RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 CASQ1P31415 396 aa17.18■□□□□ 0.34
CCDC90B-202ENST00000455220 L1CAMP32004 1257 aa17.18■□□□□ 0.34
CCDC90B-202ENST00000455220 MLLT6P55198 1093 aaPredicted RBP17.18■□□□□ 0.34
CCDC90B-202ENST00000455220 PDK2Q15119 407 aa17.18■□□□□ 0.34
CCDC90B-202ENST00000455220 LEXMQ3ZCV2 418 aa17.18■□□□□ 0.34
CCDC90B-202ENST00000455220 ARTNQ5T4W7 220 aa17.18■□□□□ 0.34
CCDC90B-202ENST00000455220 VSIG1Q86XK7 387 aa17.18■□□□□ 0.34
CCDC90B-202ENST00000455220 CELF5Q8N6W0 485 aaKnown RBP17.18■□□□□ 0.34
CCDC90B-202ENST00000455220 RAPGEF5Q92565 580 aa17.18■□□□□ 0.34
CCDC90B-202ENST00000455220 KCTD15Q96SI1 283 aaPredicted RBP17.18■□□□□ 0.34
CCDC90B-202ENST00000455220 PRMT1Q99873 361 aaKnown RBP17.18■□□□□ 0.34
CCDC90B-202ENST00000455220 MAGEB5Q9BZ81 275 aa17.18■□□□□ 0.34
CCDC90B-202ENST00000455220 CARD9Q9H257 536 aa17.18■□□□□ 0.34
CCDC90B-202ENST00000455220 DHX35Q9H5Z1 703 aaKnown RBP17.18■□□□□ 0.34
CCDC90B-202ENST00000455220 PCDH18Q9HCL0 1135 aa17.18■□□□□ 0.34
CCDC90B-202ENST00000455220 KLHL11Q9NVR0 708 aa17.18■□□□□ 0.34
CCDC90B-202ENST00000455220 LSM7Q9UK45 103 aaKnown RBP17.18■□□□□ 0.34
CCDC90B-202ENST00000455220 AGO1Q9UL18 857 aaKnown RBP17.18■□□□□ 0.34
CCDC90B-202ENST00000455220 SNX12Q9UMY4 172 aa17.18■□□□□ 0.34
CCDC90B-202ENST00000455220 ZNF510Q9Y2H8 683 aa17.18■□□□□ 0.34
CCDC90B-202ENST00000455220 ZNF487B1APH4 448 aa17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 ZRANB2O95218 330 aaKnown RBP eCLIP17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 KRT1P04264 644 aa17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 LAMP2P13473 410 aa17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 PRLRP16471 622 aa17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 KDELR1P24390 212 aa17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 SLC11A2P49281 568 aa17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 DNA2P51530 1060 aa17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 ZNF135P52742 658 aaPredicted RBP17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 CDH6P55285 790 aa17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 AMPD2Q01433 879 aa17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 TAZQ16635 292 aa17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 FAM133BQ5BKY9 247 aaKnown RBP17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 MS4A13Q5J8X5 152 aa17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 MANEALQ5VSG8 457 aa17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 NADSYN1Q6IA69 706 aa17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 DENND1CQ8IV53 801 aa17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 FAM217AQ8IXS0 508 aa17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 RCOR2Q8IZ40 523 aa17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 PYROXD2Q8N2H3 581 aa17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 TSC1Q92574 1164 aa17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 RBM41Q96IZ5 413 aaKnown RBP17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 EPS15L1Q9UBC2 864 aa17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 OR12D3Q9UGF7 316 aa17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 SH3BP1Q9Y3L3 701 aa17.17■□□□□ 0.34
CCDC90B-202ENST00000455220 LRRD1A4D1F6 860 aa17.16■□□□□ 0.34
CCDC90B-202ENST00000455220 KCNK3O14649 394 aa17.16■□□□□ 0.34
CCDC90B-202ENST00000455220 CD48P09326 243 aa17.16■□□□□ 0.34
CCDC90B-202ENST00000455220 PYGMP11217 842 aa17.16■□□□□ 0.34
CCDC90B-202ENST00000455220 GBP2P32456 591 aaPredicted RBP17.16■□□□□ 0.34
CCDC90B-202ENST00000455220 DPYSL3Q14195 570 aa17.16■□□□□ 0.34
CCDC90B-202ENST00000455220 ADGRF1Q5T601 910 aa17.16■□□□□ 0.34
CCDC90B-202ENST00000455220 OTOP3Q7RTS5 596 aa17.16■□□□□ 0.34
CCDC90B-202ENST00000455220 MAP7D3Q8IWC1 876 aa17.16■□□□□ 0.34
CCDC90B-202ENST00000455220 ZNF683Q8IZ20 524 aa17.16■□□□□ 0.34
CCDC90B-202ENST00000455220 KCTD6Q8NC69 237 aa17.16■□□□□ 0.34
CCDC90B-202ENST00000455220 MAFAQ8NHW3 353 aaPredicted RBP17.16■□□□□ 0.34
CCDC90B-202ENST00000455220 FAF2Q96CS3 445 aa17.16■□□□□ 0.34
CCDC90B-202ENST00000455220 RSPRY1Q96DX4 576 aa17.16■□□□□ 0.34
CCDC90B-202ENST00000455220 OSBPL9Q96SU4 736 aa17.16■□□□□ 0.34
CCDC90B-202ENST00000455220 ZNF670Q9BS34 389 aa17.16■□□□□ 0.34
CCDC90B-202ENST00000455220 RCOR3Q9P2K3 495 aaPredicted RBP17.16■□□□□ 0.34
CCDC90B-202ENST00000455220 NEU3Q9UQ49 428 aa17.16■□□□□ 0.34
CCDC90B-202ENST00000455220 SNX10Q9Y5X0 201 aa17.16■□□□□ 0.34
CCDC90B-202ENST00000455220 KIF26AQ9ULI4 1882 aaPredicted RBP17.16■□□□□ 0.34
CCDC90B-202ENST00000455220 FAM72CH0Y354 149 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 GFRA2O00451 464 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 CES2O00748 559 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 TCP1P17987 556 aaKnown RBP17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 IL4RP24394 825 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 HOXC13P31276 330 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 HTR7P34969 479 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 PTPN7P35236 360 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 VIPR2P41587 438 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 COPS2P61201 443 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 AUHQ13825 339 aaKnown RBP17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 KRT81Q14533 505 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 SMAD2Q15796 467 aaKnown RBP17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 PPP6R3Q5H9R7 873 aaPredicted RBP17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 ZFYVE27Q5T4F4 411 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 FAM72AQ5TYM5 149 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 FAM72DQ6L9T8 149 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 MFSD7Q6UXD7 560 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 FAM72BQ86X60 149 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 E2F7Q96AV8 911 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 PBKQ96KB5 322 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 LRRC3BQ96PB8 259 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 PSMB7Q99436 277 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 SIK2Q9H0K1 926 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 PI4K2BG5E9Z4 385 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 LRIG2O94898 1065 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 TACR2P21452 398 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 SLC6A4P31645 630 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 GGCXP38435 758 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 CDKN2BP42772 138 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 HCAR3P49019 387 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 PPP2R5EQ16537 467 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 C5orf22Q49AR2 442 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 RAP1GAP2Q684P5 730 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 SPOCD1Q6ZMY3 1216 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms