RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 IRF1P10914 325 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 CCDC130P13994 396 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 HNRNPLP14866 589 aaKnown RBP eCLIP4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 SDHBP21912 280 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 BCKDHBP21953 392 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 YWHAQP27348 245 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 GBP1P32455 592 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 CD68P34810 354 aaPredicted RBP4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 MAP3K7CLP57077 242 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 TNNC1P63316 161 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 NOP14P78316 857 aaKnown RBP4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 SLC7A9P82251 487 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 CREB5Q02930 508 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 ARID5AQ03989 594 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 SUZ12Q15022 739 aaKnown RBP4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 LRRC14Q15048 493 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 DHCR24Q15392 516 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 MAPRE1Q15691 268 aaKnown RBP4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 PLK5Q496M5 336 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 ZNF667Q5HYK9 610 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 N4BP2L1Q5TBK1 243 aaPredicted RBP4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 ANO7Q6IWH7 933 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 CNNM4Q6P4Q7 775 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 SCARA5Q6ZMJ2 495 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 CCDC81Q6ZN84 652 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 SYT13Q7L8C5 426 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 NUP93Q8N1F7 819 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 CAMKK1Q8N5S9 505 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 DEFB119Q8N690 84 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 ALLCQ8N6M5 410 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 C12orf29Q8N999 325 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 C12orf50Q8NA57 414 aaPredicted RBP4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 B3GALNT2Q8NCR0 500 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 KIAA0895Q8NCT3 520 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 NETO1Q8TDF5 533 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 PARD3BQ8TEW8 1205 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 USP33Q8TEY7 942 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 ATP2A3Q93084 1043 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 FBXO32Q969P5 355 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 SNX21Q969T3 373 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 TTLL2Q9BWV7 592 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 DUSP15Q9H1R2 295 aaPredicted RBP4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 CUEDC2Q9H467 287 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 SOX17Q9H6I2 414 aaPredicted RBP4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 MMRN2Q9H8L6 949 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 CFAP97Q9P2B7 532 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 HMGXB4Q9UGU5 601 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 NUDT5Q9UKK9 219 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 RCOR1Q9UKL0 485 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 CYP8B1Q9UNU6 501 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 MAPK8IP1Q9UQF2 711 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 EFR3BQ9Y2G0 817 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 CPQQ9Y646 472 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 DMXL1Q9Y485 3027 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 NCOR2Q9Y618 2525 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 NUMA1Q14980 2115 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 ZNF292O60281 2723 aa4.96□□□□□ -1.61
GTF3C3-208ENST00000455546 CCDC163A0A0D9SF12 145 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 C4orf47A7E2U8 309 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 PATE3B3GLJ2 98 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 SGK1O00141 431 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 MDM4O15151 490 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 GREM1O60565 184 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 LRP3O75074 770 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 EPN2O95208 641 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 KLF8O95600 359 aaPredicted RBP4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 NFATC1O95644 943 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 APBB3O95704 486 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 CAVIN2O95810 425 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 OLFM2O95897 454 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 OAS1P00973 400 aaKnown RBP4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 ADRB1P08588 477 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 FAM163BP0C2L3 166 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 SLFN14P0C7P3 912 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 PFKFB1P16118 471 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 LORP23490 312 aaPredicted RBP4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 ADORA2BP29275 332 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 ATICP31939 592 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 MPLP40238 635 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 WASP42768 502 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 DHPSP49366 369 aaPredicted RBP4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 NDST1P52848 882 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 SLC5A3P53794 718 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 SNRPFP62306 86 aaKnown RBP4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 IRX4P78413 519 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 KDSRQ06136 332 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 CRY1Q16526 586 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 BMT2Q1RMZ1 405 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 ANO4Q32M45 955 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 ZNF699Q32M78 642 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 FBXO43Q4G163 708 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 WIPI1Q5MNZ9 446 aaPredicted RBP4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 LY6G5CQ5SRR4 150 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 C1orf220Q5T0J3 134 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 HECTD3Q5T447 861 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 STPG1Q5TH74 334 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 IL31Q6EBC2 164 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 LINC00114Q6XXX2 140 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 TMEM25Q86YD3 366 aa4.96□□□□□ -1.62
GTF3C3-208ENST00000455546 HSCBQ8IWL3 235 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms