 aa15.52■□□□□ 0.07
LDLR-202ENST00000455727 ULBP1Q9BZM6 244 aa15.52■□□□□ 0.07
LDLR-202ENST00000455727 PRDM12Q9H4Q4 367 aa15.52■□□□□ 0.07
LDLR-202ENST00000455727 WDR6Q9NNW5 1121 aaKnown RBP15.52■□□□□ 0.07
LDLR-202ENST00000455727 KANSL3Q9P2N6 904 aa15.52■□□□□ 0.07
LDLR-202ENST00000455727 MTO1Q9Y2Z2 717 aaKnown RBP15.52■□□□□ 0.07
LDLR-202ENST00000455727 HMX2A2RU54 273 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 MEIS3P2A8K0S8 358 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 CAPN9O14815 690 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 NCAM2O15394 837 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 CREB3O43889 395 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 UGT1A9O60656 530 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 AP1G2O75843 785 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 RPLP2P05387 115 aaKnown RBP15.51■□□□□ 0.07
LDLR-202ENST00000455727 T-ENOLP0DO92 83 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 IGFBP6P24592 240 aaPredicted RBP15.51■□□□□ 0.07
LDLR-202ENST00000455727 ZNF135P52742 658 aaPredicted RBP15.51■□□□□ 0.07
LDLR-202ENST00000455727 WASHC5Q12768 1159 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 NAB1Q13506 487 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 WLSQ5T9L3 541 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 RPAINQ86UA6 219 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 PDCD7Q8N8D1 485 aaKnown RBP15.51■□□□□ 0.07
LDLR-202ENST00000455727 RAB3IL1Q8TBN0 382 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 PCED1BQ96HM7 432 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 UGT1A7Q9HAW7 530 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 UGT1A10Q9HAW8 530 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 UGT1A8Q9HAW9 530 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 ALG13Q9NP73 1137 aaKnown RBP15.51■□□□□ 0.07
LDLR-202ENST00000455727 TMPRSS4Q9NRS4 437 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 FBXW11Q9UKB1 542 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 TRIM33Q9UPN9 1127 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 YJEFN3A6XGL0 299 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 E7ENQ6 273 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 C6orf222P0C671 652 aaPredicted RBP15.51■□□□□ 0.07
LDLR-202ENST00000455727 NEFHP12036 1026 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 BGNP21810 368 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 CLCNKBP51801 687 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 STXBP5Q5T5C0 1151 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 DSTYKQ6XUX3 929 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 MRPL10Q7Z7H8 261 aaKnown RBP15.51■□□□□ 0.07
LDLR-202ENST00000455727 RNF169Q8NCN4 708 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 ZMIZ2Q8NF64 920 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 RFWD2Q8NHY2 731 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 SLC7A14Q8TBB6 771 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 ACMSDQ8TDX5 336 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 DEPDC1BQ8WUY9 529 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 TUBB6Q9BUF5 446 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 SENP6Q9GZR1 1112 aaPredicted RBP15.51■□□□□ 0.07
LDLR-202ENST00000455727 BRD8Q9H0E9 1235 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 ZFP69BQ9UJL9 534 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 NR2E3Q9Y5X4 410 aa15.51■□□□□ 0.07
LDLR-202ENST00000455727 SYNJ2BP-COX16A0A087WUM0 186 aa15.5■□□□□ 0.07
LDLR-202ENST00000455727 WDR27A2RRH5 827 aa15.5■□□□□ 0.07
LDLR-202ENST00000455727 MYBPHLA2RUH7 354 aa15.5■□□□□ 0.07
LDLR-202ENST00000455727 ARL5CA6NH57 179 aa15.5■□□□□ 0.07
LDLR-202ENST00000455727 DNAJC6O75061 913 aa15.5■□□□□ 0.07
LDLR-202ENST00000455727 F9P00740 461 aa15.5■□□□□ 0.07
LDLR-202ENST00000455727 DLDP09622 509 aaKnown RBP15.5■□□□□ 0.07
LDLR-202ENST00000455727 PGAM1P18669 254 aa15.5■□□□□ 0.07
LDLR-202ENST00000455727 PCSK1P29120 753 aa15.5■□□□□ 0.07
LDLR-202ENST00000455727 NIPAL4Q0D2K0 466 aa15.5■□□□□ 0.07
LDLR-202ENST00000455727 OVGP1Q12889 678 aa15.5■□□□□ 0.07
LDLR-202ENST00000455727 PREPLQ4J6C6 727 aaPredicted RBP15.5■□□□□ 0.07
LDLR-202ENST00000455727 TAF1BQ53T94 588 aaPredicted RBP15.5■□□□□ 0.07
LDLR-202ENST00000455727 INTS6LQ5JSJ4 861 aaKnown RBP15.5■□□□□ 0.07
LDLR-202ENST00000455727 GNASQ5JWF2 1037 aa15.5■□□□□ 0.07
LDLR-202ENST00000455727 ATG16L1Q676U5 607 aa15.5■□□□□ 0.07
LDLR-202ENST00000455727 ZNF449Q6P9G9 518 aa15.5■□□□□ 0.07
LDLR-202ENST00000455727 CLNKQ7Z7G1 428 aa15.5■□□□□ 0.07
LDLR-202ENST00000455727 ZNF567Q8N184 647 aa15.5■□□□□ 0.07
LDLR-202ENST00000455727 CCNYQ8ND76 341 aa15.5■□□□□ 0.07
LDLR-202ENST00000455727 ARNTL2Q8WYA1 636 aa15.5■□□□□ 0.07
LDLR-202ENST00000455727 CDKL2Q92772 493 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms